RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 LINC00587B1AMM8 73 aa5.53□□□□□ -1.52
HDAC6-233ENST00000489352 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
HDAC6-233ENST00000489352 PYY3Q5JQD4 70 aa5.53□□□□□ -1.52
HDAC6-233ENST00000489352 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
HDAC6-233ENST00000489352 H0Y8G0 127 aa5.52□□□□□ -1.53
HDAC6-233ENST00000489352 SPRR2EP22531 72 aa5.52□□□□□ -1.53
HDAC6-233ENST00000489352 SPRR2BP35325 72 aa5.52□□□□□ -1.53
HDAC6-233ENST00000489352 SPRR2AP35326 72 aa5.52□□□□□ -1.53
HDAC6-233ENST00000489352 DHRS4-AS1Q9P1J3 65 aa5.52□□□□□ -1.53
HDAC6-233ENST00000489352 PCP4L1A6NKN8 68 aa5.51□□□□□ -1.53
HDAC6-233ENST00000489352 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
HDAC6-233ENST00000489352 C12orf57Q99622 126 aa5.51□□□□□ -1.53
HDAC6-233ENST00000489352 SPANXB1Q9NS25 103 aaPredicted RBP5.51□□□□□ -1.53
HDAC6-233ENST00000489352 TRAV12-1A0A0B4J245 112 aa5.5□□□□□ -1.53
HDAC6-233ENST00000489352 GHRHP01286 108 aa5.5□□□□□ -1.53
HDAC6-233ENST00000489352 LINC01545Q5VT33 79 aa5.5□□□□□ -1.53
HDAC6-233ENST00000489352 CBY1Q9Y3M2 126 aa5.5□□□□□ -1.53
HDAC6-233ENST00000489352 TEX49A0A1B0GTD5 131 aa5.49□□□□□ -1.53
HDAC6-233ENST00000489352 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
HDAC6-233ENST00000489352 HSBP1L1C9JCN9 74 aa5.48□□□□□ -1.53
HDAC6-233ENST00000489352 HERV-K104P63124 156 aa5.48□□□□□ -1.53
HDAC6-233ENST00000489352 C21orf62-AS1Q17RA5 79 aa5.48□□□□□ -1.53
HDAC6-233ENST00000489352 PLNP26678 52 aa5.47□□□□□ -1.53
HDAC6-233ENST00000489352 VAMP8Q9BV40 100 aa5.47□□□□□ -1.53
HDAC6-233ENST00000489352 A8MUU9 505 aa5.46□□□□□ -1.54
HDAC6-233ENST00000489352 DPM2O94777 84 aa5.46□□□□□ -1.54
HDAC6-233ENST00000489352 IGKCP01834 107 aa5.46□□□□□ -1.54
HDAC6-233ENST00000489352 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
HDAC6-233ENST00000489352 HRES1P13985 223 aa5.45□□□□□ -1.54
HDAC6-233ENST00000489352 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
HDAC6-233ENST00000489352 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
HDAC6-233ENST00000489352 C11orf86A6NJI1 115 aa5.44□□□□□ -1.54
HDAC6-233ENST00000489352 TSTD3H0UI37 97 aa5.44□□□□□ -1.54
HDAC6-233ENST00000489352 HERVK_113P61574 105 aa5.44□□□□□ -1.54
HDAC6-233ENST00000489352 SPATA45Q537H7 98 aa5.44□□□□□ -1.54
HDAC6-233ENST00000489352 PAM16Q9Y3D7 125 aa5.44□□□□□ -1.54
HDAC6-233ENST00000489352 PCP4P48539 62 aa5.42□□□□□ -1.54
HDAC6-233ENST00000489352 MYMXA0A1B0GTQ4 84 aa5.41□□□□□ -1.54
HDAC6-233ENST00000489352 NDUFC2O95298 119 aa5.41□□□□□ -1.54
HDAC6-233ENST00000489352 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
HDAC6-233ENST00000489352 TMEM223A0PJW6 202 aa5.39□□□□□ -1.55
HDAC6-233ENST00000489352 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
HDAC6-233ENST00000489352 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
HDAC6-233ENST00000489352 E9PLD3 99 aa5.38□□□□□ -1.55
HDAC6-233ENST00000489352 COX7BP24311 80 aa5.38□□□□□ -1.55
HDAC6-233ENST00000489352 NMUP48645 174 aa5.38□□□□□ -1.55
HDAC6-233ENST00000489352 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
HDAC6-233ENST00000489352 F8WEM9 126 aa5.37□□□□□ -1.55
HDAC6-233ENST00000489352 LST1O00453 97 aa5.37□□□□□ -1.55
HDAC6-233ENST00000489352 COX8AP10176 69 aa5.37□□□□□ -1.55
HDAC6-233ENST00000489352 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
HDAC6-233ENST00000489352 LEPROTO15243 131 aa5.36□□□□□ -1.55
HDAC6-233ENST00000489352 DLEU1O43261 78 aa5.36□□□□□ -1.55
HDAC6-233ENST00000489352 C14orf144Q96I85 54 aa5.36□□□□□ -1.55
HDAC6-233ENST00000489352 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
HDAC6-233ENST00000489352 SPRR2DP22532 72 aa5.35□□□□□ -1.55
HDAC6-233ENST00000489352 ELOF1P60002 83 aaKnown RBP5.35□□□□□ -1.55
HDAC6-233ENST00000489352 J3QQQ9 107 aa5.34□□□□□ -1.55
HDAC6-233ENST00000489352 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
HDAC6-233ENST00000489352 NPC2P61916 151 aa5.33□□□□□ -1.56
HDAC6-233ENST00000489352 ZNF815PA8K554 130 aa5.32□□□□□ -1.56
HDAC6-233ENST00000489352 Q5VV11 94 aa5.32□□□□□ -1.56
HDAC6-233ENST00000489352 IGLV5-48A0A075B6I7 105 aa5.31□□□□□ -1.56
HDAC6-233ENST00000489352 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
HDAC6-233ENST00000489352 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
HDAC6-233ENST00000489352 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
HDAC6-233ENST00000489352 TTTY13Q9BZ97 58 aa5.3□□□□□ -1.56
HDAC6-233ENST00000489352 DSCR10P59022 87 aa5.29□□□□□ -1.56
HDAC6-233ENST00000489352 Q6JHZ5 121 aa5.29□□□□□ -1.56
HDAC6-233ENST00000489352 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
HDAC6-233ENST00000489352 M0R143 59 aa5.28□□□□□ -1.56
HDAC6-233ENST00000489352 HSD52Q0P140 79 aa5.28□□□□□ -1.56
HDAC6-233ENST00000489352 CLEC2BQ92478 149 aa5.28□□□□□ -1.56
HDAC6-233ENST00000489352 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
HDAC6-233ENST00000489352 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 A0A1B0GV90 55 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 TIMM17BO60830 172 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 COPS9Q8WXC6 57 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
HDAC6-233ENST00000489352 MT1BP07438 61 aa5.25□□□□□ -1.57
HDAC6-233ENST00000489352 A0A1W2PNM2 257 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 BATFQ16520 125 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 BVES-AS1Q5T3Y7 98 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 CEND1Q8N111 149 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 SS18L2Q9UHA2 77 aa5.24□□□□□ -1.57
HDAC6-233ENST00000489352 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 A6NDN8 102 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 IFITM1P13164 125 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 LINC00313P59037 77 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 SNHG12Q9BXW3 62 aa5.23□□□□□ -1.57
HDAC6-233ENST00000489352 TRAV13-2A0A0B4J235 113 aa5.22□□□□□ -1.57
HDAC6-233ENST00000489352 EIF4EBP3O60516 100 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms