RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 LINC01547P58512 204 aaPredicted RBP7.19□□□□□ -1.26
CHMP3-208ENST00000486404 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
CHMP3-208ENST00000486404 DLEU1O43261 78 aa7.18□□□□□ -1.26
CHMP3-208ENST00000486404 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
CHMP3-208ENST00000486404 LINC00575Q6W349 94 aa7.18□□□□□ -1.26
CHMP3-208ENST00000486404 SMIM29Q86T20 159 aa7.18□□□□□ -1.26
CHMP3-208ENST00000486404 hADV29S1A0JD25 119 aa7.17□□□□□ -1.26
CHMP3-208ENST00000486404 BVES-AS1Q5T3Y7 98 aa7.17□□□□□ -1.26
CHMP3-208ENST00000486404 Q6ZQY7 126 aa7.17□□□□□ -1.26
CHMP3-208ENST00000486404 RAB37Q96AX2 223 aa7.17□□□□□ -1.26
CHMP3-208ENST00000486404 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
CHMP3-208ENST00000486404 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
CHMP3-208ENST00000486404 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
CHMP3-208ENST00000486404 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
CHMP3-208ENST00000486404 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
CHMP3-208ENST00000486404 HIGD1BQ9P298 99 aa7.14□□□□□ -1.27
CHMP3-208ENST00000486404 A0A0G2JQZ4 141 aa7.13□□□□□ -1.27
CHMP3-208ENST00000486404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.13□□□□□ -1.27
CHMP3-208ENST00000486404 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
CHMP3-208ENST00000486404 SNCGO76070 127 aa7.12□□□□□ -1.27
CHMP3-208ENST00000486404 TCL1BO95988 128 aa7.12□□□□□ -1.27
CHMP3-208ENST00000486404 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
CHMP3-208ENST00000486404 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
CHMP3-208ENST00000486404 Q5XG85 94 aa7.11□□□□□ -1.27
CHMP3-208ENST00000486404 Q6JHZ5 121 aa7.11□□□□□ -1.27
CHMP3-208ENST00000486404 CFC1BP0CG36 223 aa7.1□□□□□ -1.27
CHMP3-208ENST00000486404 CFC1P0CG37 223 aa7.1□□□□□ -1.27
CHMP3-208ENST00000486404 C2orf91Q6ZV80 131 aa7.1□□□□□ -1.27
CHMP3-208ENST00000486404 PPDPFLQ8WWR9 84 aa7.1□□□□□ -1.27
CHMP3-208ENST00000486404 CLEC2BQ92478 149 aa7.1□□□□□ -1.27
CHMP3-208ENST00000486404 SNHG12Q9BXW3 62 aa7.09□□□□□ -1.27
CHMP3-208ENST00000486404 CEND1Q8N111 149 aa7.08□□□□□ -1.28
CHMP3-208ENST00000486404 H0YGX0 51 aa7.07□□□□□ -1.28
CHMP3-208ENST00000486404 C1orf195Q5TG92 126 aa7.07□□□□□ -1.28
CHMP3-208ENST00000486404 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
CHMP3-208ENST00000486404 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
CHMP3-208ENST00000486404 OCIAD2Q56VL3 154 aa7.06□□□□□ -1.28
CHMP3-208ENST00000486404 IGFL1Q6UW32 110 aa7.06□□□□□ -1.28
CHMP3-208ENST00000486404 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
CHMP3-208ENST00000486404 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
CHMP3-208ENST00000486404 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
CHMP3-208ENST00000486404 H3BUT2 72 aa7.04□□□□□ -1.28
CHMP3-208ENST00000486404 FXYD2P54710 66 aa7.03□□□□□ -1.28
CHMP3-208ENST00000486404 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
CHMP3-208ENST00000486404 HSD52Q0P140 79 aa7.02□□□□□ -1.29
CHMP3-208ENST00000486404 FAM218AQ96MZ4 157 aa7.02□□□□□ -1.29
CHMP3-208ENST00000486404 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
CHMP3-208ENST00000486404 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
CHMP3-208ENST00000486404 A0A1B0GX51 115 aa6.99□□□□□ -1.29
CHMP3-208ENST00000486404 TRIAP1O43715 76 aa6.99□□□□□ -1.29
CHMP3-208ENST00000486404 DNAL4O96015 105 aa6.99□□□□□ -1.29
CHMP3-208ENST00000486404 PSMB2P49721 201 aa6.99□□□□□ -1.29
CHMP3-208ENST00000486404 NDUFV3P56181 108 aaKnown RBP6.99□□□□□ -1.29
CHMP3-208ENST00000486404 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
CHMP3-208ENST00000486404 K7ERJ3 54 aa6.98□□□□□ -1.29
CHMP3-208ENST00000486404 FABP2P12104 132 aa6.98□□□□□ -1.29
CHMP3-208ENST00000486404 LST1O00453 97 aa6.97□□□□□ -1.29
CHMP3-208ENST00000486404 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
CHMP3-208ENST00000486404 H3BMG7 143 aa6.95□□□□□ -1.3
CHMP3-208ENST00000486404 COX6CP09669 75 aa6.95□□□□□ -1.3
CHMP3-208ENST00000486404 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
CHMP3-208ENST00000486404 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
CHMP3-208ENST00000486404 Q6Q795 121 aa6.94□□□□□ -1.3
CHMP3-208ENST00000486404 TEN1Q86WV5 123 aa6.94□□□□□ -1.3
CHMP3-208ENST00000486404 ORMDL1Q9P0S3 153 aa6.94□□□□□ -1.3
CHMP3-208ENST00000486404 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
CHMP3-208ENST00000486404 OBSCN-AS1Q96MR7 158 aa6.92□□□□□ -1.3
CHMP3-208ENST00000486404 A0A087WSZ3 146 aa6.91□□□□□ -1.3
CHMP3-208ENST00000486404 A0A1B0GV72 72 aa6.91□□□□□ -1.3
CHMP3-208ENST00000486404 H3BQ85 93 aa6.91□□□□□ -1.3
CHMP3-208ENST00000486404 C21orf62-AS1Q17RA5 79 aa6.88□□□□□ -1.31
CHMP3-208ENST00000486404 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
CHMP3-208ENST00000486404 TMEM256-PLSCR3K7ERE1 68 aa6.87□□□□□ -1.31
CHMP3-208ENST00000486404 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
CHMP3-208ENST00000486404 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
CHMP3-208ENST00000486404 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
CHMP3-208ENST00000486404 Q96NJ1 140 aa6.85□□□□□ -1.31
CHMP3-208ENST00000486404 A0A1W2PNM2 257 aa6.84□□□□□ -1.31
CHMP3-208ENST00000486404 TRACP01848 142 aa6.84□□□□□ -1.31
CHMP3-208ENST00000486404 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.31
CHMP3-208ENST00000486404 Q75L30 129 aa6.84□□□□□ -1.31
CHMP3-208ENST00000486404 TRBV7-4A0A0J9YYF1 115 aa6.83□□□□□ -1.32
CHMP3-208ENST00000486404 M0R143 59 aa6.83□□□□□ -1.32
CHMP3-208ENST00000486404 CCKP06307 115 aa6.82□□□□□ -1.32
CHMP3-208ENST00000486404 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
CHMP3-208ENST00000486404 UBE2V1Q13404 147 aa6.81□□□□□ -1.32
CHMP3-208ENST00000486404 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
CHMP3-208ENST00000486404 SMIM6P0DI80 62 aa6.8□□□□□ -1.32
CHMP3-208ENST00000486404 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
CHMP3-208ENST00000486404 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
CHMP3-208ENST00000486404 DSCR10P59022 87 aa6.79□□□□□ -1.32
CHMP3-208ENST00000486404 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
CHMP3-208ENST00000486404 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
CHMP3-208ENST00000486404 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
CHMP3-208ENST00000486404 MT1HP80294 61 aa6.77□□□□□ -1.33
CHMP3-208ENST00000486404 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
CHMP3-208ENST00000486404 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
CHMP3-208ENST00000486404 ATXN8Q156A1 80 aa6.76□□□□□ -1.33
CHMP3-208ENST00000486404 A8MUU9 505 aa6.75□□□□□ -1.33
CHMP3-208ENST00000486404 M0R2T5 61 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms