RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 S100A2P29034 98 aa5□□□□□ -1.61
PDLIM5-209ENST00000506632 DEFB105AQ8NG35 78 aa5□□□□□ -1.61
PDLIM5-209ENST00000506632 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
PDLIM5-209ENST00000506632 Q5XG85 94 aa4.99□□□□□ -1.61
PDLIM5-209ENST00000506632 HRCT1Q6UXD1 115 aa4.99□□□□□ -1.61
PDLIM5-209ENST00000506632 PRO1933Q9H354 126 aa4.99□□□□□ -1.61
PDLIM5-209ENST00000506632 HSBP1L1C9JCN9 74 aa4.97□□□□□ -1.61
PDLIM5-209ENST00000506632 NHP2Q9NX24 153 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-209ENST00000506632 A0A0G2JQZ4 141 aa4.96□□□□□ -1.62
PDLIM5-209ENST00000506632 H7C2G1 150 aa4.96□□□□□ -1.62
PDLIM5-209ENST00000506632 S100A6P06703 90 aa4.96□□□□□ -1.62
PDLIM5-209ENST00000506632 LINC00575Q6W349 94 aa4.96□□□□□ -1.62
PDLIM5-209ENST00000506632 COX8AP10176 69 aa4.94□□□□□ -1.62
PDLIM5-209ENST00000506632 VAMP3Q15836 100 aa4.94□□□□□ -1.62
PDLIM5-209ENST00000506632 C1orf195Q5TG92 126 aa4.94□□□□□ -1.62
PDLIM5-209ENST00000506632 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
PDLIM5-209ENST00000506632 DLEU1O43261 78 aa4.93□□□□□ -1.62
PDLIM5-209ENST00000506632 Q6ZQY7 126 aa4.93□□□□□ -1.62
PDLIM5-209ENST00000506632 IGLV8-61A0A075B6I0 122 aa4.92□□□□□ -1.62
PDLIM5-209ENST00000506632 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
PDLIM5-209ENST00000506632 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
PDLIM5-209ENST00000506632 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
PDLIM5-209ENST00000506632 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
PDLIM5-209ENST00000506632 F8WEM9 126 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 BVES-AS1Q5T3Y7 98 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 Q6JHZ5 121 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 C12orf57Q99622 126 aa4.9□□□□□ -1.63
PDLIM5-209ENST00000506632 PCOTHQ58A44 107 aa4.89□□□□□ -1.63
PDLIM5-209ENST00000506632 PPDPFLQ8WWR9 84 aa4.89□□□□□ -1.63
PDLIM5-209ENST00000506632 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
PDLIM5-209ENST00000506632 TCL1BO95988 128 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 CFC1BP0CG36 223 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 CFC1P0CG37 223 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
PDLIM5-209ENST00000506632 TRBV7-7A0A0K0K1E9 115 aa4.87□□□□□ -1.63
PDLIM5-209ENST00000506632 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
PDLIM5-209ENST00000506632 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
PDLIM5-209ENST00000506632 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-209ENST00000506632 SPATA45Q537H7 98 aa4.86□□□□□ -1.63
PDLIM5-209ENST00000506632 RAB37Q96AX2 223 aa4.84□□□□□ -1.63
PDLIM5-209ENST00000506632 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
PDLIM5-209ENST00000506632 VAMP8Q9BV40 100 aa4.84□□□□□ -1.63
PDLIM5-209ENST00000506632 H0YGX0 51 aa4.83□□□□□ -1.64
PDLIM5-209ENST00000506632 H3BUT2 72 aa4.83□□□□□ -1.64
PDLIM5-209ENST00000506632 CEND1Q8N111 149 aa4.83□□□□□ -1.64
PDLIM5-209ENST00000506632 SNHG12Q9BXW3 62 aa4.83□□□□□ -1.64
PDLIM5-209ENST00000506632 Q6Q795 121 aa4.82□□□□□ -1.64
PDLIM5-209ENST00000506632 A0A1B0GX51 115 aa4.81□□□□□ -1.64
PDLIM5-209ENST00000506632 FXYD2P54710 66 aa4.81□□□□□ -1.64
PDLIM5-209ENST00000506632 MT1HP80294 61 aa4.81□□□□□ -1.64
PDLIM5-209ENST00000506632 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-209ENST00000506632 PRO1854Q9UHT4 67 aa4.8□□□□□ -1.64
PDLIM5-209ENST00000506632 LST1O00453 97 aa4.79□□□□□ -1.64
PDLIM5-209ENST00000506632 SNCGO76070 127 aa4.79□□□□□ -1.64
PDLIM5-209ENST00000506632 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
PDLIM5-209ENST00000506632 TEN1Q86WV5 123 aa4.78□□□□□ -1.64
PDLIM5-209ENST00000506632 OBSCN-AS1Q96MR7 158 aa4.78□□□□□ -1.64
PDLIM5-209ENST00000506632 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
PDLIM5-209ENST00000506632 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
PDLIM5-209ENST00000506632 H3BMG7 143 aa4.76□□□□□ -1.65
PDLIM5-209ENST00000506632 HSD52Q0P140 79 aa4.76□□□□□ -1.65
PDLIM5-209ENST00000506632 Q96NJ1 140 aa4.76□□□□□ -1.65
PDLIM5-209ENST00000506632 A0A087WSZ3 146 aa4.75□□□□□ -1.65
PDLIM5-209ENST00000506632 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
PDLIM5-209ENST00000506632 FABP2P12104 132 aa4.74□□□□□ -1.65
PDLIM5-209ENST00000506632 K7ERJ3 54 aa4.73□□□□□ -1.65
PDLIM5-209ENST00000506632 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-209ENST00000506632 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
PDLIM5-209ENST00000506632 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-209ENST00000506632 A8MUU9 505 aa4.72□□□□□ -1.65
PDLIM5-209ENST00000506632 ATP11AUNQ6ZP68 121 aa4.72□□□□□ -1.65
PDLIM5-209ENST00000506632 ORMDL1Q9P0S3 153 aa4.72□□□□□ -1.65
PDLIM5-209ENST00000506632 TRBV7-4A0A0J9YYF1 115 aa4.71□□□□□ -1.66
PDLIM5-209ENST00000506632 H3BQ85 93 aa4.71□□□□□ -1.66
PDLIM5-209ENST00000506632 UQCR10Q9UDW1 63 aa4.71□□□□□ -1.66
PDLIM5-209ENST00000506632 DNAL4O96015 105 aa4.7□□□□□ -1.66
PDLIM5-209ENST00000506632 COX6CP09669 75 aa4.7□□□□□ -1.66
PDLIM5-209ENST00000506632 PSMB2P49721 201 aa4.7□□□□□ -1.66
PDLIM5-209ENST00000506632 COX6B2Q6YFQ2 88 aa4.7□□□□□ -1.66
PDLIM5-209ENST00000506632 TMEM256-PLSCR3K7ERE1 68 aa4.69□□□□□ -1.66
PDLIM5-209ENST00000506632 ANKRD29Q8N6D5 301 aa4.69□□□□□ -1.66
PDLIM5-209ENST00000506632 PCP4L1A6NKN8 68 aa4.68□□□□□ -1.66
PDLIM5-209ENST00000506632 DSCR10P59022 87 aa4.68□□□□□ -1.66
PDLIM5-209ENST00000506632 M0R2T5 61 aa4.67□□□□□ -1.66
PDLIM5-209ENST00000506632 TRACP01848 142 aa4.67□□□□□ -1.66
PDLIM5-209ENST00000506632 SIGMAR1Q99720 223 aa4.67□□□□□ -1.66
PDLIM5-209ENST00000506632 A0A1B0GV72 72 aa4.66□□□□□ -1.66
PDLIM5-209ENST00000506632 KRTAP16-1A8MUX0 517 aa4.66□□□□□ -1.66
PDLIM5-209ENST00000506632 Q6ZVQ6 151 aa4.66□□□□□ -1.66
PDLIM5-209ENST00000506632 LINC00472Q9H8W2 130 aa4.66□□□□□ -1.66
PDLIM5-209ENST00000506632 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
PDLIM5-209ENST00000506632 CCKP06307 115 aa4.65□□□□□ -1.67
PDLIM5-209ENST00000506632 IGKV4-1P06312 121 aa4.65□□□□□ -1.67
PDLIM5-209ENST00000506632 LINC00313P59037 77 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms