RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 FAT4Q6V0I7 4981 aa12.46□□□□□ -0.42
HMGB2-204ENST00000506267 CEND1Q8N111 149 aa12.44□□□□□ -0.42
HMGB2-204ENST00000506267 ASB16-AS1Q495Z4 193 aa12.43□□□□□ -0.42
HMGB2-204ENST00000506267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.43□□□□□ -0.42
HMGB2-204ENST00000506267 RAB37Q96AX2 223 aa12.43□□□□□ -0.42
HMGB2-204ENST00000506267 IGLV8-61A0A075B6I0 122 aa12.4□□□□□ -0.42
HMGB2-204ENST00000506267 XP32Q5T750 250 aa12.4□□□□□ -0.42
HMGB2-204ENST00000506267 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
HMGB2-204ENST00000506267 F8WEM9 126 aa12.38□□□□□ -0.43
HMGB2-204ENST00000506267 FXYD2P54710 66 aa12.38□□□□□ -0.43
HMGB2-204ENST00000506267 A0A0U1RQV1 116 aa12.37□□□□□ -0.43
HMGB2-204ENST00000506267 C1orf195Q5TG92 126 aa12.37□□□□□ -0.43
HMGB2-204ENST00000506267 PPDPFLQ8WWR9 84 aa12.36□□□□□ -0.43
HMGB2-204ENST00000506267 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
HMGB2-204ENST00000506267 OCIAD2Q56VL3 154 aa12.35□□□□□ -0.43
HMGB2-204ENST00000506267 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
HMGB2-204ENST00000506267 H0YGX0 51 aa12.34□□□□□ -0.43
HMGB2-204ENST00000506267 Q6JHZ5 121 aa12.34□□□□□ -0.43
HMGB2-204ENST00000506267 TMEM238LA0A1B0GVL6 79 aa12.33□□□□□ -0.44
HMGB2-204ENST00000506267 A6NJY4 79 aa12.33□□□□□ -0.44
HMGB2-204ENST00000506267 SEC61BP60468 96 aaKnown RBP12.33□□□□□ -0.44
HMGB2-204ENST00000506267 IGFL1Q6UW32 110 aa12.33□□□□□ -0.44
HMGB2-204ENST00000506267 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
HMGB2-204ENST00000506267 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
HMGB2-204ENST00000506267 HSD52Q0P140 79 aa12.29□□□□□ -0.44
HMGB2-204ENST00000506267 SNHG12Q9BXW3 62 aa12.29□□□□□ -0.44
HMGB2-204ENST00000506267 C9orf92A6NGG3 77 aa12.28□□□□□ -0.44
HMGB2-204ENST00000506267 TCL1BO95988 128 aa12.27□□□□□ -0.45
HMGB2-204ENST00000506267 LCE2AQ5TA79 106 aaPredicted RBP12.27□□□□□ -0.45
HMGB2-204ENST00000506267 TRBV7-7A0A0K0K1E9 115 aa12.26□□□□□ -0.45
HMGB2-204ENST00000506267 H3BUT2 72 aa12.25□□□□□ -0.45
HMGB2-204ENST00000506267 TRIAP1O43715 76 aa12.25□□□□□ -0.45
HMGB2-204ENST00000506267 A0A1B0GX51 115 aa12.24□□□□□ -0.45
HMGB2-204ENST00000506267 SNCGO76070 127 aa12.24□□□□□ -0.45
HMGB2-204ENST00000506267 UQCR10Q9UDW1 63 aa12.24□□□□□ -0.45
HMGB2-204ENST00000506267 K7ERJ3 54 aa12.22□□□□□ -0.45
HMGB2-204ENST00000506267 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
HMGB2-204ENST00000506267 Q6Q795 121 aa12.16□□□□□ -0.46
HMGB2-204ENST00000506267 PCOTHQ58A44 107 aa12.15□□□□□ -0.46
HMGB2-204ENST00000506267 H3BMG7 143 aa12.11□□□□□ -0.47
HMGB2-204ENST00000506267 GHRHP01286 108 aa12.11□□□□□ -0.47
HMGB2-204ENST00000506267 FABP2P12104 132 aa12.11□□□□□ -0.47
HMGB2-204ENST00000506267 PSMB2P49721 201 aa12.11□□□□□ -0.47
HMGB2-204ENST00000506267 TEN1Q86WV5 123 aa12.1□□□□□ -0.47
HMGB2-204ENST00000506267 COX6CP09669 75 aa12.07□□□□□ -0.48
HMGB2-204ENST00000506267 RPL37P61927 97 aaKnown RBP12.07□□□□□ -0.48
HMGB2-204ENST00000506267 LST1O00453 97 aa12.06□□□□□ -0.48
HMGB2-204ENST00000506267 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
HMGB2-204ENST00000506267 DNAL4O96015 105 aa12.05□□□□□ -0.48
HMGB2-204ENST00000506267 A0A1W2PNM2 257 aa12.03□□□□□ -0.48
HMGB2-204ENST00000506267 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
HMGB2-204ENST00000506267 A0A087WSZ3 146 aa12.02□□□□□ -0.49
HMGB2-204ENST00000506267 H3BQ85 93 aa12.02□□□□□ -0.49
HMGB2-204ENST00000506267 KRTAP19-2Q3LHN2 52 aa12.02□□□□□ -0.49
HMGB2-204ENST00000506267 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
HMGB2-204ENST00000506267 TMEM256-PLSCR3K7ERE1 68 aa12□□□□□ -0.49
HMGB2-204ENST00000506267 Q96NJ1 140 aa11.99□□□□□ -0.49
HMGB2-204ENST00000506267 TRACP01848 142 aa11.98□□□□□ -0.49
HMGB2-204ENST00000506267 OBSCN-AS1Q96MR7 158 aa11.97□□□□□ -0.49
HMGB2-204ENST00000506267 SMIM6P0DI80 62 aa11.96□□□□□ -0.49
HMGB2-204ENST00000506267 ANKRD29Q8N6D5 301 aa11.96□□□□□ -0.49
HMGB2-204ENST00000506267 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
HMGB2-204ENST00000506267 UBE2V1Q13404 147 aa11.95□□□□□ -0.5
HMGB2-204ENST00000506267 A0A1B0GV72 72 aa11.94□□□□□ -0.5
HMGB2-204ENST00000506267 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
HMGB2-204ENST00000506267 Q75L30 129 aa11.91□□□□□ -0.5
HMGB2-204ENST00000506267 M0R143 59 aa11.9□□□□□ -0.5
HMGB2-204ENST00000506267 CCKP06307 115 aa11.85□□□□□ -0.51
HMGB2-204ENST00000506267 NAA38Q9BRA0 125 aaKnown RBP11.84□□□□□ -0.51
HMGB2-204ENST00000506267 BAALC-AS2P0C853 105 aa11.83□□□□□ -0.52
HMGB2-204ENST00000506267 C20orf166-AS1Q96NR2 134 aa11.83□□□□□ -0.52
HMGB2-204ENST00000506267 KRTAP9-2Q9BYQ4 174 aa11.82□□□□□ -0.52
HMGB2-204ENST00000506267 LOC105371267A0A1B0GV96 52 aa11.81□□□□□ -0.52
HMGB2-204ENST00000506267 RBM3P98179 157 aaKnown RBP11.81□□□□□ -0.52
HMGB2-204ENST00000506267 LINC00472Q9H8W2 130 aa11.81□□□□□ -0.52
HMGB2-204ENST00000506267 A8MUU9 505 aa11.8□□□□□ -0.52
HMGB2-204ENST00000506267 MT1HP80294 61 aa11.8□□□□□ -0.52
HMGB2-204ENST00000506267 ATP11AUNQ6ZP68 121 aa11.8□□□□□ -0.52
HMGB2-204ENST00000506267 SIGMAR1Q99720 223 aa11.79□□□□□ -0.52
HMGB2-204ENST00000506267 IGKV4-1P06312 121 aa11.78□□□□□ -0.52
HMGB2-204ENST00000506267 DSCR10P59022 87 aa11.78□□□□□ -0.52
HMGB2-204ENST00000506267 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
HMGB2-204ENST00000506267 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
HMGB2-204ENST00000506267 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
HMGB2-204ENST00000506267 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
HMGB2-204ENST00000506267 VPS25Q9BRG1 176 aa11.73□□□□□ -0.53
HMGB2-204ENST00000506267 FLGP20930 4061 aaPredicted RBP11.73□□□□□ -0.53
HMGB2-204ENST00000506267 KRTAP16-1A8MUX0 517 aa11.72□□□□□ -0.53
HMGB2-204ENST00000506267 LINC00313P59037 77 aa11.71□□□□□ -0.53
HMGB2-204ENST00000506267 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.53
HMGB2-204ENST00000506267 C9JAW5 83 aa11.7□□□□□ -0.54
HMGB2-204ENST00000506267 BATFQ16520 125 aa11.67□□□□□ -0.54
HMGB2-204ENST00000506267 JMJD7-PLA2G4BH0Y9G9 81 aa11.65□□□□□ -0.54
HMGB2-204ENST00000506267 Q6ZQT0 140 aa11.65□□□□□ -0.54
HMGB2-204ENST00000506267 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
HMGB2-204ENST00000506267 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
HMGB2-204ENST00000506267 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
HMGB2-204ENST00000506267 COX6B2Q6YFQ2 88 aa11.63□□□□□ -0.55
HMGB2-204ENST00000506267 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
HMGB2-204ENST00000506267 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms