RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
NELFE-209ENST00000488426 Q6ZQY7 126 aa7.98□□□□□ -1.13
NELFE-209ENST00000488426 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
NELFE-209ENST00000488426 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
NELFE-209ENST00000488426 OXTP01178 125 aa7.97□□□□□ -1.13
NELFE-209ENST00000488426 UBE2BP63146 152 aa7.96□□□□□ -1.13
NELFE-209ENST00000488426 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.13
NELFE-209ENST00000488426 ATOX1O00244 68 aa7.96□□□□□ -1.14
NELFE-209ENST00000488426 HAMPP81172 84 aa7.95□□□□□ -1.14
NELFE-209ENST00000488426 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
NELFE-209ENST00000488426 Q8N1X5 172 aa7.94□□□□□ -1.14
NELFE-209ENST00000488426 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
NELFE-209ENST00000488426 Q9BRP9 147 aa7.94□□□□□ -1.14
NELFE-209ENST00000488426 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
NELFE-209ENST00000488426 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
NELFE-209ENST00000488426 JMJD7-PLA2G4BH0Y9G9 81 aa7.92□□□□□ -1.14
NELFE-209ENST00000488426 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
NELFE-209ENST00000488426 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
NELFE-209ENST00000488426 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
NELFE-209ENST00000488426 H0Y9J4 135 aa7.91□□□□□ -1.14
NELFE-209ENST00000488426 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
NELFE-209ENST00000488426 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
NELFE-209ENST00000488426 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
NELFE-209ENST00000488426 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
NELFE-209ENST00000488426 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
NELFE-209ENST00000488426 BCE1O60756 84 aa7.88□□□□□ -1.15
NELFE-209ENST00000488426 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
NELFE-209ENST00000488426 LAMTOR3Q9UHA4 124 aa7.88□□□□□ -1.15
NELFE-209ENST00000488426 MYCBP2O75592 4640 aa7.88□□□□□ -1.15
NELFE-209ENST00000488426 PRLHP81277 87 aa7.87□□□□□ -1.15
NELFE-209ENST00000488426 IGLV5-48A0A075B6I7 105 aa7.87□□□□□ -1.15
NELFE-209ENST00000488426 DSCR8Q96T75 97 aa7.87□□□□□ -1.15
NELFE-209ENST00000488426 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
NELFE-209ENST00000488426 Q6ZSA8 131 aa7.86□□□□□ -1.15
NELFE-209ENST00000488426 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
NELFE-209ENST00000488426 HERC1Q15751 4861 aa7.86□□□□□ -1.15
NELFE-209ENST00000488426 ERC2-IT1O76042 136 aa7.85□□□□□ -1.15
NELFE-209ENST00000488426 UBE2AP49459 152 aa7.85□□□□□ -1.15
NELFE-209ENST00000488426 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
NELFE-209ENST00000488426 RBM3P98179 157 aaKnown RBP7.85□□□□□ -1.15
NELFE-209ENST00000488426 Q8N377 158 aa7.85□□□□□ -1.15
NELFE-209ENST00000488426 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
NELFE-209ENST00000488426 DEFB105AQ8NG35 78 aa7.84□□□□□ -1.15
NELFE-209ENST00000488426 HIGD2AQ9BW72 106 aa7.84□□□□□ -1.15
NELFE-209ENST00000488426 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
NELFE-209ENST00000488426 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
NELFE-209ENST00000488426 PDE6GP18545 87 aa7.83□□□□□ -1.16
NELFE-209ENST00000488426 CCKP06307 115 aa7.82□□□□□ -1.16
NELFE-209ENST00000488426 Q5VSD8 79 aa7.82□□□□□ -1.16
NELFE-209ENST00000488426 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
NELFE-209ENST00000488426 PSORS1C2Q9UIG4 136 aa7.82□□□□□ -1.16
NELFE-209ENST00000488426 Q6JHZ5 121 aa7.81□□□□□ -1.16
NELFE-209ENST00000488426 SCXQ7RTU7 201 aa7.81□□□□□ -1.16
NELFE-209ENST00000488426 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
NELFE-209ENST00000488426 Q6ZQT0 140 aa7.8□□□□□ -1.16
NELFE-209ENST00000488426 C1orf137Q5JT78 98 aa7.78□□□□□ -1.16
NELFE-209ENST00000488426 SPRR1BP22528 89 aa7.77□□□□□ -1.17
NELFE-209ENST00000488426 SEC61GP60059 68 aa7.77□□□□□ -1.17
NELFE-209ENST00000488426 SMIM29Q86T20 159 aa7.76□□□□□ -1.17
NELFE-209ENST00000488426 SERP1Q9Y6X1 66 aa7.76□□□□□ -1.17
NELFE-209ENST00000488426 ZNF861PO60384 105 aa7.75□□□□□ -1.17
NELFE-209ENST00000488426 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
NELFE-209ENST00000488426 F8WEM9 126 aa7.75□□□□□ -1.17
NELFE-209ENST00000488426 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
NELFE-209ENST00000488426 IGLV7-43P04211 117 aa7.74□□□□□ -1.17
NELFE-209ENST00000488426 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
NELFE-209ENST00000488426 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 IGLV8-61A0A075B6I0 122 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 LINC00846Q9NV44 126 aa7.72□□□□□ -1.17
NELFE-209ENST00000488426 V9GYY9 64 aa7.71□□□□□ -1.18
NELFE-209ENST00000488426 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
NELFE-209ENST00000488426 SMIM26A0A096LP01 95 aa7.69□□□□□ -1.18
NELFE-209ENST00000488426 A0A1B0GW54 56 aa7.69□□□□□ -1.18
NELFE-209ENST00000488426 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
NELFE-209ENST00000488426 A0A087WVE0 104 aa7.68□□□□□ -1.18
NELFE-209ENST00000488426 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
NELFE-209ENST00000488426 UBL5Q9BZL1 73 aa7.68□□□□□ -1.18
NELFE-209ENST00000488426 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
NELFE-209ENST00000488426 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
NELFE-209ENST00000488426 H7BZZ5 65 aa7.67□□□□□ -1.18
NELFE-209ENST00000488426 Q8NBF4 154 aa7.67□□□□□ -1.18
NELFE-209ENST00000488426 PKHD1L1Q86WI1 4243 aa7.66□□□□□ -1.18
NELFE-209ENST00000488426 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
NELFE-209ENST00000488426 C1orf195Q5TG92 126 aa7.66□□□□□ -1.18
NELFE-209ENST00000488426 ATP5EP2Q5VTU8 51 aa7.66□□□□□ -1.18
NELFE-209ENST00000488426 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
NELFE-209ENST00000488426 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
NELFE-209ENST00000488426 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
NELFE-209ENST00000488426 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
NELFE-209ENST00000488426 Q6ZVQ6 151 aa7.62□□□□□ -1.19
NELFE-209ENST00000488426 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
NELFE-209ENST00000488426 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
NELFE-209ENST00000488426 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.19
NELFE-209ENST00000488426 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
NELFE-209ENST00000488426 NREPQ16612 68 aa7.58□□□□□ -1.2
NELFE-209ENST00000488426 A0A0G2JQZ4 141 aa7.58□□□□□ -1.2
NELFE-209ENST00000488426 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms