RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
NUP50-219ENST00000497960 SPRR1BP22528 89 aa8.83□□□□□ -1
NUP50-219ENST00000497960 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
NUP50-219ENST00000497960 Q8NBF4 154 aa8.83□□□□□ -1
NUP50-219ENST00000497960 IGLV5-48A0A075B6I7 105 aa8.82□□□□□ -1
NUP50-219ENST00000497960 MOBPQ13875 183 aa8.82□□□□□ -1
NUP50-219ENST00000497960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
NUP50-219ENST00000497960 A0A1B0GX51 115 aa8.81□□□□□ -1
NUP50-219ENST00000497960 PCP4L1A6NKN8 68 aa8.81□□□□□ -1
NUP50-219ENST00000497960 SCGB1C2P0DMR2 95 aa8.81□□□□□ -1
NUP50-219ENST00000497960 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
NUP50-219ENST00000497960 NAA38Q9BRA0 125 aaKnown RBP8.81□□□□□ -1
NUP50-219ENST00000497960 LAMTOR3Q9UHA4 124 aa8.81□□□□□ -1
NUP50-219ENST00000497960 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
NUP50-219ENST00000497960 DNAL4O96015 105 aa8.79□□□□□ -1
NUP50-219ENST00000497960 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
NUP50-219ENST00000497960 Q8N377 158 aa8.78□□□□□ -1
NUP50-219ENST00000497960 F8WEM9 126 aa8.77□□□□□ -1.01
NUP50-219ENST00000497960 SPINK1P00995 79 aa8.77□□□□□ -1.01
NUP50-219ENST00000497960 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
NUP50-219ENST00000497960 SNHG12Q9BXW3 62 aa8.77□□□□□ -1.01
NUP50-219ENST00000497960 OCIAD2Q56VL3 154 aa8.76□□□□□ -1.01
NUP50-219ENST00000497960 PPDPFLQ8WWR9 84 aa8.76□□□□□ -1.01
NUP50-219ENST00000497960 H3BUT2 72 aa8.75□□□□□ -1.01
NUP50-219ENST00000497960 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
NUP50-219ENST00000497960 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
NUP50-219ENST00000497960 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
NUP50-219ENST00000497960 LST1O00453 97 aa8.74□□□□□ -1.01
NUP50-219ENST00000497960 GHRHP01286 108 aa8.74□□□□□ -1.01
NUP50-219ENST00000497960 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
NUP50-219ENST00000497960 TAX1BP3O14907 124 aa8.73□□□□□ -1.01
NUP50-219ENST00000497960 TRACP01848 142 aa8.72□□□□□ -1.01
NUP50-219ENST00000497960 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
NUP50-219ENST00000497960 C9orf118A6NHY6 69 aa8.71□□□□□ -1.02
NUP50-219ENST00000497960 ATXN8Q156A1 80 aa8.71□□□□□ -1.02
NUP50-219ENST00000497960 COL5A1-AS1Q5SY13 56 aa8.71□□□□□ -1.02
NUP50-219ENST00000497960 TCL1BO95988 128 aa8.7□□□□□ -1.02
NUP50-219ENST00000497960 FABP2P12104 132 aa8.7□□□□□ -1.02
NUP50-219ENST00000497960 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
NUP50-219ENST00000497960 A0A1W2PPM0 123 aa8.68□□□□□ -1.02
NUP50-219ENST00000497960 H3BQ85 93 aa8.68□□□□□ -1.02
NUP50-219ENST00000497960 TRBV20-1A0A075B6N2 111 aa8.66□□□□□ -1.02
NUP50-219ENST00000497960 NDUFV3P56181 108 aaKnown RBP8.66□□□□□ -1.02
NUP50-219ENST00000497960 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
NUP50-219ENST00000497960 TMEM256-PLSCR3K7ERE1 68 aa8.65□□□□□ -1.02
NUP50-219ENST00000497960 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.02
NUP50-219ENST00000497960 Q6JHZ5 121 aa8.64□□□□□ -1.03
NUP50-219ENST00000497960 IGLV8-61A0A075B6I0 122 aa8.63□□□□□ -1.03
NUP50-219ENST00000497960 A0A0G2JQZ4 141 aa8.62□□□□□ -1.03
NUP50-219ENST00000497960 A0A1B0GV72 72 aa8.62□□□□□ -1.03
NUP50-219ENST00000497960 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
NUP50-219ENST00000497960 H3BMG7 143 aa8.61□□□□□ -1.03
NUP50-219ENST00000497960 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
NUP50-219ENST00000497960 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
NUP50-219ENST00000497960 C9JAW5 83 aa8.6□□□□□ -1.03
NUP50-219ENST00000497960 BAALC-AS2P0C853 105 aa8.6□□□□□ -1.03
NUP50-219ENST00000497960 CD164Q04900 197 aa8.6□□□□□ -1.03
NUP50-219ENST00000497960 UBE2V1Q13404 147 aa8.6□□□□□ -1.03
NUP50-219ENST00000497960 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
NUP50-219ENST00000497960 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
NUP50-219ENST00000497960 MUC2Q02817 5179 aa8.57□□□□□ -1.04
NUP50-219ENST00000497960 MTURNQ8N3F0 131 aa8.54□□□□□ -1.04
NUP50-219ENST00000497960 H3BT86 120 aa8.53□□□□□ -1.04
NUP50-219ENST00000497960 K7EP34 96 aa8.53□□□□□ -1.04
NUP50-219ENST00000497960 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
NUP50-219ENST00000497960 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
NUP50-219ENST00000497960 RBM3P98179 157 aaKnown RBP8.51□□□□□ -1.05
NUP50-219ENST00000497960 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
NUP50-219ENST00000497960 TEN1Q86WV5 123 aa8.51□□□□□ -1.05
NUP50-219ENST00000497960 DSCR8Q96T75 97 aa8.5□□□□□ -1.05
NUP50-219ENST00000497960 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
NUP50-219ENST00000497960 Q6Q795 121 aa8.49□□□□□ -1.05
NUP50-219ENST00000497960 GTF2H5Q6ZYL4 71 aa8.49□□□□□ -1.05
NUP50-219ENST00000497960 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
NUP50-219ENST00000497960 TRBV7-4A0A0J9YYF1 115 aa8.48□□□□□ -1.05
NUP50-219ENST00000497960 Q5XG85 94 aa8.48□□□□□ -1.05
NUP50-219ENST00000497960 VPS25Q9BRG1 176 aa8.48□□□□□ -1.05
NUP50-219ENST00000497960 CCKP06307 115 aa8.47□□□□□ -1.05
NUP50-219ENST00000497960 SS18L2Q9UHA2 77 aa8.47□□□□□ -1.05
NUP50-219ENST00000497960 A0A1W2PNM2 257 aa8.46□□□□□ -1.06
NUP50-219ENST00000497960 XP32Q5T750 250 aa8.46□□□□□ -1.06
NUP50-219ENST00000497960 A0A087WSZ3 146 aa8.45□□□□□ -1.06
NUP50-219ENST00000497960 C14orf132Q9NPU4 83 aa8.44□□□□□ -1.06
NUP50-219ENST00000497960 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 C1orf195Q5TG92 126 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 Q6ZQT0 140 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 OBSCN-AS1Q96MR7 158 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
NUP50-219ENST00000497960 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
NUP50-219ENST00000497960 PDE6GP18545 87 aa8.4□□□□□ -1.06
NUP50-219ENST00000497960 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
NUP50-219ENST00000497960 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
NUP50-219ENST00000497960 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
NUP50-219ENST00000497960 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
NUP50-219ENST00000497960 F8W1H4 67 aa8.35□□□□□ -1.07
NUP50-219ENST00000497960 A0A1B0GV90 55 aa8.33□□□□□ -1.08
NUP50-219ENST00000497960 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
NUP50-219ENST00000497960 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
NUP50-219ENST00000497960 A0A1B0GW54 56 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms