RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 LY6G6CO95867 125 aa3.52□□□□□ -1.85
LINC01340-201ENST00000504012 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
LINC01340-201ENST00000504012 ANKRD11Q6UB99 2663 aaPredicted RBP3.52□□□□□ -1.85
LINC01340-201ENST00000504012 ITPR1Q14643 2758 aa3.51□□□□□ -1.85
LINC01340-201ENST00000504012 Q5W150 140 aa3.51□□□□□ -1.85
LINC01340-201ENST00000504012 LINC00304Q8N9R0 145 aa3.51□□□□□ -1.85
LINC01340-201ENST00000504012 CSPG4Q6UVK1 2322 aa3.51□□□□□ -1.85
LINC01340-201ENST00000504012 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
LINC01340-201ENST00000504012 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
LINC01340-201ENST00000504012 NCOR2Q9Y618 2525 aa3.5□□□□□ -1.85
LINC01340-201ENST00000504012 IGKV2-30P06310 120 aa3.5□□□□□ -1.85
LINC01340-201ENST00000504012 PRLHP81277 87 aa3.5□□□□□ -1.85
LINC01340-201ENST00000504012 ANAPC11Q9NYG5 84 aa3.5□□□□□ -1.85
LINC01340-201ENST00000504012 OTOGLQ3ZCN5 2332 aa3.5□□□□□ -1.85
LINC01340-201ENST00000504012 KMT2BQ9UMN6 2715 aaPredicted RBP3.5□□□□□ -1.85
LINC01340-201ENST00000504012 TLN1Q9Y490 2541 aaKnown RBP3.49□□□□□ -1.85
LINC01340-201ENST00000504012 NUPR2A6NF83 97 aa3.49□□□□□ -1.85
LINC01340-201ENST00000504012 HTN3P15516 51 aa3.49□□□□□ -1.85
LINC01340-201ENST00000504012 DEFB135Q30KP9 77 aa3.49□□□□□ -1.85
LINC01340-201ENST00000504012 MYO15AQ9UKN7 3530 aa3.49□□□□□ -1.85
LINC01340-201ENST00000504012 NBASA2RRP1 2371 aa3.48□□□□□ -1.85
LINC01340-201ENST00000504012 CELSR3Q9NYQ7 3312 aa3.48□□□□□ -1.85
LINC01340-201ENST00000504012 ZFHX4Q86UP3 3567 aa3.48□□□□□ -1.85
LINC01340-201ENST00000504012 LRBAP50851 2863 aa3.47□□□□□ -1.85
LINC01340-201ENST00000504012 PANO1I0J062 215 aa3.47□□□□□ -1.85
LINC01340-201ENST00000504012 DEFB4AO15263 64 aa3.47□□□□□ -1.85
LINC01340-201ENST00000504012 KRTAP13-1Q8IUC0 172 aa3.47□□□□□ -1.85
LINC01340-201ENST00000504012 ANKRD17O75179 2603 aaKnown RBP3.47□□□□□ -1.85
LINC01340-201ENST00000504012 TLN2Q9Y4G6 2542 aa3.46□□□□□ -1.85
LINC01340-201ENST00000504012 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
LINC01340-201ENST00000504012 ATRXP46100 2492 aa3.46□□□□□ -1.86
LINC01340-201ENST00000504012 KRTAP11-1Q8IUC1 163 aa3.46□□□□□ -1.86
LINC01340-201ENST00000504012 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
LINC01340-201ENST00000504012 DCHS1Q96JQ0 3298 aa3.46□□□□□ -1.86
LINC01340-201ENST00000504012 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
LINC01340-201ENST00000504012 K7EIL1 84 aa3.45□□□□□ -1.86
LINC01340-201ENST00000504012 SETXQ7Z333 2677 aaKnown RBP3.45□□□□□ -1.86
LINC01340-201ENST00000504012 SPENQ96T58 3664 aaKnown RBP3.45□□□□□ -1.86
LINC01340-201ENST00000504012 ADGRG4Q8IZF6 3080 aa3.44□□□□□ -1.86
LINC01340-201ENST00000504012 A0A096LNI7 61 aa3.43□□□□□ -1.86
LINC01340-201ENST00000504012 Q6ZSA8 131 aa3.43□□□□□ -1.86
LINC01340-201ENST00000504012 WWC2-AS2Q96NR7 200 aa3.43□□□□□ -1.86
LINC01340-201ENST00000504012 H0YAA0 97 aa3.42□□□□□ -1.86
LINC01340-201ENST00000504012 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
LINC01340-201ENST00000504012 RIF1Q5UIP0 2472 aaKnown RBP3.42□□□□□ -1.86
LINC01340-201ENST00000504012 JMJD1CQ15652 2540 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 HIVEP3Q5T1R4 2406 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 GVINP1Q7Z2Y8 2422 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 SPTBN4Q9H254 2564 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 A0A087WTM6 91 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 A0A1B0GU33 70 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 DEFB113Q30KQ7 82 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 C14orf177Q52M58 125 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 DEFB123Q8N688 67 aa3.41□□□□□ -1.86
LINC01340-201ENST00000504012 TENM2Q9NT68 2774 aa3.4□□□□□ -1.86
LINC01340-201ENST00000504012 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
LINC01340-201ENST00000504012 MAPK1IP1LQ8NDC0 245 aa3.4□□□□□ -1.87
LINC01340-201ENST00000504012 CEP295Q9C0D2 2601 aa3.4□□□□□ -1.87
LINC01340-201ENST00000504012 APCP25054 2843 aa3.4□□□□□ -1.87
LINC01340-201ENST00000504012 MYO9AB2RTY4 2548 aa3.4□□□□□ -1.87
LINC01340-201ENST00000504012 CIRBP-AS1Q8TBR5 109 aa3.39□□□□□ -1.87
LINC01340-201ENST00000504012 PTPN13Q12923 2485 aa3.39□□□□□ -1.87
LINC01340-201ENST00000504012 FN1P02751 2386 aaKnown RBP3.39□□□□□ -1.87
LINC01340-201ENST00000504012 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
LINC01340-201ENST00000504012 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
LINC01340-201ENST00000504012 CELSR2Q9HCU4 2923 aa3.38□□□□□ -1.87
LINC01340-201ENST00000504012 CELSR1Q9NYQ6 3014 aa3.38□□□□□ -1.87
LINC01340-201ENST00000504012 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
LINC01340-201ENST00000504012 COX6B2Q6YFQ2 88 aa3.37□□□□□ -1.87
LINC01340-201ENST00000504012 ZFYVE26Q68DK2 2539 aa3.37□□□□□ -1.87
LINC01340-201ENST00000504012 IGF2RP11717 2491 aa3.36□□□□□ -1.87
LINC01340-201ENST00000504012 SSBP3-AS1Q7Z2R9 100 aa3.36□□□□□ -1.87
LINC01340-201ENST00000504012 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
LINC01340-201ENST00000504012 LOC400499M0QZD8 3231 aa3.35□□□□□ -1.87
LINC01340-201ENST00000504012 KRTAP10-3P60369 221 aa3.35□□□□□ -1.87
LINC01340-201ENST00000504012 BOD1L1Q8NFC6 3051 aa3.35□□□□□ -1.87
LINC01340-201ENST00000504012 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.87
LINC01340-201ENST00000504012 ASH1LQ9NR48 2969 aaKnown RBP3.34□□□□□ -1.87
LINC01340-201ENST00000504012 DMXL1Q9Y485 3027 aa3.33□□□□□ -1.88
LINC01340-201ENST00000504012 HIVEP2P31629 2446 aa3.33□□□□□ -1.88
LINC01340-201ENST00000504012 BDP1A6H8Y1 2624 aa3.33□□□□□ -1.88
LINC01340-201ENST00000504012 TEX15Q9BXT5 2789 aa3.31□□□□□ -1.88
LINC01340-201ENST00000504012 ZNF292O60281 2723 aa3.31□□□□□ -1.88
LINC01340-201ENST00000504012 GCN1Q92616 2671 aaKnown RBP3.31□□□□□ -1.88
LINC01340-201ENST00000504012 OTOGQ6ZRI0 2925 aa3.3□□□□□ -1.88
LINC01340-201ENST00000504012 MXRA5Q9NR99 2828 aa3.3□□□□□ -1.88
LINC01340-201ENST00000504012 BSNQ9UPA5 3926 aa3.3□□□□□ -1.88
LINC01340-201ENST00000504012 USP9XQ93008 2570 aaPredicted RBP3.3□□□□□ -1.88
LINC01340-201ENST00000504012 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
LINC01340-201ENST00000504012 USP9YO00507 2555 aaPredicted RBP3.3□□□□□ -1.88
LINC01340-201ENST00000504012 DOPEY1Q5JWR5 2465 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 F8P00451 2351 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 NBPF19A0A087WUL8 3843 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 SPINK6Q6UWN8 80 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 Q8N1X5 172 aa3.29□□□□□ -1.88
LINC01340-201ENST00000504012 ASPMQ8IZT6 3477 aa3.28□□□□□ -1.88
LINC01340-201ENST00000504012 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
LINC01340-201ENST00000504012 KRTAP1-1Q07627 177 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms