RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 IFITM1P13164 125 aa4.7□□□□□ -1.66
LRCH3-219ENST00000494069 LINC01547P58512 204 aaPredicted RBP4.7□□□□□ -1.66
LRCH3-219ENST00000494069 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
LRCH3-219ENST00000494069 SLC25A34Q6PIV7 304 aa4.69□□□□□ -1.66
LRCH3-219ENST00000494069 HIST3H2BBQ8N257 126 aa4.69□□□□□ -1.66
LRCH3-219ENST00000494069 TRBV7-6A0A0J9YX20 115 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 TEX49A0A1B0GTD5 131 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 H7C2G1 150 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 Q6ZVH6 145 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 SMIM11BQ8TCY0 68 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
LRCH3-219ENST00000494069 IGLV5-48A0A075B6I7 105 aa4.67□□□□□ -1.66
LRCH3-219ENST00000494069 A0A1B0GWB2 263 aa4.67□□□□□ -1.66
LRCH3-219ENST00000494069 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
LRCH3-219ENST00000494069 COPS9Q8WXC6 57 aa4.67□□□□□ -1.66
LRCH3-219ENST00000494069 PRO1933Q9H354 126 aa4.67□□□□□ -1.66
LRCH3-219ENST00000494069 TRAV13-2A0A0B4J235 113 aa4.66□□□□□ -1.66
LRCH3-219ENST00000494069 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
LRCH3-219ENST00000494069 LIMD2Q9BT23 127 aa4.66□□□□□ -1.66
LRCH3-219ENST00000494069 S100A2P29034 98 aa4.65□□□□□ -1.67
LRCH3-219ENST00000494069 SNRPEP62304 92 aaKnown RBP4.65□□□□□ -1.67
LRCH3-219ENST00000494069 A4D1N5 150 aa4.64□□□□□ -1.67
LRCH3-219ENST00000494069 AKR1D1P51857 326 aa4.64□□□□□ -1.67
LRCH3-219ENST00000494069 CD164Q04900 197 aa4.64□□□□□ -1.67
LRCH3-219ENST00000494069 PCOTHQ58A44 107 aa4.64□□□□□ -1.67
LRCH3-219ENST00000494069 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
LRCH3-219ENST00000494069 HSBP1L1C9JCN9 74 aa4.62□□□□□ -1.67
LRCH3-219ENST00000494069 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
LRCH3-219ENST00000494069 LINC00575Q6W349 94 aa4.62□□□□□ -1.67
LRCH3-219ENST00000494069 C12orf57Q99622 126 aa4.62□□□□□ -1.67
LRCH3-219ENST00000494069 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
LRCH3-219ENST00000494069 S100A6P06703 90 aa4.61□□□□□ -1.67
LRCH3-219ENST00000494069 Q5XG85 94 aa4.61□□□□□ -1.67
LRCH3-219ENST00000494069 IGLV8-61A0A075B6I0 122 aa4.6□□□□□ -1.67
LRCH3-219ENST00000494069 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
LRCH3-219ENST00000494069 Q6ZQY7 126 aa4.6□□□□□ -1.67
LRCH3-219ENST00000494069 NHP2Q9NX24 153 aaKnown RBP4.6□□□□□ -1.67
LRCH3-219ENST00000494069 hADV29S1A0JD25 119 aa4.59□□□□□ -1.67
LRCH3-219ENST00000494069 VAMP3Q15836 100 aa4.59□□□□□ -1.67
LRCH3-219ENST00000494069 COX8AP10176 69 aa4.58□□□□□ -1.68
LRCH3-219ENST00000494069 PCP4P48539 62 aa4.58□□□□□ -1.68
LRCH3-219ENST00000494069 HIST1H4GQ99525 98 aa4.58□□□□□ -1.68
LRCH3-219ENST00000494069 F8WEM9 126 aa4.57□□□□□ -1.68
LRCH3-219ENST00000494069 IGFL1Q6UW32 110 aa4.57□□□□□ -1.68
LRCH3-219ENST00000494069 C14orf144Q96I85 54 aa4.57□□□□□ -1.68
LRCH3-219ENST00000494069 CFC1BP0CG36 223 aa4.56□□□□□ -1.68
LRCH3-219ENST00000494069 CFC1P0CG37 223 aa4.56□□□□□ -1.68
LRCH3-219ENST00000494069 OCIAD2Q56VL3 154 aa4.56□□□□□ -1.68
LRCH3-219ENST00000494069 TRBV7-7A0A0K0K1E9 115 aa4.55□□□□□ -1.68
LRCH3-219ENST00000494069 H3BUT2 72 aa4.55□□□□□ -1.68
LRCH3-219ENST00000494069 DLEU1O43261 78 aa4.55□□□□□ -1.68
LRCH3-219ENST00000494069 TCL1BO95988 128 aa4.55□□□□□ -1.68
LRCH3-219ENST00000494069 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
LRCH3-219ENST00000494069 MT1HP80294 61 aa4.55□□□□□ -1.68
LRCH3-219ENST00000494069 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
LRCH3-219ENST00000494069 Q6JHZ5 121 aa4.54□□□□□ -1.68
LRCH3-219ENST00000494069 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
LRCH3-219ENST00000494069 PAM16Q9Y3D7 125 aa4.54□□□□□ -1.68
LRCH3-219ENST00000494069 SPATA45Q537H7 98 aa4.53□□□□□ -1.68
LRCH3-219ENST00000494069 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
LRCH3-219ENST00000494069 C2orf91Q6ZV80 131 aa4.53□□□□□ -1.68
LRCH3-219ENST00000494069 FAM218AQ96MZ4 157 aa4.53□□□□□ -1.68
LRCH3-219ENST00000494069 SNHG12Q9BXW3 62 aa4.53□□□□□ -1.68
LRCH3-219ENST00000494069 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-219ENST00000494069 RAB37Q96AX2 223 aa4.51□□□□□ -1.69
LRCH3-219ENST00000494069 A0A0B4J2C4 111 aa4.5□□□□□ -1.69
LRCH3-219ENST00000494069 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
LRCH3-219ENST00000494069 OBSCN-AS1Q96MR7 158 aa4.5□□□□□ -1.69
LRCH3-219ENST00000494069 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
LRCH3-219ENST00000494069 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
LRCH3-219ENST00000494069 H0YGX0 51 aa4.48□□□□□ -1.69
LRCH3-219ENST00000494069 FXYD2P54710 66 aa4.48□□□□□ -1.69
LRCH3-219ENST00000494069 NDUFV3P56181 108 aaKnown RBP4.48□□□□□ -1.69
LRCH3-219ENST00000494069 CEND1Q8N111 149 aa4.48□□□□□ -1.69
LRCH3-219ENST00000494069 LST1O00453 97 aa4.47□□□□□ -1.69
LRCH3-219ENST00000494069 FABP2P12104 132 aa4.46□□□□□ -1.7
LRCH3-219ENST00000494069 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-219ENST00000494069 PRO1854Q9UHT4 67 aa4.46□□□□□ -1.7
LRCH3-219ENST00000494069 A0A087WSZ3 146 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 H3BMG7 143 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 Q6Q795 121 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 Q75L30 129 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 Q96NJ1 140 aa4.45□□□□□ -1.7
LRCH3-219ENST00000494069 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
LRCH3-219ENST00000494069 K7ERJ3 54 aa4.44□□□□□ -1.7
LRCH3-219ENST00000494069 M0R2T5 61 aa4.44□□□□□ -1.7
LRCH3-219ENST00000494069 PYY3Q5JQD4 70 aa4.44□□□□□ -1.7
LRCH3-219ENST00000494069 TEN1Q86WV5 123 aa4.44□□□□□ -1.7
LRCH3-219ENST00000494069 A0A1B0GV72 72 aa4.43□□□□□ -1.7
LRCH3-219ENST00000494069 A0A1B0GX51 115 aa4.43□□□□□ -1.7
LRCH3-219ENST00000494069 SNCGO76070 127 aa4.43□□□□□ -1.7
LRCH3-219ENST00000494069 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
LRCH3-219ENST00000494069 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
LRCH3-219ENST00000494069 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
LRCH3-219ENST00000494069 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
LRCH3-219ENST00000494069 DSCR10P59022 87 aa4.41□□□□□ -1.7
LRCH3-219ENST00000494069 HSD52Q0P140 79 aa4.41□□□□□ -1.7
LRCH3-219ENST00000494069 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
LRCH3-219ENST00000494069 A8MUU9 505 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms