RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.2□□□□□ -0.3
HLA-C-209ENST00000495835 IGLV8-61A0A075B6I0 122 aa13.19□□□□□ -0.3
HLA-C-209ENST00000495835 A0A0G2JQZ4 141 aa13.19□□□□□ -0.3
HLA-C-209ENST00000495835 C9orf92A6NGG3 77 aa13.19□□□□□ -0.3
HLA-C-209ENST00000495835 HIGD1BQ9P298 99 aa13.16□□□□□ -0.3
HLA-C-209ENST00000495835 C12orf57Q99622 126 aa13.15□□□□□ -0.3
HLA-C-209ENST00000495835 OCIAD2Q56VL3 154 aa13.14□□□□□ -0.31
HLA-C-209ENST00000495835 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
HLA-C-209ENST00000495835 KRTAP9-2Q9BYQ4 174 aa13.12□□□□□ -0.31
HLA-C-209ENST00000495835 SNCGO76070 127 aa13.11□□□□□ -0.31
HLA-C-209ENST00000495835 CFC1BP0CG36 223 aa13.11□□□□□ -0.31
HLA-C-209ENST00000495835 CFC1P0CG37 223 aa13.11□□□□□ -0.31
HLA-C-209ENST00000495835 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
HLA-C-209ENST00000495835 C14orf144Q96I85 54 aa13.11□□□□□ -0.31
HLA-C-209ENST00000495835 SPATA45Q537H7 98 aa13.1□□□□□ -0.31
HLA-C-209ENST00000495835 IGFL1Q6UW32 110 aa13.09□□□□□ -0.31
HLA-C-209ENST00000495835 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
HLA-C-209ENST00000495835 SNHG12Q9BXW3 62 aa13.09□□□□□ -0.31
HLA-C-209ENST00000495835 A0A0B4J2C4 111 aa13.08□□□□□ -0.32
HLA-C-209ENST00000495835 H0YGX0 51 aa13.08□□□□□ -0.32
HLA-C-209ENST00000495835 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
HLA-C-209ENST00000495835 PAM16Q9Y3D7 125 aa13.08□□□□□ -0.32
HLA-C-209ENST00000495835 TRBV7-7A0A0K0K1E9 115 aa13.07□□□□□ -0.32
HLA-C-209ENST00000495835 C2orf91Q6ZV80 131 aa13.03□□□□□ -0.32
HLA-C-209ENST00000495835 RPL37P61927 97 aaKnown RBP13.02□□□□□ -0.33
HLA-C-209ENST00000495835 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
HLA-C-209ENST00000495835 A6NJY4 79 aa13□□□□□ -0.33
HLA-C-209ENST00000495835 GHRHP01286 108 aa13□□□□□ -0.33
HLA-C-209ENST00000495835 CEND1Q8N111 149 aa13□□□□□ -0.33
HLA-C-209ENST00000495835 A0A1B0GX51 115 aa12.98□□□□□ -0.33
HLA-C-209ENST00000495835 LCE2CQ5TA81 110 aa12.98□□□□□ -0.33
HLA-C-209ENST00000495835 PRO1854Q9UHT4 67 aa12.97□□□□□ -0.33
HLA-C-209ENST00000495835 Q6Q795 121 aa12.96□□□□□ -0.33
HLA-C-209ENST00000495835 KRTAP19-2Q3LHN2 52 aa12.95□□□□□ -0.34
HLA-C-209ENST00000495835 H3BUT2 72 aa12.93□□□□□ -0.34
HLA-C-209ENST00000495835 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
HLA-C-209ENST00000495835 LST1O00453 97 aa12.92□□□□□ -0.34
HLA-C-209ENST00000495835 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
HLA-C-209ENST00000495835 SS18L2Q9UHA2 77 aa12.92□□□□□ -0.34
HLA-C-209ENST00000495835 TEN1Q86WV5 123 aa12.91□□□□□ -0.34
HLA-C-209ENST00000495835 FXYD2P54710 66 aa12.87□□□□□ -0.35
HLA-C-209ENST00000495835 H3BMG7 143 aa12.84□□□□□ -0.35
HLA-C-209ENST00000495835 PYY3Q5JQD4 70 aa12.83□□□□□ -0.36
HLA-C-209ENST00000495835 H3BQ85 93 aa12.82□□□□□ -0.36
HLA-C-209ENST00000495835 TRIAP1O43715 76 aa12.82□□□□□ -0.36
HLA-C-209ENST00000495835 MT1HP80294 61 aa12.82□□□□□ -0.36
HLA-C-209ENST00000495835 HSD52Q0P140 79 aa12.82□□□□□ -0.36
HLA-C-209ENST00000495835 Q75L30 129 aa12.82□□□□□ -0.36
HLA-C-209ENST00000495835 OBSCN-AS1Q96MR7 158 aa12.81□□□□□ -0.36
HLA-C-209ENST00000495835 FABP2P12104 132 aa12.8□□□□□ -0.36
HLA-C-209ENST00000495835 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
HLA-C-209ENST00000495835 ATP11AUNQ6ZP68 121 aa12.78□□□□□ -0.36
HLA-C-209ENST00000495835 A0A087WSZ3 146 aa12.76□□□□□ -0.37
HLA-C-209ENST00000495835 DNAL4O96015 105 aa12.76□□□□□ -0.37
HLA-C-209ENST00000495835 COX6CP09669 75 aa12.76□□□□□ -0.37
HLA-C-209ENST00000495835 ORMDL1Q9P0S3 153 aa12.74□□□□□ -0.37
HLA-C-209ENST00000495835 PSMB2P49721 201 aa12.73□□□□□ -0.37
HLA-C-209ENST00000495835 Q96NJ1 140 aa12.72□□□□□ -0.37
HLA-C-209ENST00000495835 TMEM256-PLSCR3K7ERE1 68 aa12.71□□□□□ -0.37
HLA-C-209ENST00000495835 COX6B2Q6YFQ2 88 aa12.7□□□□□ -0.38
HLA-C-209ENST00000495835 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
HLA-C-209ENST00000495835 KRTAP9-6A0A140TA67 174 aa12.69□□□□□ -0.38
HLA-C-209ENST00000495835 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
HLA-C-209ENST00000495835 ANKRD29Q8N6D5 301 aa12.69□□□□□ -0.38
HLA-C-209ENST00000495835 TRBV7-4A0A0J9YYF1 115 aa12.68□□□□□ -0.38
HLA-C-209ENST00000495835 C20orf166-AS1Q96NR2 134 aa12.68□□□□□ -0.38
HLA-C-209ENST00000495835 K7ERJ3 54 aa12.66□□□□□ -0.38
HLA-C-209ENST00000495835 A8MUU9 505 aa12.65□□□□□ -0.38
HLA-C-209ENST00000495835 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
HLA-C-209ENST00000495835 FLGP20930 4061 aaPredicted RBP12.6□□□□□ -0.39
HLA-C-209ENST00000495835 TRACP01848 142 aa12.6□□□□□ -0.39
HLA-C-209ENST00000495835 LORP23490 312 aaPredicted RBP12.6□□□□□ -0.39
HLA-C-209ENST00000495835 M0R2T5 61 aa12.59□□□□□ -0.39
HLA-C-209ENST00000495835 KRTAP10-6P60371 365 aaPredicted RBP12.59□□□□□ -0.39
HLA-C-209ENST00000495835 TMA7Q9Y2S6 64 aaKnown RBP12.58□□□□□ -0.4
HLA-C-209ENST00000495835 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
HLA-C-209ENST00000495835 CCKP06307 115 aa12.55□□□□□ -0.4
HLA-C-209ENST00000495835 IGKV4-1P06312 121 aa12.54□□□□□ -0.4
HLA-C-209ENST00000495835 LINC00313P59037 77 aa12.54□□□□□ -0.4
HLA-C-209ENST00000495835 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
HLA-C-209ENST00000495835 DSCR10P59022 87 aa12.53□□□□□ -0.4
HLA-C-209ENST00000495835 LINC00472Q9H8W2 130 aa12.52□□□□□ -0.41
HLA-C-209ENST00000495835 A0A1B0GV72 72 aa12.51□□□□□ -0.41
HLA-C-209ENST00000495835 RBM3P98179 157 aaKnown RBP12.49□□□□□ -0.41
HLA-C-209ENST00000495835 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
HLA-C-209ENST00000495835 DSCR8Q96T75 97 aa12.46□□□□□ -0.41
HLA-C-209ENST00000495835 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
HLA-C-209ENST00000495835 KRTAP16-1A8MUX0 517 aa12.44□□□□□ -0.42
HLA-C-209ENST00000495835 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
HLA-C-209ENST00000495835 CRCT1Q9UGL9 99 aa12.41□□□□□ -0.42
HLA-C-209ENST00000495835 FSIP2Q5CZC0 6907 aa12.41□□□□□ -0.42
HLA-C-209ENST00000495835 DEFB116Q30KQ4 102 aa12.4□□□□□ -0.42
HLA-C-209ENST00000495835 M0R143 59 aa12.39□□□□□ -0.43
HLA-C-209ENST00000495835 VPS25Q9BRG1 176 aa12.39□□□□□ -0.43
HLA-C-209ENST00000495835 C9JAW5 83 aa12.37□□□□□ -0.43
HLA-C-209ENST00000495835 NOTCH2NLQ7Z3S9 236 aa12.37□□□□□ -0.43
HLA-C-209ENST00000495835 IGHV6-1A0A0B4J1U7 121 aa12.36□□□□□ -0.43
HLA-C-209ENST00000495835 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
HLA-C-209ENST00000495835 J3KT08 172 aa12.35□□□□□ -0.43
HLA-C-209ENST00000495835 ATXN8Q156A1 80 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms