RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
CCDC58-207ENST00000498466 NDUFA5Q16718 116 aa7.12□□□□□ -1.27
CCDC58-207ENST00000498466 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
CCDC58-207ENST00000498466 TRBV20-1A0A075B6N2 111 aa7.1□□□□□ -1.27
CCDC58-207ENST00000498466 F8WEM9 126 aa7.1□□□□□ -1.27
CCDC58-207ENST00000498466 TRGC2P03986 189 aa7.1□□□□□ -1.27
CCDC58-207ENST00000498466 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
CCDC58-207ENST00000498466 MT2AP02795 61 aa7.09□□□□□ -1.27
CCDC58-207ENST00000498466 A6NDN8 102 aa7.08□□□□□ -1.28
CCDC58-207ENST00000498466 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
CCDC58-207ENST00000498466 A4D1N5 150 aa7.07□□□□□ -1.28
CCDC58-207ENST00000498466 Q96NJ1 140 aa7.07□□□□□ -1.28
CCDC58-207ENST00000498466 TRBV7-7A0A0K0K1E9 115 aa7.06□□□□□ -1.28
CCDC58-207ENST00000498466 TTTY13Q9BZ97 58 aa7.06□□□□□ -1.28
CCDC58-207ENST00000498466 MT1FP04733 61 aa7.04□□□□□ -1.28
CCDC58-207ENST00000498466 Q6JHZ5 121 aa7.04□□□□□ -1.28
CCDC58-207ENST00000498466 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
CCDC58-207ENST00000498466 SYS1-DBNDD2H3BUS1 97 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 IGFL1Q6UW32 110 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 COPS9Q8WXC6 57 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
CCDC58-207ENST00000498466 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
CCDC58-207ENST00000498466 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
CCDC58-207ENST00000498466 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
CCDC58-207ENST00000498466 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
CCDC58-207ENST00000498466 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
CCDC58-207ENST00000498466 LST1O00453 97 aa7□□□□□ -1.29
CCDC58-207ENST00000498466 SMIM11BQ8TCY0 68 aa7□□□□□ -1.29
CCDC58-207ENST00000498466 IFITM1P13164 125 aa6.99□□□□□ -1.29
CCDC58-207ENST00000498466 LINC00846Q9NV44 126 aa6.99□□□□□ -1.29
CCDC58-207ENST00000498466 A8MUU9 505 aa6.98□□□□□ -1.29
CCDC58-207ENST00000498466 LINC01545Q5VT33 79 aa6.98□□□□□ -1.29
CCDC58-207ENST00000498466 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
CCDC58-207ENST00000498466 Q6ZQY7 126 aa6.97□□□□□ -1.29
CCDC58-207ENST00000498466 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
CCDC58-207ENST00000498466 VAMP3Q15836 100 aa6.96□□□□□ -1.3
CCDC58-207ENST00000498466 LINC00575Q6W349 94 aa6.95□□□□□ -1.3
CCDC58-207ENST00000498466 Q6ZVH6 145 aa6.95□□□□□ -1.3
CCDC58-207ENST00000498466 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
CCDC58-207ENST00000498466 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
CCDC58-207ENST00000498466 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
CCDC58-207ENST00000498466 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
CCDC58-207ENST00000498466 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
CCDC58-207ENST00000498466 H3BUT2 72 aa6.9□□□□□ -1.3
CCDC58-207ENST00000498466 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
CCDC58-207ENST00000498466 DSCR10P59022 87 aa6.89□□□□□ -1.31
CCDC58-207ENST00000498466 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
CCDC58-207ENST00000498466 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
CCDC58-207ENST00000498466 SCGB1D1O95968 90 aa6.87□□□□□ -1.31
CCDC58-207ENST00000498466 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
CCDC58-207ENST00000498466 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
CCDC58-207ENST00000498466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
CCDC58-207ENST00000498466 COLCA2A8K830 154 aa6.86□□□□□ -1.31
CCDC58-207ENST00000498466 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
CCDC58-207ENST00000498466 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
CCDC58-207ENST00000498466 HRES1P13985 223 aa6.85□□□□□ -1.31
CCDC58-207ENST00000498466 KRTDAPP60985 99 aa6.85□□□□□ -1.31
CCDC58-207ENST00000498466 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.31
CCDC58-207ENST00000498466 A0A087WSZ3 146 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BKO60814 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BJP06899 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BOP23527 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BBP33778 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BDP58876 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BCP62807 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST2H2BEQ16778 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.83□□□□□ -1.32
CCDC58-207ENST00000498466 TEN1Q86WV5 123 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BHQ93079 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BNQ99877 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 HIST1H2BMQ99879 126 aa6.83□□□□□ -1.32
CCDC58-207ENST00000498466 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
CCDC58-207ENST00000498466 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
CCDC58-207ENST00000498466 LINC00313P59037 77 aa6.8□□□□□ -1.32
CCDC58-207ENST00000498466 BVES-AS1Q5T3Y7 98 aa6.79□□□□□ -1.32
CCDC58-207ENST00000498466 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
CCDC58-207ENST00000498466 MTURNQ8N3F0 131 aa6.78□□□□□ -1.32
CCDC58-207ENST00000498466 C12orf57Q99622 126 aa6.77□□□□□ -1.33
CCDC58-207ENST00000498466 NDUFV3P56181 108 aaKnown RBP6.74□□□□□ -1.33
CCDC58-207ENST00000498466 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
CCDC58-207ENST00000498466 A8MWP4 228 aa6.71□□□□□ -1.34
CCDC58-207ENST00000498466 H3BMG7 143 aa6.71□□□□□ -1.34
CCDC58-207ENST00000498466 SNCGO76070 127 aa6.71□□□□□ -1.34
CCDC58-207ENST00000498466 SNRPEP62304 92 aaKnown RBP6.7□□□□□ -1.34
CCDC58-207ENST00000498466 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
CCDC58-207ENST00000498466 NEBP20929 6669 aa6.7□□□□□ -1.34
CCDC58-207ENST00000498466 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
CCDC58-207ENST00000498466 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
CCDC58-207ENST00000498466 IGHV6-1A0A0B4J1U7 121 aa6.67□□□□□ -1.34
CCDC58-207ENST00000498466 FABP2P12104 132 aa6.66□□□□□ -1.34
CCDC58-207ENST00000498466 DEFB116Q30KQ4 102 aa6.66□□□□□ -1.34
CCDC58-207ENST00000498466 FAM218AQ96MZ4 157 aa6.65□□□□□ -1.34
CCDC58-207ENST00000498466 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
CCDC58-207ENST00000498466 SPINK7P58062 85 aa6.64□□□□□ -1.35
CCDC58-207ENST00000498466 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
CCDC58-207ENST00000498466 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
CCDC58-207ENST00000498466 H0YGX0 51 aa6.63□□□□□ -1.35
CCDC58-207ENST00000498466 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms