RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
SREBF1-213ENST00000485080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.13□□□□□ -0.79
SREBF1-213ENST00000485080 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-213ENST00000485080 Q1RN00 199 aa10.12□□□□□ -0.79
SREBF1-213ENST00000485080 Q6ZQY7 126 aa10.12□□□□□ -0.79
SREBF1-213ENST00000485080 FP248Q71RG6 208 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-213ENST00000485080 CD164Q04900 197 aa10.11□□□□□ -0.79
SREBF1-213ENST00000485080 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
SREBF1-213ENST00000485080 RETNLBQ9BQ08 111 aa10.11□□□□□ -0.79
SREBF1-213ENST00000485080 PRO1933Q9H354 126 aa10.11□□□□□ -0.79
SREBF1-213ENST00000485080 A0A1B0GX51 115 aa10.08□□□□□ -0.8
SREBF1-213ENST00000485080 SNCGO76070 127 aa10.08□□□□□ -0.8
SREBF1-213ENST00000485080 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
SREBF1-213ENST00000485080 LOC105371267A0A1B0GV96 52 aa10.07□□□□□ -0.8
SREBF1-213ENST00000485080 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
SREBF1-213ENST00000485080 OCIAD2Q56VL3 154 aa10.06□□□□□ -0.8
SREBF1-213ENST00000485080 IGLV8-61A0A075B6I0 122 aa10.05□□□□□ -0.8
SREBF1-213ENST00000485080 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
SREBF1-213ENST00000485080 TRIAP1O43715 76 aa10.04□□□□□ -0.8
SREBF1-213ENST00000485080 K7ERJ3 54 aa10.03□□□□□ -0.8
SREBF1-213ENST00000485080 Q5XG85 94 aa10.03□□□□□ -0.8
SREBF1-213ENST00000485080 LIMD2Q9BT23 127 aa10.03□□□□□ -0.8
SREBF1-213ENST00000485080 RNF213Q63HN8 5207 aa10.02□□□□□ -0.8
SREBF1-213ENST00000485080 F8WEM9 126 aa10.02□□□□□ -0.81
SREBF1-213ENST00000485080 GHRHP01286 108 aa10□□□□□ -0.81
SREBF1-213ENST00000485080 Q6JHZ5 121 aa10□□□□□ -0.81
SREBF1-213ENST00000485080 COX6CP09669 75 aa9.98□□□□□ -0.81
SREBF1-213ENST00000485080 SNHG12Q9BXW3 62 aa9.98□□□□□ -0.81
SREBF1-213ENST00000485080 PSMB2P49721 201 aa9.97□□□□□ -0.81
SREBF1-213ENST00000485080 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
SREBF1-213ENST00000485080 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
SREBF1-213ENST00000485080 M0R143 59 aa9.96□□□□□ -0.82
SREBF1-213ENST00000485080 KRTAP13-3Q3SY46 172 aa9.96□□□□□ -0.82
SREBF1-213ENST00000485080 CLEC2BQ92478 149 aa9.95□□□□□ -0.82
SREBF1-213ENST00000485080 A0A0G2JQZ4 141 aa9.94□□□□□ -0.82
SREBF1-213ENST00000485080 TSTD3H0UI37 97 aa9.94□□□□□ -0.82
SREBF1-213ENST00000485080 H3BQ85 93 aa9.94□□□□□ -0.82
SREBF1-213ENST00000485080 CDIP1Q9H305 208 aa9.94□□□□□ -0.82
SREBF1-213ENST00000485080 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
SREBF1-213ENST00000485080 NDUFV3P56181 108 aaKnown RBP9.91□□□□□ -0.82
SREBF1-213ENST00000485080 DNAL4O96015 105 aa9.9□□□□□ -0.82
SREBF1-213ENST00000485080 TCL1BO95988 128 aa9.89□□□□□ -0.83
SREBF1-213ENST00000485080 MUC2Q02817 5179 aa9.88□□□□□ -0.83
SREBF1-213ENST00000485080 TRBV7-7A0A0K0K1E9 115 aa9.88□□□□□ -0.83
SREBF1-213ENST00000485080 TRACP01848 142 aa9.88□□□□□ -0.83
SREBF1-213ENST00000485080 ASB16-AS1Q495Z4 193 aa9.88□□□□□ -0.83
SREBF1-213ENST00000485080 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
SREBF1-213ENST00000485080 H3BUT2 72 aa9.87□□□□□ -0.83
SREBF1-213ENST00000485080 LST1O00453 97 aa9.87□□□□□ -0.83
SREBF1-213ENST00000485080 C1orf195Q5TG92 126 aa9.87□□□□□ -0.83
SREBF1-213ENST00000485080 Q6Q795 121 aa9.87□□□□□ -0.83
SREBF1-213ENST00000485080 TMEM256-PLSCR3K7ERE1 68 aa9.86□□□□□ -0.83
SREBF1-213ENST00000485080 SCGB1C2P0DMR2 95 aa9.86□□□□□ -0.83
SREBF1-213ENST00000485080 FABP2P12104 132 aa9.86□□□□□ -0.83
SREBF1-213ENST00000485080 H3BMG7 143 aa9.85□□□□□ -0.83
SREBF1-213ENST00000485080 UBE2V1Q13404 147 aa9.82□□□□□ -0.84
SREBF1-213ENST00000485080 TEN1Q86WV5 123 aa9.82□□□□□ -0.84
SREBF1-213ENST00000485080 XP32Q5T750 250 aa9.79□□□□□ -0.84
SREBF1-213ENST00000485080 SS18L2Q9UHA2 77 aa9.76□□□□□ -0.85
SREBF1-213ENST00000485080 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
SREBF1-213ENST00000485080 LYRM7Q5U5X0 104 aa9.74□□□□□ -0.85
SREBF1-213ENST00000485080 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
SREBF1-213ENST00000485080 A0A1W2PNM2 257 aa9.73□□□□□ -0.85
SREBF1-213ENST00000485080 NAA38Q9BRA0 125 aaKnown RBP9.73□□□□□ -0.85
SREBF1-213ENST00000485080 TRBV7-4A0A0J9YYF1 115 aa9.72□□□□□ -0.85
SREBF1-213ENST00000485080 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
SREBF1-213ENST00000485080 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
SREBF1-213ENST00000485080 BATFQ16520 125 aa9.72□□□□□ -0.85
SREBF1-213ENST00000485080 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.86
SREBF1-213ENST00000485080 A0A087WSZ3 146 aa9.7□□□□□ -0.86
SREBF1-213ENST00000485080 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
SREBF1-213ENST00000485080 C9orf118A6NHY6 69 aa9.68□□□□□ -0.86
SREBF1-213ENST00000485080 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
SREBF1-213ENST00000485080 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
SREBF1-213ENST00000485080 CCKP06307 115 aa9.65□□□□□ -0.86
SREBF1-213ENST00000485080 A0A1B0GV72 72 aa9.64□□□□□ -0.87
SREBF1-213ENST00000485080 Q96NJ1 140 aa9.64□□□□□ -0.87
SREBF1-213ENST00000485080 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
SREBF1-213ENST00000485080 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
SREBF1-213ENST00000485080 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
SREBF1-213ENST00000485080 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
SREBF1-213ENST00000485080 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
SREBF1-213ENST00000485080 LOC100996750A0A140TA64 210 aa9.6□□□□□ -0.87
SREBF1-213ENST00000485080 C9JAW5 83 aa9.6□□□□□ -0.87
SREBF1-213ENST00000485080 KRTAP4-6Q9BYQ5 205 aa9.6□□□□□ -0.87
SREBF1-213ENST00000485080 C21orf62-AS1Q17RA5 79 aa9.59□□□□□ -0.87
SREBF1-213ENST00000485080 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
SREBF1-213ENST00000485080 PDE6GP18545 87 aa9.57□□□□□ -0.88
SREBF1-213ENST00000485080 RPL37P61927 97 aaKnown RBP9.57□□□□□ -0.88
SREBF1-213ENST00000485080 OBSCN-AS1Q96MR7 158 aa9.57□□□□□ -0.88
SREBF1-213ENST00000485080 LINC00472Q9H8W2 130 aa9.57□□□□□ -0.88
SREBF1-213ENST00000485080 A0A1B0GW54 56 aa9.56□□□□□ -0.88
SREBF1-213ENST00000485080 COL5A1-AS1Q5SY13 56 aa9.55□□□□□ -0.88
SREBF1-213ENST00000485080 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
SREBF1-213ENST00000485080 H3BT86 120 aa9.54□□□□□ -0.88
SREBF1-213ENST00000485080 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
SREBF1-213ENST00000485080 Q6ZQT0 140 aa9.54□□□□□ -0.88
SREBF1-213ENST00000485080 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
SREBF1-213ENST00000485080 VPS25Q9BRG1 176 aa9.53□□□□□ -0.88
SREBF1-213ENST00000485080 Q75L30 129 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms