RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 CFC1BP0CG36 223 aa10.77□□□□□ -0.69
SNX5-213ENST00000486039 CFC1P0CG37 223 aa10.77□□□□□ -0.69
SNX5-213ENST00000486039 XP32Q5T750 250 aa10.77□□□□□ -0.69
SNX5-213ENST00000486039 Q5XG85 94 aa10.77□□□□□ -0.69
SNX5-213ENST00000486039 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
SNX5-213ENST00000486039 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
SNX5-213ENST00000486039 UQCR10Q9UDW1 63 aa10.75□□□□□ -0.69
SNX5-213ENST00000486039 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
SNX5-213ENST00000486039 KRTAP4-1Q9BYQ7 146 aa10.73□□□□□ -0.69
SNX5-213ENST00000486039 F8WEM9 126 aa10.72□□□□□ -0.69
SNX5-213ENST00000486039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.72□□□□□ -0.69
SNX5-213ENST00000486039 CEND1Q8N111 149 aa10.72□□□□□ -0.69
SNX5-213ENST00000486039 RAB37Q96AX2 223 aa10.72□□□□□ -0.69
SNX5-213ENST00000486039 A0A0B4J2C4 111 aa10.71□□□□□ -0.69
SNX5-213ENST00000486039 TMEM238LA0A1B0GVL6 79 aa10.71□□□□□ -0.69
SNX5-213ENST00000486039 A6NJY4 79 aa10.71□□□□□ -0.69
SNX5-213ENST00000486039 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
SNX5-213ENST00000486039 HSD52Q0P140 79 aa10.7□□□□□ -0.7
SNX5-213ENST00000486039 IGLV8-61A0A075B6I0 122 aa10.69□□□□□ -0.7
SNX5-213ENST00000486039 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
SNX5-213ENST00000486039 LOC105371267A0A1B0GV96 52 aa10.67□□□□□ -0.7
SNX5-213ENST00000486039 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
SNX5-213ENST00000486039 Q6JHZ5 121 aa10.66□□□□□ -0.7
SNX5-213ENST00000486039 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
SNX5-213ENST00000486039 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
SNX5-213ENST00000486039 FAM218AQ96MZ4 157 aa10.65□□□□□ -0.7
SNX5-213ENST00000486039 FXYD2P54710 66 aa10.64□□□□□ -0.71
SNX5-213ENST00000486039 CLEC2BQ92478 149 aa10.64□□□□□ -0.71
SNX5-213ENST00000486039 H0YGX0 51 aa10.63□□□□□ -0.71
SNX5-213ENST00000486039 TCL1BO95988 128 aa10.63□□□□□ -0.71
SNX5-213ENST00000486039 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
SNX5-213ENST00000486039 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
SNX5-213ENST00000486039 TRBV7-7A0A0K0K1E9 115 aa10.6□□□□□ -0.71
SNX5-213ENST00000486039 H3BUT2 72 aa10.59□□□□□ -0.71
SNX5-213ENST00000486039 TSTD3H0UI37 97 aa10.57□□□□□ -0.72
SNX5-213ENST00000486039 SNCGO76070 127 aa10.57□□□□□ -0.72
SNX5-213ENST00000486039 PCOTHQ58A44 107 aa10.57□□□□□ -0.72
SNX5-213ENST00000486039 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
SNX5-213ENST00000486039 A0A1B0GX51 115 aa10.54□□□□□ -0.72
SNX5-213ENST00000486039 TRIAP1O43715 76 aa10.54□□□□□ -0.72
SNX5-213ENST00000486039 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
SNX5-213ENST00000486039 K7ERJ3 54 aa10.52□□□□□ -0.73
SNX5-213ENST00000486039 M0R143 59 aa10.52□□□□□ -0.73
SNX5-213ENST00000486039 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
SNX5-213ENST00000486039 Q6Q795 121 aa10.48□□□□□ -0.73
SNX5-213ENST00000486039 FABP2P12104 132 aa10.47□□□□□ -0.73
SNX5-213ENST00000486039 PSMB2P49721 201 aa10.47□□□□□ -0.73
SNX5-213ENST00000486039 H3BMG7 143 aa10.46□□□□□ -0.73
SNX5-213ENST00000486039 GHRHP01286 108 aa10.46□□□□□ -0.73
SNX5-213ENST00000486039 LST1O00453 97 aa10.45□□□□□ -0.74
SNX5-213ENST00000486039 COX6CP09669 75 aa10.45□□□□□ -0.74
SNX5-213ENST00000486039 TEN1Q86WV5 123 aa10.45□□□□□ -0.74
SNX5-213ENST00000486039 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
SNX5-213ENST00000486039 LCE2CQ5TA81 110 aa10.43□□□□□ -0.74
SNX5-213ENST00000486039 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
SNX5-213ENST00000486039 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
SNX5-213ENST00000486039 A0A087WSZ3 146 aa10.4□□□□□ -0.74
SNX5-213ENST00000486039 ORMDL1Q9P0S3 153 aa10.4□□□□□ -0.74
SNX5-213ENST00000486039 DNAL4O96015 105 aa10.39□□□□□ -0.75
SNX5-213ENST00000486039 OBSCN-AS1Q96MR7 158 aa10.39□□□□□ -0.75
SNX5-213ENST00000486039 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
SNX5-213ENST00000486039 SCGB1C2P0DMR2 95 aa10.36□□□□□ -0.75
SNX5-213ENST00000486039 BATFQ16520 125 aa10.35□□□□□ -0.75
SNX5-213ENST00000486039 Q96NJ1 140 aa10.35□□□□□ -0.75
SNX5-213ENST00000486039 H3BQ85 93 aa10.34□□□□□ -0.75
SNX5-213ENST00000486039 A0A1B0GV72 72 aa10.33□□□□□ -0.76
SNX5-213ENST00000486039 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
SNX5-213ENST00000486039 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
SNX5-213ENST00000486039 Q75L30 129 aa10.32□□□□□ -0.76
SNX5-213ENST00000486039 TRACP01848 142 aa10.3□□□□□ -0.76
SNX5-213ENST00000486039 MT1HP80294 61 aa10.3□□□□□ -0.76
SNX5-213ENST00000486039 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
SNX5-213ENST00000486039 UBE2V1Q13404 147 aa10.28□□□□□ -0.76
SNX5-213ENST00000486039 LYRM7Q5U5X0 104 aa10.26□□□□□ -0.77
SNX5-213ENST00000486039 ATP11AUNQ6ZP68 121 aa10.26□□□□□ -0.77
SNX5-213ENST00000486039 NAA38Q9BRA0 125 aaKnown RBP10.25□□□□□ -0.77
SNX5-213ENST00000486039 FSIP2Q5CZC0 6907 aa10.24□□□□□ -0.77
SNX5-213ENST00000486039 CCKP06307 115 aa10.23□□□□□ -0.77
SNX5-213ENST00000486039 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
SNX5-213ENST00000486039 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
SNX5-213ENST00000486039 CRCT1Q9UGL9 99 aa10.22□□□□□ -0.77
SNX5-213ENST00000486039 A8MUU9 505 aa10.21□□□□□ -0.77
SNX5-213ENST00000486039 DSCR10P59022 87 aa10.21□□□□□ -0.77
SNX5-213ENST00000486039 SIGMAR1Q99720 223 aa10.21□□□□□ -0.77
SNX5-213ENST00000486039 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
SNX5-213ENST00000486039 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
SNX5-213ENST00000486039 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
SNX5-213ENST00000486039 C9orf118A6NHY6 69 aa10.18□□□□□ -0.78
SNX5-213ENST00000486039 BAALC-AS2P0C853 105 aa10.18□□□□□ -0.78
SNX5-213ENST00000486039 TRBV20-1A0A075B6N2 111 aa10.17□□□□□ -0.78
SNX5-213ENST00000486039 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
SNX5-213ENST00000486039 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
SNX5-213ENST00000486039 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.78
SNX5-213ENST00000486039 COX6B2Q6YFQ2 88 aa10.15□□□□□ -0.78
SNX5-213ENST00000486039 VPS25Q9BRG1 176 aa10.15□□□□□ -0.78
SNX5-213ENST00000486039 LINC00313P59037 77 aa10.14□□□□□ -0.79
SNX5-213ENST00000486039 KRTAP10-6P60371 365 aaPredicted RBP10.14□□□□□ -0.79
SNX5-213ENST00000486039 DSCR8Q96T75 97 aa10.14□□□□□ -0.79
SNX5-213ENST00000486039 A0A1W2PPM0 123 aa10.13□□□□□ -0.79
SNX5-213ENST00000486039 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms