RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TOGARAM1Q9Y4F4 1720 aa0.41□□□□□ -2.34
HMGB1P36-201ENST00000487709 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 ATP7AQ04656 1500 aa0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 PTPRZ1P23471 2315 aaPredicted RBP0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 SMIM27A0A1W2PRY6 76 aa0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 IGIPA6NJ69 53 aa0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 LMO7Q8WWI1 1683 aa0.4□□□□□ -2.35
HMGB1P36-201ENST00000487709 F8P00451 2351 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 CDC42BPAQ5VT25 1732 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 DDX60Q8IY21 1712 aaKnown RBP0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 LYNX1G3V0Z9 82 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 H0YGG7 62 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 H3BUA1 57 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 LINC00308Q8TCZ7 52 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 SAMD9LQ8IVG5 1584 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 IQGAP1P46940 1657 aa0.39□□□□□ -2.35
HMGB1P36-201ENST00000487709 CHD6Q8TD26 2715 aa0.38□□□□□ -2.35
HMGB1P36-201ENST00000487709 WFDC10BQ8IUB3 73 aa0.38□□□□□ -2.35
HMGB1P36-201ENST00000487709 SMIM2Q9BVW6 85 aa0.38□□□□□ -2.35
HMGB1P36-201ENST00000487709 USF3Q68DE3 2245 aa0.38□□□□□ -2.35
HMGB1P36-201ENST00000487709 KIF21BO75037 1637 aa0.38□□□□□ -2.35
HMGB1P36-201ENST00000487709 MAST4O15021 2626 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 ATRQ13535 2644 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 GVINP1Q7Z2Y8 2422 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 PTPRQQ9UMZ3 2332 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 DUOX1Q9NRD9 1551 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 LINC01546A6NGU7 62 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 H0YAA0 97 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 CRIP1P50238 77 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 DEFB106AQ8N104 65 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 NOP10Q9NPE3 64 aaKnown RBP0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 URB1O60287 2271 aaKnown RBP0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 CLTCL1P53675 1640 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 NFAT5O94916 1531 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 GCC2Q8IWJ2 1684 aa0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 SPTBN1Q01082 2364 aaKnown RBP0.37□□□□□ -2.35
HMGB1P36-201ENST00000487709 NDUFA1O15239 70 aa0.36□□□□□ -2.35
HMGB1P36-201ENST00000487709 PRLHP81277 87 aa0.36□□□□□ -2.35
HMGB1P36-201ENST00000487709 KAAG1Q9UBP8 84 aa0.36□□□□□ -2.35
HMGB1P36-201ENST00000487709 PLCE1Q9P212 2302 aa0.36□□□□□ -2.35
HMGB1P36-201ENST00000487709 MROH2BQ7Z745 1585 aa0.36□□□□□ -2.35
HMGB1P36-201ENST00000487709 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 M0R2T5 61 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 DEFB130BP0DP73 79 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 DEFB130AP0DP74 79 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 DEFB131AP59861 70 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 WT1-ASQ06250 92 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 TFF3Q07654 80 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 DEFB135Q30KP9 77 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 AKAP6Q13023 2319 aa0.35□□□□□ -2.35
HMGB1P36-201ENST00000487709 ANK2Q01484 3957 aa0.34□□□□□ -2.35
HMGB1P36-201ENST00000487709 M0QY20 66 aa0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 RPS27P42677 84 aaKnown RBP0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 RPS27LQ71UM5 84 aaKnown RBP0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 VWFP04275 2813 aa0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 CSMD3Q7Z407 3707 aa0.34□□□□□ -2.36
HMGB1P36-201ENST00000487709 TRANK1O15050 2925 aa0.33□□□□□ -2.36
HMGB1P36-201ENST00000487709 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
HMGB1P36-201ENST00000487709 S4R3F8 94 aa0.33□□□□□ -2.36
HMGB1P36-201ENST00000487709 CACNA1AO00555 2505 aa0.32□□□□□ -2.36
HMGB1P36-201ENST00000487709 IGF2RP11717 2491 aa0.32□□□□□ -2.36
HMGB1P36-201ENST00000487709 AKAP13Q12802 2813 aa0.32□□□□□ -2.36
HMGB1P36-201ENST00000487709 IGSF10Q6WRI0 2623 aa0.32□□□□□ -2.36
HMGB1P36-201ENST00000487709 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 CNOT1A5YKK6 2376 aaKnown RBP0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 IGLV5-48A0A075B6I7 105 aa0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 PRM1P04553 51 aa0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 WNK2Q9Y3S1 2297 aa0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
HMGB1P36-201ENST00000487709 PKD1L1Q8TDX9 2849 aa0.3□□□□□ -2.36
HMGB1P36-201ENST00000487709 MMP24-AS1A0A0U1RRL7 71 aa0.3□□□□□ -2.36
HMGB1P36-201ENST00000487709 A8MTW9 85 aa0.3□□□□□ -2.36
HMGB1P36-201ENST00000487709 TOMM7Q9P0U1 55 aa0.3□□□□□ -2.36
HMGB1P36-201ENST00000487709 HIVEP3Q5T1R4 2406 aa0.3□□□□□ -2.36
HMGB1P36-201ENST00000487709 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 H3BNG1 76 aa0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 M0QZ58 72 aa0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 POLR2KP53803 58 aaKnown RBP0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 RPL39P62891 51 aaKnown RBP0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
HMGB1P36-201ENST00000487709 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 SPTA1P02549 2419 aa0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 KMT2DO14686 5537 aa0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 TNP1P09430 55 aa0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 RPL39LQ96EH5 51 aaKnown RBP0.28□□□□□ -2.36
HMGB1P36-201ENST00000487709 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 BPTFQ12830 3046 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 SPRR2DP22532 72 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 ARHGAP5-AS1Q96IT6 56 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 ABCA2Q9BZC7 2435 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 REV3LO60673 3130 aa0.27□□□□□ -2.37
HMGB1P36-201ENST00000487709 DMBT1Q9UGM3 2413 aaPredicted RBP0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 HECTD1Q9ULT8 2610 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 FLNCQ14315 2725 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms