RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HIST1H2BNQ99877 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BMQ99879 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 TRBV7-7A0A0K0K1E9 115 aa3.18□□□□□ -1.9
LSM3P4-201ENST00000502948 A6NDN8 102 aa3.18□□□□□ -1.9
LSM3P4-201ENST00000502948 SNRPEP62304 92 aaKnown RBP3.18□□□□□ -1.9
LSM3P4-201ENST00000502948 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
LSM3P4-201ENST00000502948 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
LSM3P4-201ENST00000502948 F8WEM9 126 aa3.17□□□□□ -1.9
LSM3P4-201ENST00000502948 C3orf79P0CE67 100 aa3.17□□□□□ -1.9
LSM3P4-201ENST00000502948 VAMP3Q15836 100 aa3.17□□□□□ -1.9
LSM3P4-201ENST00000502948 SMIM11BQ8TCY0 68 aa3.17□□□□□ -1.9
LSM3P4-201ENST00000502948 TTTY13Q9BZ97 58 aa3.17□□□□□ -1.9
LSM3P4-201ENST00000502948 C20orf202A1L168 122 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 SCGB1D1O95968 90 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 Q6Q795 121 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 MUSTN1Q8IVN3 82 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 C20orf166-AS1Q96NR2 134 aa3.16□□□□□ -1.9
LSM3P4-201ENST00000502948 A0A0G2JQZ4 141 aa3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 hADV29S1A0JD25 119 aa3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 OCIAD2Q56VL3 154 aa3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 IGFL1Q6UW32 110 aa3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
LSM3P4-201ENST00000502948 A8MUU9 505 aa3.14□□□□□ -1.91
LSM3P4-201ENST00000502948 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
LSM3P4-201ENST00000502948 PCP2Q8IVA1 136 aa3.14□□□□□ -1.91
LSM3P4-201ENST00000502948 SS18L2Q9UHA2 77 aa3.14□□□□□ -1.91
LSM3P4-201ENST00000502948 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
LSM3P4-201ENST00000502948 LST1O00453 97 aa3.13□□□□□ -1.91
LSM3P4-201ENST00000502948 BVES-AS1Q5T3Y7 98 aa3.13□□□□□ -1.91
LSM3P4-201ENST00000502948 Q6ZQY7 126 aa3.13□□□□□ -1.91
LSM3P4-201ENST00000502948 OBSCN-AS1Q96MR7 158 aa3.13□□□□□ -1.91
LSM3P4-201ENST00000502948 KRTDAPP60985 99 aa3.12□□□□□ -1.91
LSM3P4-201ENST00000502948 TEN1Q86WV5 123 aa3.12□□□□□ -1.91
LSM3P4-201ENST00000502948 TRBV20-1A0A075B6N2 111 aa3.11□□□□□ -1.91
LSM3P4-201ENST00000502948 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
LSM3P4-201ENST00000502948 Q96NJ1 140 aa3.1□□□□□ -1.91
LSM3P4-201ENST00000502948 SNHG12Q9BXW3 62 aa3.1□□□□□ -1.91
LSM3P4-201ENST00000502948 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
LSM3P4-201ENST00000502948 SNCGO76070 127 aa3.09□□□□□ -1.91
LSM3P4-201ENST00000502948 A0A1B0GX51 115 aa3.08□□□□□ -1.92
LSM3P4-201ENST00000502948 H0YGX0 51 aa3.08□□□□□ -1.92
LSM3P4-201ENST00000502948 ATOH7Q8N100 152 aa3.08□□□□□ -1.92
LSM3P4-201ENST00000502948 MPLKIPQ8TAP9 179 aa3.08□□□□□ -1.92
LSM3P4-201ENST00000502948 C12orf57Q99622 126 aa3.08□□□□□ -1.92
LSM3P4-201ENST00000502948 USH2AO75445 5202 aa3.07□□□□□ -1.92
LSM3P4-201ENST00000502948 HSBP1L1C9JCN9 74 aa3.07□□□□□ -1.92
LSM3P4-201ENST00000502948 DLEU1O43261 78 aa3.06□□□□□ -1.92
LSM3P4-201ENST00000502948 MT2AP02795 61 aa3.06□□□□□ -1.92
LSM3P4-201ENST00000502948 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
LSM3P4-201ENST00000502948 KRTAP9-3Q9BYQ3 159 aa3.06□□□□□ -1.92
LSM3P4-201ENST00000502948 A0A087WSZ3 146 aa3.05□□□□□ -1.92
LSM3P4-201ENST00000502948 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
LSM3P4-201ENST00000502948 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
LSM3P4-201ENST00000502948 H3BUT2 72 aa3.05□□□□□ -1.92
LSM3P4-201ENST00000502948 TRBV7-4A0A0J9YYF1 115 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 H3BQ85 93 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 LINC00313P59037 77 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 HIST3H2BBQ8N257 126 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 HIST1H2BLQ99880 126 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 RBM12B-AS1Q9P1G2 102 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 HIGD1BQ9P298 99 aa3.04□□□□□ -1.92
LSM3P4-201ENST00000502948 H3BMG7 143 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 MT1FP04733 61 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 COX8AP10176 69 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 HRES1P13985 223 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 MTURNQ8N3F0 131 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 LINC00846Q9NV44 126 aa3.03□□□□□ -1.92
LSM3P4-201ENST00000502948 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 S100A2P29034 98 aa3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 FAM218AQ96MZ4 157 aa3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 LINC00472Q9H8W2 130 aa3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
LSM3P4-201ENST00000502948 FAM236DA0A1B0GTK5 79 aa3.01□□□□□ -1.93
LSM3P4-201ENST00000502948 FAM236CP0DP71 79 aa3.01□□□□□ -1.93
LSM3P4-201ENST00000502948 DSCR10P59022 87 aa3.01□□□□□ -1.93
LSM3P4-201ENST00000502948 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
LSM3P4-201ENST00000502948 RAB37Q96AX2 223 aa3.01□□□□□ -1.93
LSM3P4-201ENST00000502948 IGKV4-1P06312 121 aa3□□□□□ -1.93
LSM3P4-201ENST00000502948 SIGMAR1Q99720 223 aa3□□□□□ -1.93
LSM3P4-201ENST00000502948 C8orf87E5RJ46 101 aa2.99□□□□□ -1.93
LSM3P4-201ENST00000502948 TMEM256-PLSCR3K7ERE1 68 aa2.99□□□□□ -1.93
LSM3P4-201ENST00000502948 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
LSM3P4-201ENST00000502948 ANKRD29Q8N6D5 301 aa2.99□□□□□ -1.93
LSM3P4-201ENST00000502948 PRO1854Q9UHT4 67 aa2.99□□□□□ -1.93
LSM3P4-201ENST00000502948 S100A6P06703 90 aa2.98□□□□□ -1.93
LSM3P4-201ENST00000502948 FABP2P12104 132 aa2.98□□□□□ -1.93
LSM3P4-201ENST00000502948 A8MWP4 228 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 DNAL4O96015 105 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 UBE2V1Q13404 147 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 C2orf91Q6ZV80 131 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 CEND1Q8N111 149 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 ORMDL1Q9P0S3 153 aa2.97□□□□□ -1.93
LSM3P4-201ENST00000502948 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
LSM3P4-201ENST00000502948 J3KT08 172 aa2.96□□□□□ -1.94
LSM3P4-201ENST00000502948 TRACP01848 142 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms