RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 Q5XG85 94 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 LINC00518Q8N0U6 118 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 PRO1933Q9H354 126 aa4.61□□□□□ -1.67
PRKCB-208ENST00000487674 TEX49A0A1B0GTD5 131 aa4.6□□□□□ -1.67
PRKCB-208ENST00000487674 H7C2G1 150 aa4.6□□□□□ -1.67
PRKCB-208ENST00000487674 TAL2Q16559 108 aa4.6□□□□□ -1.67
PRKCB-208ENST00000487674 LINC01545Q5VT33 79 aa4.6□□□□□ -1.67
PRKCB-208ENST00000487674 TRBV7-6A0A0J9YX20 115 aa4.59□□□□□ -1.67
PRKCB-208ENST00000487674 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.67
PRKCB-208ENST00000487674 DEFB105AQ8NG35 78 aa4.59□□□□□ -1.67
PRKCB-208ENST00000487674 A0A1B0GWB2 263 aa4.58□□□□□ -1.68
PRKCB-208ENST00000487674 AKR1D1P51857 326 aa4.58□□□□□ -1.68
PRKCB-208ENST00000487674 SNRPEP62304 92 aaKnown RBP4.58□□□□□ -1.68
PRKCB-208ENST00000487674 PET117Q6UWS5 81 aa4.58□□□□□ -1.68
PRKCB-208ENST00000487674 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
PRKCB-208ENST00000487674 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
PRKCB-208ENST00000487674 RPL37P61927 97 aaKnown RBP4.57□□□□□ -1.68
PRKCB-208ENST00000487674 C1orf195Q5TG92 126 aa4.57□□□□□ -1.68
PRKCB-208ENST00000487674 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
PRKCB-208ENST00000487674 COPS9Q8WXC6 57 aa4.57□□□□□ -1.68
PRKCB-208ENST00000487674 TTTY13Q9BZ97 58 aa4.57□□□□□ -1.68
PRKCB-208ENST00000487674 HIST1H2BLQ99880 126 aa4.56□□□□□ -1.68
PRKCB-208ENST00000487674 A4D1N5 150 aa4.55□□□□□ -1.68
PRKCB-208ENST00000487674 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
PRKCB-208ENST00000487674 A0A0G2JQZ4 141 aa4.54□□□□□ -1.68
PRKCB-208ENST00000487674 A6NDN8 102 aa4.54□□□□□ -1.68
PRKCB-208ENST00000487674 M0R2T5 61 aa4.54□□□□□ -1.68
PRKCB-208ENST00000487674 IFITM1P13164 125 aa4.54□□□□□ -1.68
PRKCB-208ENST00000487674 COX6B2Q6YFQ2 88 aa4.54□□□□□ -1.68
PRKCB-208ENST00000487674 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
PRKCB-208ENST00000487674 TRIAP1O43715 76 aa4.53□□□□□ -1.68
PRKCB-208ENST00000487674 TCL1BO95988 128 aa4.53□□□□□ -1.68
PRKCB-208ENST00000487674 C3orf79P0CE67 100 aa4.53□□□□□ -1.68
PRKCB-208ENST00000487674 Q6ZVH6 145 aa4.53□□□□□ -1.68
PRKCB-208ENST00000487674 S100A6P06703 90 aa4.52□□□□□ -1.69
PRKCB-208ENST00000487674 KRTDAPP60985 99 aa4.52□□□□□ -1.69
PRKCB-208ENST00000487674 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
PRKCB-208ENST00000487674 C20orf202A1L168 122 aa4.51□□□□□ -1.69
PRKCB-208ENST00000487674 F8WEM9 126 aa4.51□□□□□ -1.69
PRKCB-208ENST00000487674 PYY3Q5JQD4 70 aa4.51□□□□□ -1.69
PRKCB-208ENST00000487674 MUSTN1Q8IVN3 82 aa4.5□□□□□ -1.69
PRKCB-208ENST00000487674 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
PRKCB-208ENST00000487674 FLGP20930 4061 aaPredicted RBP4.49□□□□□ -1.69
PRKCB-208ENST00000487674 PCP2Q8IVA1 136 aa4.49□□□□□ -1.69
PRKCB-208ENST00000487674 SMIM6P0DI80 62 aa4.48□□□□□ -1.69
PRKCB-208ENST00000487674 Q6JHZ5 121 aa4.48□□□□□ -1.69
PRKCB-208ENST00000487674 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
PRKCB-208ENST00000487674 CLEC2BQ92478 149 aa4.48□□□□□ -1.69
PRKCB-208ENST00000487674 TRBV7-7A0A0K0K1E9 115 aa4.47□□□□□ -1.69
PRKCB-208ENST00000487674 VAMP3Q15836 100 aa4.47□□□□□ -1.69
PRKCB-208ENST00000487674 S100A2P29034 98 aa4.46□□□□□ -1.7
PRKCB-208ENST00000487674 LINC00575Q6W349 94 aa4.46□□□□□ -1.7
PRKCB-208ENST00000487674 Q6ZQY7 126 aa4.46□□□□□ -1.7
PRKCB-208ENST00000487674 Q75L30 129 aa4.46□□□□□ -1.7
PRKCB-208ENST00000487674 IGFL1Q6UW32 110 aa4.45□□□□□ -1.7
PRKCB-208ENST00000487674 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
PRKCB-208ENST00000487674 OBSCN-AS1Q96MR7 158 aa4.45□□□□□ -1.7
PRKCB-208ENST00000487674 hADV29S1A0JD25 119 aa4.44□□□□□ -1.7
PRKCB-208ENST00000487674 C12orf57Q99622 126 aa4.44□□□□□ -1.7
PRKCB-208ENST00000487674 OCIAD2Q56VL3 154 aa4.43□□□□□ -1.7
PRKCB-208ENST00000487674 Q6Q795 121 aa4.43□□□□□ -1.7
PRKCB-208ENST00000487674 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
PRKCB-208ENST00000487674 PPDPFLQ8WWR9 84 aa4.43□□□□□ -1.7
PRKCB-208ENST00000487674 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
PRKCB-208ENST00000487674 LST1O00453 97 aa4.41□□□□□ -1.7
PRKCB-208ENST00000487674 SCGB1D1O95968 90 aa4.41□□□□□ -1.7
PRKCB-208ENST00000487674 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
PRKCB-208ENST00000487674 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
PRKCB-208ENST00000487674 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
PRKCB-208ENST00000487674 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
PRKCB-208ENST00000487674 H3BUT2 72 aa4.39□□□□□ -1.71
PRKCB-208ENST00000487674 CFC1P0CG37 223 aa4.39□□□□□ -1.71
PRKCB-208ENST00000487674 Q96NJ1 140 aa4.39□□□□□ -1.71
PRKCB-208ENST00000487674 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
PRKCB-208ENST00000487674 A8MUU9 505 aa4.37□□□□□ -1.71
PRKCB-208ENST00000487674 HIST1H4GQ99525 98 aa4.36□□□□□ -1.71
PRKCB-208ENST00000487674 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
PRKCB-208ENST00000487674 TRBV20-1A0A075B6N2 111 aa4.35□□□□□ -1.71
PRKCB-208ENST00000487674 TEN1Q86WV5 123 aa4.35□□□□□ -1.71
PRKCB-208ENST00000487674 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
PRKCB-208ENST00000487674 SNCGO76070 127 aa4.34□□□□□ -1.71
PRKCB-208ENST00000487674 SPATA45Q537H7 98 aa4.34□□□□□ -1.71
PRKCB-208ENST00000487674 A0A087WSZ3 146 aa4.33□□□□□ -1.72
PRKCB-208ENST00000487674 NDUFV3P56181 108 aaKnown RBP4.33□□□□□ -1.72
PRKCB-208ENST00000487674 C2orf91Q6ZV80 131 aa4.33□□□□□ -1.72
PRKCB-208ENST00000487674 H0YGX0 51 aa4.32□□□□□ -1.72
PRKCB-208ENST00000487674 COX8AP10176 69 aa4.32□□□□□ -1.72
PRKCB-208ENST00000487674 DSCR10P59022 87 aa4.31□□□□□ -1.72
PRKCB-208ENST00000487674 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
PRKCB-208ENST00000487674 C14orf144Q96I85 54 aa4.31□□□□□ -1.72
PRKCB-208ENST00000487674 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
PRKCB-208ENST00000487674 SIGMAR1Q99720 223 aa4.31□□□□□ -1.72
PRKCB-208ENST00000487674 USH2AO75445 5202 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 PCP4L1A6NKN8 68 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 TSTD3H0UI37 97 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 H3BMG7 143 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 DLEU1O43261 78 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
PRKCB-208ENST00000487674 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms