RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 UBE2AP49459 152 aa9.83□□□□□ -0.84
BRD9-208ENST00000489816 RPS28P62857 69 aaKnown RBP9.82□□□□□ -0.84
BRD9-208ENST00000489816 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
BRD9-208ENST00000489816 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
BRD9-208ENST00000489816 CNBPP62633 177 aaKnown RBP9.81□□□□□ -0.84
BRD9-208ENST00000489816 BCE1O60756 84 aa9.79□□□□□ -0.84
BRD9-208ENST00000489816 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
BRD9-208ENST00000489816 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
BRD9-208ENST00000489816 PRKDCP78527 4128 aaKnown RBP9.78□□□□□ -0.84
BRD9-208ENST00000489816 NBDYA0A0U1RRE5 68 aa9.77□□□□□ -0.85
BRD9-208ENST00000489816 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.85
BRD9-208ENST00000489816 MEGF8Q7Z7M0 2845 aa9.76□□□□□ -0.85
BRD9-208ENST00000489816 LRCOL1A6NCL2 159 aa9.75□□□□□ -0.85
BRD9-208ENST00000489816 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
BRD9-208ENST00000489816 PRR4Q16378 134 aa9.75□□□□□ -0.85
BRD9-208ENST00000489816 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
BRD9-208ENST00000489816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
BRD9-208ENST00000489816 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
BRD9-208ENST00000489816 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
BRD9-208ENST00000489816 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
BRD9-208ENST00000489816 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
BRD9-208ENST00000489816 Q5XG85 94 aa9.72□□□□□ -0.85
BRD9-208ENST00000489816 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
BRD9-208ENST00000489816 ANAPC11Q9NYG5 84 aa9.71□□□□□ -0.86
BRD9-208ENST00000489816 A0A0U1RQV1 116 aa9.7□□□□□ -0.86
BRD9-208ENST00000489816 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
BRD9-208ENST00000489816 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
BRD9-208ENST00000489816 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
BRD9-208ENST00000489816 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
BRD9-208ENST00000489816 FAM229BQ4G0N7 80 aa9.66□□□□□ -0.86
BRD9-208ENST00000489816 MPLKIPQ8TAP9 179 aa9.66□□□□□ -0.86
BRD9-208ENST00000489816 DNHD1Q96M86 4753 aa9.66□□□□□ -0.86
BRD9-208ENST00000489816 FBN3Q75N90 2809 aa9.65□□□□□ -0.86
BRD9-208ENST00000489816 NDUFC1O43677 76 aa9.65□□□□□ -0.87
BRD9-208ENST00000489816 A0A1B0GW54 56 aa9.64□□□□□ -0.87
BRD9-208ENST00000489816 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
BRD9-208ENST00000489816 H0Y9J4 135 aa9.64□□□□□ -0.87
BRD9-208ENST00000489816 FP248Q71RG6 208 aaPredicted RBP9.63□□□□□ -0.87
BRD9-208ENST00000489816 A0A087WTM6 91 aa9.61□□□□□ -0.87
BRD9-208ENST00000489816 IGLV8-61A0A075B6I0 122 aa9.59□□□□□ -0.87
BRD9-208ENST00000489816 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
BRD9-208ENST00000489816 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
BRD9-208ENST00000489816 VPS13DQ5THJ4 4388 aa9.57□□□□□ -0.88
BRD9-208ENST00000489816 RTL8CO15255 209 aa9.57□□□□□ -0.88
BRD9-208ENST00000489816 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
BRD9-208ENST00000489816 SPACA4Q8TDM5 124 aa9.57□□□□□ -0.88
BRD9-208ENST00000489816 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
BRD9-208ENST00000489816 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
BRD9-208ENST00000489816 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
BRD9-208ENST00000489816 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
BRD9-208ENST00000489816 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
BRD9-208ENST00000489816 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
BRD9-208ENST00000489816 LY6G6CO95867 125 aa9.53□□□□□ -0.88
BRD9-208ENST00000489816 SPRR1BP22528 89 aa9.53□□□□□ -0.88
BRD9-208ENST00000489816 MOBPQ13875 183 aa9.53□□□□□ -0.88
BRD9-208ENST00000489816 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
BRD9-208ENST00000489816 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
BRD9-208ENST00000489816 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
BRD9-208ENST00000489816 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
BRD9-208ENST00000489816 A8MWP4 228 aa9.51□□□□□ -0.89
BRD9-208ENST00000489816 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
BRD9-208ENST00000489816 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
BRD9-208ENST00000489816 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
BRD9-208ENST00000489816 MP68P56378 58 aa9.49□□□□□ -0.89
BRD9-208ENST00000489816 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
BRD9-208ENST00000489816 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
BRD9-208ENST00000489816 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
BRD9-208ENST00000489816 LCE6AA0A183 80 aa9.48□□□□□ -0.89
BRD9-208ENST00000489816 H0Y9P7 68 aa9.48□□□□□ -0.89
BRD9-208ENST00000489816 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
BRD9-208ENST00000489816 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
BRD9-208ENST00000489816 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
BRD9-208ENST00000489816 NDUFS5O43920 106 aa9.45□□□□□ -0.9
BRD9-208ENST00000489816 NDUFB1O75438 58 aa9.43□□□□□ -0.9
BRD9-208ENST00000489816 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
BRD9-208ENST00000489816 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 MMP24-AS1A0A0U1RRL7 71 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 hDV103S1A0JD37 113 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 A0A087X002 238 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 Q6ZR54 194 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
BRD9-208ENST00000489816 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
BRD9-208ENST00000489816 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
BRD9-208ENST00000489816 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
BRD9-208ENST00000489816 Q96NJ1 140 aa9.41□□□□□ -0.9
BRD9-208ENST00000489816 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
BRD9-208ENST00000489816 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
BRD9-208ENST00000489816 ZNF861PO60384 105 aa9.4□□□□□ -0.9
BRD9-208ENST00000489816 PSPHP1O15172 72 aa9.38□□□□□ -0.91
BRD9-208ENST00000489816 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
BRD9-208ENST00000489816 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
BRD9-208ENST00000489816 CDK2AP2O75956 126 aa9.35□□□□□ -0.91
BRD9-208ENST00000489816 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
BRD9-208ENST00000489816 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
BRD9-208ENST00000489816 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
BRD9-208ENST00000489816 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
BRD9-208ENST00000489816 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
BRD9-208ENST00000489816 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
BRD9-208ENST00000489816 A0A1B0GVX0 72 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms