RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TIMM17BO60830 172 aa7.03□□□□□ -1.28
SREBF1-215ENST00000487401 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
SREBF1-215ENST00000487401 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
SREBF1-215ENST00000487401 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
SREBF1-215ENST00000487401 J3QR89 54 aa7.02□□□□□ -1.29
SREBF1-215ENST00000487401 PSMB2P49721 201 aa7.02□□□□□ -1.29
SREBF1-215ENST00000487401 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SREBF1-215ENST00000487401 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
SREBF1-215ENST00000487401 LITAFQ99732 161 aa7.02□□□□□ -1.29
SREBF1-215ENST00000487401 SLC25A20O43772 301 aa7.01□□□□□ -1.29
SREBF1-215ENST00000487401 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
SREBF1-215ENST00000487401 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
SREBF1-215ENST00000487401 OR13C6PQ8NH95 151 aa7.01□□□□□ -1.29
SREBF1-215ENST00000487401 IFITM1P13164 125 aa7□□□□□ -1.29
SREBF1-215ENST00000487401 Q8N377 158 aa7□□□□□ -1.29
SREBF1-215ENST00000487401 ST20-AS1Q8NBB2 130 aa7□□□□□ -1.29
SREBF1-215ENST00000487401 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
SREBF1-215ENST00000487401 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
SREBF1-215ENST00000487401 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
SREBF1-215ENST00000487401 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
SREBF1-215ENST00000487401 TCL1BO95988 128 aa6.98□□□□□ -1.29
SREBF1-215ENST00000487401 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
SREBF1-215ENST00000487401 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
SREBF1-215ENST00000487401 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
SREBF1-215ENST00000487401 DHRS4-AS1Q9P1J3 65 aa6.96□□□□□ -1.3
SREBF1-215ENST00000487401 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
SREBF1-215ENST00000487401 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
SREBF1-215ENST00000487401 PPDPFLQ8WWR9 84 aa6.94□□□□□ -1.3
SREBF1-215ENST00000487401 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
SREBF1-215ENST00000487401 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
SREBF1-215ENST00000487401 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
SREBF1-215ENST00000487401 H7C2G1 150 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 SPRR1BP22528 89 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 COX7BP24311 80 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 Q1RN00 199 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
SREBF1-215ENST00000487401 SIGMAR1Q99720 223 aa6.92□□□□□ -1.3
SREBF1-215ENST00000487401 TRIAP1O43715 76 aa6.91□□□□□ -1.3
SREBF1-215ENST00000487401 SCGB1A1P11684 91 aa6.91□□□□□ -1.3
SREBF1-215ENST00000487401 C6orf99Q4VX62 202 aa6.91□□□□□ -1.3
SREBF1-215ENST00000487401 HRCT1Q6UXD1 115 aa6.91□□□□□ -1.3
SREBF1-215ENST00000487401 LIMD2Q9BT23 127 aa6.91□□□□□ -1.3
SREBF1-215ENST00000487401 C9JAW5 83 aa6.9□□□□□ -1.3
SREBF1-215ENST00000487401 COX6CP09669 75 aa6.9□□□□□ -1.3
SREBF1-215ENST00000487401 LINC01547P58512 204 aaPredicted RBP6.9□□□□□ -1.3
SREBF1-215ENST00000487401 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
SREBF1-215ENST00000487401 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
SREBF1-215ENST00000487401 XP32Q5T750 250 aa6.89□□□□□ -1.31
SREBF1-215ENST00000487401 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
SREBF1-215ENST00000487401 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
SREBF1-215ENST00000487401 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
SREBF1-215ENST00000487401 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
SREBF1-215ENST00000487401 H3BT86 120 aa6.86□□□□□ -1.31
SREBF1-215ENST00000487401 LST1O00453 97 aa6.86□□□□□ -1.31
SREBF1-215ENST00000487401 CD164Q04900 197 aa6.84□□□□□ -1.31
SREBF1-215ENST00000487401 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
SREBF1-215ENST00000487401 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
SREBF1-215ENST00000487401 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
SREBF1-215ENST00000487401 IGLV5-48A0A075B6I7 105 aa6.8□□□□□ -1.32
SREBF1-215ENST00000487401 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
SREBF1-215ENST00000487401 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
SREBF1-215ENST00000487401 TRACP01848 142 aa6.79□□□□□ -1.32
SREBF1-215ENST00000487401 Q5XG85 94 aa6.78□□□□□ -1.32
SREBF1-215ENST00000487401 SMIM11BQ8TCY0 68 aa6.78□□□□□ -1.32
SREBF1-215ENST00000487401 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
SREBF1-215ENST00000487401 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
SREBF1-215ENST00000487401 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
SREBF1-215ENST00000487401 C1orf195Q5TG92 126 aa6.76□□□□□ -1.33
SREBF1-215ENST00000487401 KRTAP9-6A0A140TA67 174 aa6.75□□□□□ -1.33
SREBF1-215ENST00000487401 FAM240AA0A1B0GVK7 77 aa6.75□□□□□ -1.33
SREBF1-215ENST00000487401 F8WEM9 126 aa6.75□□□□□ -1.33
SREBF1-215ENST00000487401 H0YGX0 51 aa6.75□□□□□ -1.33
SREBF1-215ENST00000487401 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
SREBF1-215ENST00000487401 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
SREBF1-215ENST00000487401 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
SREBF1-215ENST00000487401 A0A1B0GV72 72 aa6.71□□□□□ -1.34
SREBF1-215ENST00000487401 hADV29S1A0JD25 119 aa6.71□□□□□ -1.34
SREBF1-215ENST00000487401 ACYP1P07311 99 aa6.71□□□□□ -1.34
SREBF1-215ENST00000487401 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
SREBF1-215ENST00000487401 Q6Q795 121 aa6.71□□□□□ -1.34
SREBF1-215ENST00000487401 SNCGO76070 127 aa6.7□□□□□ -1.34
SREBF1-215ENST00000487401 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
SREBF1-215ENST00000487401 Q6JHZ5 121 aa6.69□□□□□ -1.34
SREBF1-215ENST00000487401 Q6ZQY7 126 aa6.69□□□□□ -1.34
SREBF1-215ENST00000487401 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
SREBF1-215ENST00000487401 A0A1B0GX51 115 aa6.67□□□□□ -1.34
SREBF1-215ENST00000487401 DNAL4O96015 105 aa6.67□□□□□ -1.34
SREBF1-215ENST00000487401 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
SREBF1-215ENST00000487401 OBSCN-AS1Q96MR7 158 aa6.66□□□□□ -1.34
SREBF1-215ENST00000487401 MT1HP80294 61 aa6.65□□□□□ -1.34
SREBF1-215ENST00000487401 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.65□□□□□ -1.34
SREBF1-215ENST00000487401 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
SREBF1-215ENST00000487401 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
SREBF1-215ENST00000487401 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
SREBF1-215ENST00000487401 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
SREBF1-215ENST00000487401 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
SREBF1-215ENST00000487401 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
SREBF1-215ENST00000487401 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
SREBF1-215ENST00000487401 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms