RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 Q8N9P0 234 aaPredicted RBP13.24□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 IGLV8-61A0A075B6I0 122 aa13.24□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 Q75L30 129 aa13.22□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 LRBAP50851 2863 aa13.21□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.29
CHKB-CPT1B-203ENST00000492556 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 MIR22HGQ0VDD5 57 aa13.2□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 LCA10Q71F78 164 aa13.2□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 TNP2Q05952 138 aa13.17□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 TACC2O95359 2948 aa13.17□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 WWC2-AS2Q96NR7 200 aa13.16□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 MMP24-AS1A0A0U1RRL7 71 aa13.16□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 PSORS1C2Q9UIG4 136 aa13.15□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 Q5VV11 94 aa13.15□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 Q96NJ1 140 aa13.15□□□□□ -0.3
CHKB-CPT1B-203ENST00000492556 A0A087WTM6 91 aa13.14□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 APLNQ9ULZ1 77 aa13.13□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 PRR26Q8N8Z3 221 aa13.12□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 TYMSOSQ8TAI1 123 aa13.12□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 LINC00472Q9H8W2 130 aa13.1□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 ATMQ13315 3056 aa13.1□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 LINC01558Q9Y6Z2 57 aa13.1□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 DMXL2Q8TDJ6 3036 aa13.09□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 STAB1Q9NY15 2570 aa13.08□□□□□ -0.31
CHKB-CPT1B-203ENST00000492556 SPRR1BP22528 89 aa13.08□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 TNRC18O15417 2968 aaPredicted RBP13.08□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 TEX15Q9BXT5 2789 aa13.08□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 KRTAP4-16G5E9R7 235 aaPredicted RBP13.06□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 IGLV7-43P04211 117 aa13.05□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 LOC400499M0QZD8 3231 aa13.04□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 ZCCHC13Q8WW36 166 aaKnown RBP13.03□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 RBM12B-AS1Q9P1G2 102 aa13.02□□□□□ -0.32
CHKB-CPT1B-203ENST00000492556 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
CHKB-CPT1B-203ENST00000492556 J3QL48 77 aa12.98□□□□□ -0.33
CHKB-CPT1B-203ENST00000492556 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
CHKB-CPT1B-203ENST00000492556 HRES1P13985 223 aa12.96□□□□□ -0.33
CHKB-CPT1B-203ENST00000492556 HELZ2Q9BYK8 2649 aaKnown RBP12.95□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 SETXQ7Z333 2677 aaKnown RBP12.93□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 KRTAP29-1A8MX34 341 aaPredicted RBP12.92□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 FLNCQ14315 2725 aa12.91□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 DMXL1Q9Y485 3027 aa12.9□□□□□ -0.34
CHKB-CPT1B-203ENST00000492556 LCE6AA0A183 80 aa12.9□□□□□ -0.35
CHKB-CPT1B-203ENST00000492556 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
CHKB-CPT1B-203ENST00000492556 ITPR1Q14643 2758 aa12.87□□□□□ -0.35
CHKB-CPT1B-203ENST00000492556 COL12A1Q99715 3063 aa12.86□□□□□ -0.35
CHKB-CPT1B-203ENST00000492556 SPINK7P58062 85 aa12.85□□□□□ -0.35
CHKB-CPT1B-203ENST00000492556 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
CHKB-CPT1B-203ENST00000492556 LINC00304Q8N9R0 145 aa12.8□□□□□ -0.36
CHKB-CPT1B-203ENST00000492556 Q8N1X5 172 aa12.79□□□□□ -0.36
CHKB-CPT1B-203ENST00000492556 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
CHKB-CPT1B-203ENST00000492556 COX6B2Q6YFQ2 88 aa12.77□□□□□ -0.37
CHKB-CPT1B-203ENST00000492556 Q6ZR54 194 aa12.75□□□□□ -0.37
CHKB-CPT1B-203ENST00000492556 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
CHKB-CPT1B-203ENST00000492556 Q5W150 140 aa12.71□□□□□ -0.37
CHKB-CPT1B-203ENST00000492556 PRAC1Q96KF2 57 aa12.7□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 WDFY3Q8IZQ1 3526 aa12.7□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 SPINT4Q6UDR6 99 aa12.7□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 C9orf92A6NGG3 77 aa12.69□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 LINC01554Q52M75 96 aa12.67□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 UBR5O95071 2799 aaPredicted RBP12.67□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 TEP1Q99973 2627 aaKnown RBP12.67□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 FLG2Q5D862 2391 aaPredicted RBP12.67□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
CHKB-CPT1B-203ENST00000492556 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
CHKB-CPT1B-203ENST00000492556 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
CHKB-CPT1B-203ENST00000492556 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
CHKB-CPT1B-203ENST00000492556 ASH1LQ9NR48 2969 aaKnown RBP12.63□□□□□ -0.39
CHKB-CPT1B-203ENST00000492556 DMAC1Q96GE9 116 aa12.59□□□□□ -0.39
CHKB-CPT1B-203ENST00000492556 ZANQ9Y493 2812 aa12.58□□□□□ -0.4
CHKB-CPT1B-203ENST00000492556 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
CHKB-CPT1B-203ENST00000492556 PANO1I0J062 215 aa12.54□□□□□ -0.4
CHKB-CPT1B-203ENST00000492556 A0A1B0GU33 70 aa12.54□□□□□ -0.4
CHKB-CPT1B-203ENST00000492556 KRTAP11-1Q8IUC1 163 aa12.53□□□□□ -0.4
CHKB-CPT1B-203ENST00000492556 CRIPTQ9P021 101 aa12.5□□□□□ -0.41
CHKB-CPT1B-203ENST00000492556 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
CHKB-CPT1B-203ENST00000492556 A6NN06 94 aa12.49□□□□□ -0.41
CHKB-CPT1B-203ENST00000492556 CSAG1Q6PB30 78 aa12.45□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 A0A087X002 238 aa12.45□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 NOTCH2NLQ7Z3S9 236 aa12.45□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 DMDP11532 3685 aa12.45□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 A8MU10 97 aa12.44□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 ASB16-AS1Q495Z4 193 aa12.41□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 ZFHX4Q86UP3 3567 aa12.41□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 APCP25054 2843 aa12.4□□□□□ -0.42
CHKB-CPT1B-203ENST00000492556 A0A0D9SG42 100 aa12.39□□□□□ -0.43
CHKB-CPT1B-203ENST00000492556 DCHS1Q96JQ0 3298 aa12.38□□□□□ -0.43
CHKB-CPT1B-203ENST00000492556 ASPMQ8IZT6 3477 aa12.38□□□□□ -0.43
CHKB-CPT1B-203ENST00000492556 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
CHKB-CPT1B-203ENST00000492556 SPATA8Q6RVD6 105 aa12.34□□□□□ -0.43
CHKB-CPT1B-203ENST00000492556 KRTAP13-1Q8IUC0 172 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms