RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 INAFM1C9JVW0 142 aa8.41□□□□□ -1.06
GAPVD1-220ENST00000497580 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
GAPVD1-220ENST00000497580 LCA10Q71F78 164 aa8.41□□□□□ -1.06
GAPVD1-220ENST00000497580 APOC4P55056 127 aa8.4□□□□□ -1.06
GAPVD1-220ENST00000497580 PCOTHQ58A44 107 aa8.4□□□□□ -1.06
GAPVD1-220ENST00000497580 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
GAPVD1-220ENST00000497580 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
GAPVD1-220ENST00000497580 TNP2Q05952 138 aa8.37□□□□□ -1.07
GAPVD1-220ENST00000497580 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
GAPVD1-220ENST00000497580 Q8NAQ8 132 aa8.37□□□□□ -1.07
GAPVD1-220ENST00000497580 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
GAPVD1-220ENST00000497580 A0A096LNI7 61 aa8.37□□□□□ -1.07
GAPVD1-220ENST00000497580 COA5Q86WW8 74 aa8.36□□□□□ -1.07
GAPVD1-220ENST00000497580 KRTAP1-1Q07627 177 aa8.35□□□□□ -1.07
GAPVD1-220ENST00000497580 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
GAPVD1-220ENST00000497580 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
GAPVD1-220ENST00000497580 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
GAPVD1-220ENST00000497580 A0A1B0GW54 56 aa8.34□□□□□ -1.07
GAPVD1-220ENST00000497580 PRLHP81277 87 aa8.34□□□□□ -1.07
GAPVD1-220ENST00000497580 H0Y9J4 135 aa8.33□□□□□ -1.08
GAPVD1-220ENST00000497580 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
GAPVD1-220ENST00000497580 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
GAPVD1-220ENST00000497580 NDUFS5O43920 106 aa8.31□□□□□ -1.08
GAPVD1-220ENST00000497580 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-220ENST00000497580 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
GAPVD1-220ENST00000497580 Q75L30 129 aa8.29□□□□□ -1.08
GAPVD1-220ENST00000497580 LOC101927531A0A1B0GV80 90 aa8.28□□□□□ -1.08
GAPVD1-220ENST00000497580 IGKV2-24A0A0C4DH68 120 aa8.28□□□□□ -1.08
GAPVD1-220ENST00000497580 A6NN06 94 aa8.28□□□□□ -1.08
GAPVD1-220ENST00000497580 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
GAPVD1-220ENST00000497580 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-220ENST00000497580 TENM2Q9NT68 2774 aa8.27□□□□□ -1.09
GAPVD1-220ENST00000497580 CASC10Q5T4H9 136 aa8.27□□□□□ -1.09
GAPVD1-220ENST00000497580 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
GAPVD1-220ENST00000497580 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
GAPVD1-220ENST00000497580 MOBPQ13875 183 aa8.26□□□□□ -1.09
GAPVD1-220ENST00000497580 CDC42SE1Q9NRR8 79 aa8.26□□□□□ -1.09
GAPVD1-220ENST00000497580 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
GAPVD1-220ENST00000497580 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-220ENST00000497580 ANK3Q12955 4377 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-220ENST00000497580 SPINK7P58062 85 aa8.24□□□□□ -1.09
GAPVD1-220ENST00000497580 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-220ENST00000497580 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
GAPVD1-220ENST00000497580 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
GAPVD1-220ENST00000497580 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
GAPVD1-220ENST00000497580 SPRR1AP35321 89 aa8.23□□□□□ -1.09
GAPVD1-220ENST00000497580 J3QKU1 62 aa8.21□□□□□ -1.09
GAPVD1-220ENST00000497580 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-220ENST00000497580 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
GAPVD1-220ENST00000497580 H3BPC8 53 aa8.2□□□□□ -1.1
GAPVD1-220ENST00000497580 A8MWP4 228 aa8.18□□□□□ -1.1
GAPVD1-220ENST00000497580 COL7A1Q02388 2944 aa8.17□□□□□ -1.1
GAPVD1-220ENST00000497580 IGLV7-46A0A075B6I9 117 aa8.17□□□□□ -1.1
GAPVD1-220ENST00000497580 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
GAPVD1-220ENST00000497580 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
GAPVD1-220ENST00000497580 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
GAPVD1-220ENST00000497580 PLA2G2DQ9UNK4 145 aa8.14□□□□□ -1.11
GAPVD1-220ENST00000497580 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
GAPVD1-220ENST00000497580 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
GAPVD1-220ENST00000497580 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
GAPVD1-220ENST00000497580 LINC00313P59037 77 aa8.13□□□□□ -1.11
GAPVD1-220ENST00000497580 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
GAPVD1-220ENST00000497580 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
GAPVD1-220ENST00000497580 IGLV5-37A0A075B6J1 123 aa8.11□□□□□ -1.11
GAPVD1-220ENST00000497580 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
GAPVD1-220ENST00000497580 HRES1P13985 223 aa8.1□□□□□ -1.11
GAPVD1-220ENST00000497580 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
GAPVD1-220ENST00000497580 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
GAPVD1-220ENST00000497580 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
GAPVD1-220ENST00000497580 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
GAPVD1-220ENST00000497580 MDFIQ99750 246 aa8.06□□□□□ -1.12
GAPVD1-220ENST00000497580 H3BNG1 76 aa8.05□□□□□ -1.12
GAPVD1-220ENST00000497580 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
GAPVD1-220ENST00000497580 DNAH10OSP0CZ25 163 aa8.03□□□□□ -1.12
GAPVD1-220ENST00000497580 H3BS24 57 aa8.03□□□□□ -1.12
GAPVD1-220ENST00000497580 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
GAPVD1-220ENST00000497580 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
GAPVD1-220ENST00000497580 K7EIL1 84 aa8.02□□□□□ -1.13
GAPVD1-220ENST00000497580 UBE2DNLQ8IWF7 75 aa8.01□□□□□ -1.13
GAPVD1-220ENST00000497580 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
GAPVD1-220ENST00000497580 ANK2Q01484 3957 aa8□□□□□ -1.13
GAPVD1-220ENST00000497580 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
GAPVD1-220ENST00000497580 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
GAPVD1-220ENST00000497580 SPINK6Q6UWN8 80 aa7.98□□□□□ -1.13
GAPVD1-220ENST00000497580 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
GAPVD1-220ENST00000497580 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
GAPVD1-220ENST00000497580 A0A087X002 238 aa7.94□□□□□ -1.14
GAPVD1-220ENST00000497580 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
GAPVD1-220ENST00000497580 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
GAPVD1-220ENST00000497580 A0A1B0GU69 56 aa7.92□□□□□ -1.14
GAPVD1-220ENST00000497580 Q6ZR54 194 aa7.91□□□□□ -1.14
GAPVD1-220ENST00000497580 KRTAP24-1Q3LI83 254 aa7.91□□□□□ -1.14
GAPVD1-220ENST00000497580 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
GAPVD1-220ENST00000497580 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
GAPVD1-220ENST00000497580 Q96NJ1 140 aa7.89□□□□□ -1.15
GAPVD1-220ENST00000497580 ACYP2P14621 99 aa7.87□□□□□ -1.15
GAPVD1-220ENST00000497580 SPRR1BP22528 89 aa7.87□□□□□ -1.15
GAPVD1-220ENST00000497580 Q5W150 140 aa7.87□□□□□ -1.15
GAPVD1-220ENST00000497580 KRTAP1-5Q9BYS1 174 aa7.86□□□□□ -1.15
GAPVD1-220ENST00000497580 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms