RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 K7EQZ3 153 aa10.43□□□□□ -0.74
COL6A1-206ENST00000498614 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
COL6A1-206ENST00000498614 UBE2BP63146 152 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 DNAH10Q8IVF4 4471 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 DNAH7Q8WXX0 4024 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 A0A1W2PNN7 141 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
COL6A1-206ENST00000498614 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
COL6A1-206ENST00000498614 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
COL6A1-206ENST00000498614 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
COL6A1-206ENST00000498614 PLECQ15149 4684 aaKnown RBP10.36□□□□□ -0.75
COL6A1-206ENST00000498614 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
COL6A1-206ENST00000498614 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-206ENST00000498614 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
COL6A1-206ENST00000498614 C1orf64Q8NEQ6 169 aa10.34□□□□□ -0.75
COL6A1-206ENST00000498614 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
COL6A1-206ENST00000498614 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
COL6A1-206ENST00000498614 PSCAO43653 123 aa10.33□□□□□ -0.76
COL6A1-206ENST00000498614 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
COL6A1-206ENST00000498614 REG3GQ6UW15 175 aa10.33□□□□□ -0.76
COL6A1-206ENST00000498614 A0A096LNI7 61 aa10.32□□□□□ -0.76
COL6A1-206ENST00000498614 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
COL6A1-206ENST00000498614 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
COL6A1-206ENST00000498614 DYNC2H1Q8NCM8 4307 aaKnown RBP10.3□□□□□ -0.76
COL6A1-206ENST00000498614 PRR4Q16378 134 aa10.29□□□□□ -0.76
COL6A1-206ENST00000498614 C16orf90A8MZG2 172 aa10.28□□□□□ -0.76
COL6A1-206ENST00000498614 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
COL6A1-206ENST00000498614 PRLHP81277 87 aa10.26□□□□□ -0.77
COL6A1-206ENST00000498614 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
COL6A1-206ENST00000498614 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
COL6A1-206ENST00000498614 A0A087WSZ3 146 aa10.25□□□□□ -0.77
COL6A1-206ENST00000498614 Q1T7F1 81 aa10.25□□□□□ -0.77
COL6A1-206ENST00000498614 CYP4F30PQ9H0H9 118 aa10.24□□□□□ -0.77
COL6A1-206ENST00000498614 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
COL6A1-206ENST00000498614 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
COL6A1-206ENST00000498614 NUPR2A6NF83 97 aa10.21□□□□□ -0.78
COL6A1-206ENST00000498614 C1orf195Q5TG92 126 aa10.21□□□□□ -0.78
COL6A1-206ENST00000498614 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
COL6A1-206ENST00000498614 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
COL6A1-206ENST00000498614 KMT2AQ03164 3969 aa10.19□□□□□ -0.78
COL6A1-206ENST00000498614 PSPHP1O15172 72 aa10.19□□□□□ -0.78
COL6A1-206ENST00000498614 MP68P56378 58 aa10.18□□□□□ -0.78
COL6A1-206ENST00000498614 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
COL6A1-206ENST00000498614 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
COL6A1-206ENST00000498614 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
COL6A1-206ENST00000498614 NDUFB1O75438 58 aa10.17□□□□□ -0.78
COL6A1-206ENST00000498614 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
COL6A1-206ENST00000498614 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
COL6A1-206ENST00000498614 UBE2AP49459 152 aa10.16□□□□□ -0.78
COL6A1-206ENST00000498614 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
COL6A1-206ENST00000498614 CASC2Q6XLA1 102 aa10.12□□□□□ -0.79
COL6A1-206ENST00000498614 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
COL6A1-206ENST00000498614 H0Y9P7 68 aa10.12□□□□□ -0.79
COL6A1-206ENST00000498614 C9orf163Q8N9P6 203 aa10.12□□□□□ -0.79
COL6A1-206ENST00000498614 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
COL6A1-206ENST00000498614 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
COL6A1-206ENST00000498614 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
COL6A1-206ENST00000498614 A8MUN3 132 aa10.09□□□□□ -0.79
COL6A1-206ENST00000498614 PANO1I0J062 215 aa10.09□□□□□ -0.79
COL6A1-206ENST00000498614 LINC00472Q9H8W2 130 aa10.08□□□□□ -0.8
COL6A1-206ENST00000498614 A8MWP4 228 aa10.07□□□□□ -0.8
COL6A1-206ENST00000498614 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
COL6A1-206ENST00000498614 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
COL6A1-206ENST00000498614 SPRR1BP22528 89 aa10.06□□□□□ -0.8
COL6A1-206ENST00000498614 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
COL6A1-206ENST00000498614 V9GYY9 64 aa10.05□□□□□ -0.8
COL6A1-206ENST00000498614 HYDINQ4G0P3 5121 aa10.05□□□□□ -0.8
COL6A1-206ENST00000498614 H3BPC8 53 aa10.04□□□□□ -0.8
COL6A1-206ENST00000498614 LY6G6CO95867 125 aa10.04□□□□□ -0.8
COL6A1-206ENST00000498614 H0Y9J4 135 aa10.03□□□□□ -0.8
COL6A1-206ENST00000498614 Q5VV11 94 aa10.02□□□□□ -0.81
COL6A1-206ENST00000498614 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
COL6A1-206ENST00000498614 A8MU10 97 aa10□□□□□ -0.81
COL6A1-206ENST00000498614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
COL6A1-206ENST00000498614 MMP24-AS1A0A0U1RRL7 71 aa9.99□□□□□ -0.81
COL6A1-206ENST00000498614 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
COL6A1-206ENST00000498614 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.82
COL6A1-206ENST00000498614 SPACA4Q8TDM5 124 aa9.95□□□□□ -0.82
COL6A1-206ENST00000498614 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
COL6A1-206ENST00000498614 SACSQ9NZJ4 4579 aa9.94□□□□□ -0.82
COL6A1-206ENST00000498614 A0A087WTM6 91 aa9.93□□□□□ -0.82
COL6A1-206ENST00000498614 LIMD2Q9BT23 127 aa9.93□□□□□ -0.82
COL6A1-206ENST00000498614 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
COL6A1-206ENST00000498614 CHKB-CPT1BH3BT56 60 aa9.92□□□□□ -0.82
COL6A1-206ENST00000498614 COA5Q86WW8 74 aa9.92□□□□□ -0.82
COL6A1-206ENST00000498614 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
COL6A1-206ENST00000498614 IGLV7-46A0A075B6I9 117 aa9.9□□□□□ -0.82
COL6A1-206ENST00000498614 Q96NJ1 140 aa9.9□□□□□ -0.82
COL6A1-206ENST00000498614 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.82
COL6A1-206ENST00000498614 SEC61GP60059 68 aa9.9□□□□□ -0.82
COL6A1-206ENST00000498614 IGLV9-49A0A0B4J1Y8 123 aa9.89□□□□□ -0.83
COL6A1-206ENST00000498614 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
COL6A1-206ENST00000498614 HECTD4Q9Y4D8 3996 aa9.89□□□□□ -0.83
COL6A1-206ENST00000498614 RTL8CO15255 209 aa9.88□□□□□ -0.83
COL6A1-206ENST00000498614 Q6ZR54 194 aa9.88□□□□□ -0.83
COL6A1-206ENST00000498614 CD164Q04900 197 aa9.87□□□□□ -0.83
COL6A1-206ENST00000498614 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
COL6A1-206ENST00000498614 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms