RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SPRR4Q96PI1 79 aa2.81□□□□□ -1.96
RTN4-215ENST00000491592 Q9BRP9 147 aa2.81□□□□□ -1.96
RTN4-215ENST00000491592 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
RTN4-215ENST00000491592 WNK1Q9H4A3 2382 aa2.81□□□□□ -1.96
RTN4-215ENST00000491592 C1orf137Q5JT78 98 aa2.8□□□□□ -1.96
RTN4-215ENST00000491592 MYO15AQ9UKN7 3530 aa2.79□□□□□ -1.96
RTN4-215ENST00000491592 A0A096LPF7 62 aa2.79□□□□□ -1.96
RTN4-215ENST00000491592 WFDC10AQ9H1F0 79 aa2.79□□□□□ -1.96
RTN4-215ENST00000491592 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
RTN4-215ENST00000491592 H3BNG1 76 aa2.78□□□□□ -1.96
RTN4-215ENST00000491592 SPART-AS1P0CW21 52 aa2.78□□□□□ -1.96
RTN4-215ENST00000491592 C9orf163Q8N9P6 203 aa2.78□□□□□ -1.96
RTN4-215ENST00000491592 EYSQ5T1H1 3165 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 NUPR2A6NF83 97 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 RTL8CO15255 209 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 CNBPP62633 177 aaKnown RBP2.77□□□□□ -1.97
RTN4-215ENST00000491592 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 Q6ZRX8 168 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 LINC00208Q96KT6 92 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 R4GN34 69 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 DMXL2Q8TDJ6 3036 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 BDP1A6H8Y1 2624 aa2.77□□□□□ -1.97
RTN4-215ENST00000491592 HRNRQ86YZ3 2850 aaPredicted RBP2.77□□□□□ -1.97
RTN4-215ENST00000491592 TACC2O95359 2948 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 LOC400499M0QZD8 3231 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 MGAQ8IWI9 3026 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 SPG11Q96JI7 2443 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 SPRR1AP35321 89 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 ADGRG4Q8IZF6 3080 aa2.76□□□□□ -1.97
RTN4-215ENST00000491592 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
RTN4-215ENST00000491592 WDFY4Q6ZS81 3184 aa2.75□□□□□ -1.97
RTN4-215ENST00000491592 DCHS1Q96JQ0 3298 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 TTC28Q96AY4 2481 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 IGKV2D-24A0A075B6R9 120 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 H0Y9P7 68 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 K7EQZ3 153 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
RTN4-215ENST00000491592 ATRXP46100 2492 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 PRB1P04280 392 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 CEP295Q9C0D2 2601 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
RTN4-215ENST00000491592 ZNF292O60281 2723 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 HTN3P15516 51 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 DEFB135Q30KP9 77 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 LINC01556Q5JQF7 62 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 LRBAP50851 2863 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 AKAP13Q12802 2813 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 TLN2Q9Y4G6 2542 aa2.72□□□□□ -1.97
RTN4-215ENST00000491592 ZFHX2Q9C0A1 2572 aaPredicted RBP2.71□□□□□ -1.98
RTN4-215ENST00000491592 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
RTN4-215ENST00000491592 IGFL1Q6UW32 110 aa2.71□□□□□ -1.98
RTN4-215ENST00000491592 COA5Q86WW8 74 aa2.71□□□□□ -1.98
RTN4-215ENST00000491592 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
RTN4-215ENST00000491592 TP53AIP1Q9HCN2 124 aa2.71□□□□□ -1.98
RTN4-215ENST00000491592 MUC6Q6W4X9 2439 aa2.7□□□□□ -1.98
RTN4-215ENST00000491592 FN1P02751 2386 aaKnown RBP2.7□□□□□ -1.98
RTN4-215ENST00000491592 DEFB4AO15263 64 aa2.7□□□□□ -1.98
RTN4-215ENST00000491592 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
RTN4-215ENST00000491592 DOPEY1Q5JWR5 2465 aa2.7□□□□□ -1.98
RTN4-215ENST00000491592 MYO9AB2RTY4 2548 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 BOD1L1Q8NFC6 3051 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 SPRR1BP22528 89 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 WFDC10BQ8IUB3 73 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 NOTCH2Q04721 2471 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 USP9YO00507 2555 aaPredicted RBP2.69□□□□□ -1.98
RTN4-215ENST00000491592 USP9XQ93008 2570 aaPredicted RBP2.69□□□□□ -1.98
RTN4-215ENST00000491592 ANKRD17O75179 2603 aaKnown RBP2.69□□□□□ -1.98
RTN4-215ENST00000491592 CSMD1Q96PZ7 3565 aa2.69□□□□□ -1.98
RTN4-215ENST00000491592 PTPN13Q12923 2485 aa2.68□□□□□ -1.98
RTN4-215ENST00000491592 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
RTN4-215ENST00000491592 HRES1P13985 223 aa2.68□□□□□ -1.98
RTN4-215ENST00000491592 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
RTN4-215ENST00000491592 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
RTN4-215ENST00000491592 LINC00472Q9H8W2 130 aa2.68□□□□□ -1.98
RTN4-215ENST00000491592 IGF2RP11717 2491 aa2.67□□□□□ -1.98
RTN4-215ENST00000491592 JMJD1CQ15652 2540 aa2.67□□□□□ -1.98
RTN4-215ENST00000491592 DEFB131BA0A096LNP1 70 aa2.67□□□□□ -1.98
RTN4-215ENST00000491592 HIVEP2P31629 2446 aa2.67□□□□□ -1.98
RTN4-215ENST00000491592 NCOR2Q9Y618 2525 aa2.66□□□□□ -1.98
RTN4-215ENST00000491592 PRB2P02812 416 aaPredicted RBP2.66□□□□□ -1.98
RTN4-215ENST00000491592 BSNQ9UPA5 3926 aa2.65□□□□□ -1.98
RTN4-215ENST00000491592 SPENQ96T58 3664 aaKnown RBP2.65□□□□□ -1.99
RTN4-215ENST00000491592 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
RTN4-215ENST00000491592 RPL37AP61513 92 aaKnown RBP2.65□□□□□ -1.99
RTN4-215ENST00000491592 ZFHX4Q86UP3 3567 aa2.65□□□□□ -1.99
RTN4-215ENST00000491592 ATMQ13315 3056 aa2.65□□□□□ -1.99
RTN4-215ENST00000491592 DMDP11532 3685 aa2.64□□□□□ -1.99
RTN4-215ENST00000491592 UQCR11O14957 56 aa2.64□□□□□ -1.99
RTN4-215ENST00000491592 ACACBO00763 2458 aa2.63□□□□□ -1.99
RTN4-215ENST00000491592 ZFYVE26Q68DK2 2539 aa2.63□□□□□ -1.99
RTN4-215ENST00000491592 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
RTN4-215ENST00000491592 A0A0G2JQZ4 141 aa2.63□□□□□ -1.99
RTN4-215ENST00000491592 MAP1AP78559 2803 aaPredicted RBP2.63□□□□□ -1.99
RTN4-215ENST00000491592 DMXL1Q9Y485 3027 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms