RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ATOX1O00244 68 aa13.72□□□□□ -0.21
RNF4-207ENST00000506706 KRTAP13-1Q8IUC0 172 aa13.72□□□□□ -0.21
RNF4-207ENST00000506706 PLAC8Q9NZF1 115 aa13.72□□□□□ -0.21
RNF4-207ENST00000506706 ALMS1Q8TCU4 4167 aa13.71□□□□□ -0.22
RNF4-207ENST00000506706 SPRR1BP22528 89 aa13.7□□□□□ -0.22
RNF4-207ENST00000506706 SPRR4Q96PI1 79 aa13.69□□□□□ -0.22
RNF4-207ENST00000506706 IGLV8-61A0A075B6I0 122 aa13.68□□□□□ -0.22
RNF4-207ENST00000506706 CCDC179H3BU77 68 aa13.68□□□□□ -0.22
RNF4-207ENST00000506706 SCXQ7RTU7 201 aa13.67□□□□□ -0.22
RNF4-207ENST00000506706 IGFL1Q6UW32 110 aa13.65□□□□□ -0.22
RNF4-207ENST00000506706 CRYGAP11844 174 aa13.63□□□□□ -0.23
RNF4-207ENST00000506706 PSORS1C2Q9UIG4 136 aa13.62□□□□□ -0.23
RNF4-207ENST00000506706 BPY2O14599 106 aa13.6□□□□□ -0.23
RNF4-207ENST00000506706 A0A0G2JQZ4 141 aa13.6□□□□□ -0.23
RNF4-207ENST00000506706 FRAS1Q86XX4 4008 aa13.6□□□□□ -0.23
RNF4-207ENST00000506706 KRTAP10-2P60368 255 aa13.59□□□□□ -0.23
RNF4-207ENST00000506706 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
RNF4-207ENST00000506706 COX7CP15954 63 aa13.58□□□□□ -0.24
RNF4-207ENST00000506706 UQCRQO14949 82 aa13.57□□□□□ -0.24
RNF4-207ENST00000506706 SERP2Q8N6R1 65 aa13.54□□□□□ -0.24
RNF4-207ENST00000506706 ZNF706Q9Y5V0 76 aaPredicted RBP13.52□□□□□ -0.24
RNF4-207ENST00000506706 ZNF861PO60384 105 aa13.52□□□□□ -0.25
RNF4-207ENST00000506706 IGKV4-1P06312 121 aa13.52□□□□□ -0.25
RNF4-207ENST00000506706 Q8N9L7 120 aa13.52□□□□□ -0.25
RNF4-207ENST00000506706 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
RNF4-207ENST00000506706 LINC00483Q53H64 154 aa13.5□□□□□ -0.25
RNF4-207ENST00000506706 DNAH8Q96JB1 4490 aa13.5□□□□□ -0.25
RNF4-207ENST00000506706 FAM30AQ9NZY2 134 aa13.49□□□□□ -0.25
RNF4-207ENST00000506706 C9orf153Q5TBE3 101 aa13.49□□□□□ -0.25
RNF4-207ENST00000506706 A0A087WSZ3 146 aa13.48□□□□□ -0.25
RNF4-207ENST00000506706 DNAH11Q96DT5 4516 aa13.47□□□□□ -0.25
RNF4-207ENST00000506706 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
RNF4-207ENST00000506706 HYDINQ4G0P3 5121 aa13.45□□□□□ -0.26
RNF4-207ENST00000506706 DNAH5Q8TE73 4624 aa13.44□□□□□ -0.26
RNF4-207ENST00000506706 IGLV7-43P04211 117 aa13.44□□□□□ -0.26
RNF4-207ENST00000506706 SMIM20Q8N5G0 67 aa13.44□□□□□ -0.26
RNF4-207ENST00000506706 IGLV9-49A0A0B4J1Y8 123 aa13.43□□□□□ -0.26
RNF4-207ENST00000506706 Q6ZSA8 131 aa13.43□□□□□ -0.26
RNF4-207ENST00000506706 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
RNF4-207ENST00000506706 DSCR10P59022 87 aa13.41□□□□□ -0.26
RNF4-207ENST00000506706 TRAV7A0A075B6U4 112 aa13.4□□□□□ -0.26
RNF4-207ENST00000506706 RPL37AP61513 92 aaKnown RBP13.4□□□□□ -0.27
RNF4-207ENST00000506706 PKD1P98161 4303 aa13.39□□□□□ -0.27
RNF4-207ENST00000506706 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
RNF4-207ENST00000506706 K7EQZ3 153 aa13.35□□□□□ -0.27
RNF4-207ENST00000506706 DEFB116Q30KQ4 102 aa13.35□□□□□ -0.27
RNF4-207ENST00000506706 ANAPC11Q9NYG5 84 aa13.33□□□□□ -0.27
RNF4-207ENST00000506706 MOBPQ13875 183 aa13.32□□□□□ -0.28
RNF4-207ENST00000506706 SS18L2Q9UHA2 77 aa13.31□□□□□ -0.28
RNF4-207ENST00000506706 LCE6AA0A183 80 aa13.29□□□□□ -0.28
RNF4-207ENST00000506706 LINC00472Q9H8W2 130 aa13.29□□□□□ -0.28
RNF4-207ENST00000506706 C20orf197Q8N268 126 aa13.26□□□□□ -0.29
RNF4-207ENST00000506706 CYSTM1Q9H1C7 97 aa13.26□□□□□ -0.29
RNF4-207ENST00000506706 HRCT1Q6UXD1 115 aa13.25□□□□□ -0.29
RNF4-207ENST00000506706 OCR1Q9BZK8 76 aa13.24□□□□□ -0.29
RNF4-207ENST00000506706 LINC00336Q6ZUF6 198 aa13.24□□□□□ -0.29
RNF4-207ENST00000506706 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
RNF4-207ENST00000506706 SACSQ9NZJ4 4579 aa13.22□□□□□ -0.29
RNF4-207ENST00000506706 J3KT08 172 aa13.2□□□□□ -0.3
RNF4-207ENST00000506706 A8MWP4 228 aa13.2□□□□□ -0.3
RNF4-207ENST00000506706 PRR15Q8IV56 129 aa13.18□□□□□ -0.3
RNF4-207ENST00000506706 KLKP1Q107X0 134 aa13.16□□□□□ -0.3
RNF4-207ENST00000506706 Q96NJ1 140 aa13.16□□□□□ -0.3
RNF4-207ENST00000506706 SSBP3-AS1Q7Z2R9 100 aa13.14□□□□□ -0.31
RNF4-207ENST00000506706 TMEM258P61165 79 aa13.12□□□□□ -0.31
RNF4-207ENST00000506706 WFDC13Q8IUB5 93 aa13.12□□□□□ -0.31
RNF4-207ENST00000506706 SNURFQ9Y675 71 aa13.12□□□□□ -0.31
RNF4-207ENST00000506706 NDUFB1O75438 58 aa13.11□□□□□ -0.31
RNF4-207ENST00000506706 LRP1BQ9NZR2 4599 aa13.11□□□□□ -0.31
RNF4-207ENST00000506706 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
RNF4-207ENST00000506706 CD164Q04900 197 aa13.09□□□□□ -0.31
RNF4-207ENST00000506706 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
RNF4-207ENST00000506706 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
RNF4-207ENST00000506706 A0A1B0GVY2 172 aa13.07□□□□□ -0.32
RNF4-207ENST00000506706 CASC2Q6XLA1 102 aa13.07□□□□□ -0.32
RNF4-207ENST00000506706 A0A087X002 238 aa13.06□□□□□ -0.32
RNF4-207ENST00000506706 H7BZZ5 65 aa13.04□□□□□ -0.32
RNF4-207ENST00000506706 A0A0U1RQV1 116 aa13.03□□□□□ -0.32
RNF4-207ENST00000506706 KRTAP13-2Q52LG2 175 aa13.03□□□□□ -0.32
RNF4-207ENST00000506706 NDUFC1O43677 76 aa13.02□□□□□ -0.33
RNF4-207ENST00000506706 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.33
RNF4-207ENST00000506706 PKHD1P08F94 4074 aa13.01□□□□□ -0.33
RNF4-207ENST00000506706 MMP24-AS1A0A0U1RRL7 71 aa13.01□□□□□ -0.33
RNF4-207ENST00000506706 CDK2AP2O75956 126 aa13.01□□□□□ -0.33
RNF4-207ENST00000506706 KRTAP1-4P0C5Y4 121 aa13□□□□□ -0.33
RNF4-207ENST00000506706 C5orf47Q569G3 176 aa12.98□□□□□ -0.33
RNF4-207ENST00000506706 A0A1B0GVX0 72 aa12.97□□□□□ -0.33
RNF4-207ENST00000506706 hDV103S1A0JD37 113 aa12.95□□□□□ -0.34
RNF4-207ENST00000506706 IGHV6-1A0A0B4J1U7 121 aa12.94□□□□□ -0.34
RNF4-207ENST00000506706 ASB16-AS1Q495Z4 193 aa12.94□□□□□ -0.34
RNF4-207ENST00000506706 C8orf17Q9NRJ1 99 aa12.94□□□□□ -0.34
RNF4-207ENST00000506706 SPINK6Q6UWN8 80 aa12.93□□□□□ -0.34
RNF4-207ENST00000506706 FAM236DA0A1B0GTK5 79 aa12.93□□□□□ -0.34
RNF4-207ENST00000506706 FAM236CP0DP71 79 aa12.93□□□□□ -0.34
RNF4-207ENST00000506706 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
RNF4-207ENST00000506706 RYR2Q92736 4967 aa12.9□□□□□ -0.34
RNF4-207ENST00000506706 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
RNF4-207ENST00000506706 DYNC1H1Q14204 4646 aaKnown RBP12.89□□□□□ -0.35
RNF4-207ENST00000506706 MP68P56378 58 aa12.87□□□□□ -0.35
RNF4-207ENST00000506706 Q5XG85 94 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms