RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 Q6Q795 121 aa7.31□□□□□ -1.24
POLR2J3-207ENST00000503564 PCP2Q8IVA1 136 aa7.31□□□□□ -1.24
POLR2J3-207ENST00000503564 KRTDAPP60985 99 aa7.3□□□□□ -1.24
POLR2J3-207ENST00000503564 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
POLR2J3-207ENST00000503564 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
POLR2J3-207ENST00000503564 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
POLR2J3-207ENST00000503564 OBSCN-AS1Q96MR7 158 aa7.3□□□□□ -1.24
POLR2J3-207ENST00000503564 Q6JHZ5 121 aa7.29□□□□□ -1.24
POLR2J3-207ENST00000503564 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
POLR2J3-207ENST00000503564 ATP11AUNQ6ZP68 121 aa7.29□□□□□ -1.24
POLR2J3-207ENST00000503564 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
POLR2J3-207ENST00000503564 Q6ZQY7 126 aa7.28□□□□□ -1.24
POLR2J3-207ENST00000503564 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
POLR2J3-207ENST00000503564 COA6Q5JTJ3 125 aaKnown RBP7.27□□□□□ -1.25
POLR2J3-207ENST00000503564 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
POLR2J3-207ENST00000503564 C20orf202A1L168 122 aa7.26□□□□□ -1.25
POLR2J3-207ENST00000503564 CFC1P0CG37 223 aa7.25□□□□□ -1.25
POLR2J3-207ENST00000503564 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
POLR2J3-207ENST00000503564 VAMP3Q15836 100 aa7.24□□□□□ -1.25
POLR2J3-207ENST00000503564 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
POLR2J3-207ENST00000503564 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
POLR2J3-207ENST00000503564 Q96NJ1 140 aa7.21□□□□□ -1.26
POLR2J3-207ENST00000503564 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
POLR2J3-207ENST00000503564 USH2AO75445 5202 aa7.2□□□□□ -1.26
POLR2J3-207ENST00000503564 LST1O00453 97 aa7.2□□□□□ -1.26
POLR2J3-207ENST00000503564 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.2□□□□□ -1.26
POLR2J3-207ENST00000503564 A8MUU9 505 aa7.19□□□□□ -1.26
POLR2J3-207ENST00000503564 H3BUT2 72 aa7.18□□□□□ -1.26
POLR2J3-207ENST00000503564 PPDPFLQ8WWR9 84 aa7.18□□□□□ -1.26
POLR2J3-207ENST00000503564 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
POLR2J3-207ENST00000503564 MT2AP02795 61 aa7.15□□□□□ -1.26
POLR2J3-207ENST00000503564 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
POLR2J3-207ENST00000503564 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
POLR2J3-207ENST00000503564 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
POLR2J3-207ENST00000503564 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
POLR2J3-207ENST00000503564 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
POLR2J3-207ENST00000503564 C12orf57Q99622 126 aa7.12□□□□□ -1.27
POLR2J3-207ENST00000503564 LCE2BO14633 110 aa7.1□□□□□ -1.27
POLR2J3-207ENST00000503564 MT1FP04733 61 aa7.1□□□□□ -1.27
POLR2J3-207ENST00000503564 TEN1Q86WV5 123 aa7.1□□□□□ -1.27
POLR2J3-207ENST00000503564 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
POLR2J3-207ENST00000503564 A0A087WSZ3 146 aa7.08□□□□□ -1.28
POLR2J3-207ENST00000503564 DSCR10P59022 87 aa7.08□□□□□ -1.28
POLR2J3-207ENST00000503564 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
POLR2J3-207ENST00000503564 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
POLR2J3-207ENST00000503564 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
POLR2J3-207ENST00000503564 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
POLR2J3-207ENST00000503564 NDUFV3P56181 108 aaKnown RBP7.05□□□□□ -1.28
POLR2J3-207ENST00000503564 MPLKIPQ8TAP9 179 aa7.05□□□□□ -1.28
POLR2J3-207ENST00000503564 FAM218AQ96MZ4 157 aa7.05□□□□□ -1.28
POLR2J3-207ENST00000503564 HIST1H2BLQ99880 126 aa7.05□□□□□ -1.28
POLR2J3-207ENST00000503564 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
POLR2J3-207ENST00000503564 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
POLR2J3-207ENST00000503564 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
POLR2J3-207ENST00000503564 HRES1P13985 223 aa7.03□□□□□ -1.28
POLR2J3-207ENST00000503564 HIST1H4GQ99525 98 aa7.03□□□□□ -1.28
POLR2J3-207ENST00000503564 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
POLR2J3-207ENST00000503564 A0A1W2PNM2 257 aa7□□□□□ -1.29
POLR2J3-207ENST00000503564 H3BMG7 143 aa7□□□□□ -1.29
POLR2J3-207ENST00000503564 H0YGX0 51 aa6.99□□□□□ -1.29
POLR2J3-207ENST00000503564 LINC00313P59037 77 aa6.99□□□□□ -1.29
POLR2J3-207ENST00000503564 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
POLR2J3-207ENST00000503564 COX8AP10176 69 aa6.98□□□□□ -1.29
POLR2J3-207ENST00000503564 S100A2P29034 98 aa6.98□□□□□ -1.29
POLR2J3-207ENST00000503564 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
POLR2J3-207ENST00000503564 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
POLR2J3-207ENST00000503564 SNCGO76070 127 aa6.97□□□□□ -1.29
POLR2J3-207ENST00000503564 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
POLR2J3-207ENST00000503564 DLEU1O43261 78 aa6.96□□□□□ -1.3
POLR2J3-207ENST00000503564 RAB37Q96AX2 223 aa6.96□□□□□ -1.3
POLR2J3-207ENST00000503564 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
POLR2J3-207ENST00000503564 A0A1B0GX51 115 aa6.94□□□□□ -1.3
POLR2J3-207ENST00000503564 FABP2P12104 132 aa6.94□□□□□ -1.3
POLR2J3-207ENST00000503564 GHRHP01286 108 aa6.92□□□□□ -1.3
POLR2J3-207ENST00000503564 TRBV7-4A0A0J9YYF1 115 aa6.91□□□□□ -1.3
POLR2J3-207ENST00000503564 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
POLR2J3-207ENST00000503564 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
POLR2J3-207ENST00000503564 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
POLR2J3-207ENST00000503564 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
POLR2J3-207ENST00000503564 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
POLR2J3-207ENST00000503564 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
POLR2J3-207ENST00000503564 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
POLR2J3-207ENST00000503564 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
POLR2J3-207ENST00000503564 TRIAP1O43715 76 aa6.87□□□□□ -1.31
POLR2J3-207ENST00000503564 A0A1B0GV72 72 aa6.86□□□□□ -1.31
POLR2J3-207ENST00000503564 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
POLR2J3-207ENST00000503564 S100A6P06703 90 aa6.85□□□□□ -1.31
POLR2J3-207ENST00000503564 CEND1Q8N111 149 aa6.85□□□□□ -1.31
POLR2J3-207ENST00000503564 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
POLR2J3-207ENST00000503564 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 CCKP06307 115 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 FXYD2P54710 66 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 MTURNQ8N3F0 131 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 PAM16Q9Y3D7 125 aa6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
POLR2J3-207ENST00000503564 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-207ENST00000503564 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
POLR2J3-207ENST00000503564 TRACP01848 142 aa6.82□□□□□ -1.32
POLR2J3-207ENST00000503564 SPATA45Q537H7 98 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 364.5 ms