RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TCEAL7Q9BRU2 100 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 NIT2Q9NQR4 276 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 MED9Q9NWA0 146 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 LOC107984640A0A0U1RRK4 108 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 KANTRA0A1W2PQU2 76 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 C7orf77A4D0Y5 90 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 I3L3M4 83 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 UBE2D1P51668 147 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 RPL39P62891 51 aaKnown RBP1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 C9orf62Q8N4C0 152 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 NUP35Q8NFH5 326 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 NAA38Q9BRA0 125 aaKnown RBP1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 TMEM126AQ9H061 195 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 MANBALQ9NQG1 85 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 CDC42SE2Q9NRR3 84 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
TRAPPC11-205ENST00000506426 A0A1B0GV72 72 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 HIGD1CA8MV81 97 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 UMAD1C9J7I0 102 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 F2Z2F3 143 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 TMEM256-PLSCR3K7ERE1 68 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 M0R378 163 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 ZNF25P17030 456 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 FCER1GP30273 86 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 EIF5AL1Q6IS14 154 aaKnown RBP1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 C2orf82Q6UX34 121 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 DIRC1Q969H9 104 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 CNFNQ9BYD5 112 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 ST20Q9HBF5 79 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 LINC00474Q9P2X8 69 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 UBE2D4Q9Y2X8 147 aa1.29□□□□□ -2.2
TRAPPC11-205ENST00000506426 TRBV27A0A0K0K1C4 114 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 NDUFA1O15239 70 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 TIMM17BO60830 172 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 POLR2KP53803 58 aaKnown RBP1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 MRPL54Q6P161 138 aaKnown RBP1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 ALKAL2Q6UX46 152 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 SOSTDC1Q6X4U4 206 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 SMIM15Q7Z3B0 74 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 PLEKHB2Q96CS7 222 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 C14orf132Q9NPU4 83 aa1.28□□□□□ -2.2
TRAPPC11-205ENST00000506426 A0A1B0GUT8 65 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 D6R8Y8 96 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TRGC2P03986 189 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 HBBP68871 147 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 PRLHP81277 87 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 ADIRFQ15847 76 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TEX261Q6UWH6 196 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TSKUQ8WUA8 353 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 SMIM7Q9BQ49 75 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 SMIM2Q9BVW6 85 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TMEM191AQ9H0A3 160 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 MRPL35Q9NZE8 188 aaKnown RBP1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TOMM7Q9P0U1 55 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 LAMTOR3Q9UHA4 124 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 V9GYV3 84 aa1.27□□□□□ -2.21
TRAPPC11-205ENST00000506426 TRAV12-1A0A0B4J245 112 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 ZNF727A8MUV8 499 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 CKS2P33552 79 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 SPANXA1Q9NS26 97 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 C22orf24Q9Y442 160 aa1.26□□□□□ -2.21
TRAPPC11-205ENST00000506426 TRBV30A0A0K0K1B3 111 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 BCE1O60756 84 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 IFI27P40305 119 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 TCTE3Q8IZS6 198 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 TMEM141Q96I45 108 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 CYSTM1Q9H1C7 97 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 CDKN2A-AS1Q9UH64 79 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 NAT8BQ9UHF3 227 aa1.25□□□□□ -2.21
TRAPPC11-205ENST00000506426 SMIM27A0A1W2PRY6 76 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 F8VRH5 84 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 SPINK8P0C7L1 97 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 ADCYAP1P18509 176 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 CKS1BP61024 79 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 MRPS36P82909 103 aaKnown RBP1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 AKAP14Q86UN6 197 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 Q8IZM0 81 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 TMEM254Q8TBM7 123 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 PRELID3AQ96N28 172 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 C20orf78Q9BR46 151 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 C2orf88Q9BSF0 95 aa1.24□□□□□ -2.21
TRAPPC11-205ENST00000506426 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 IGKV2D-26A0A0A0MRZ7 120 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 NUPR1O60356 82 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 PPP1R17O96001 155 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 COX7B2Q8TF08 81 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 AMELXQ99217 191 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
TRAPPC11-205ENST00000506426 USH2AO75445 5202 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 IGKV3D-7A0A0C4DH55 119 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 IGIPA6NJ69 53 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 NCR3O14931 201 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 HIST1H2BKO60814 126 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 S100A8P05109 93 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 HIST1H2BJP06899 126 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms