RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
RC3H1-205ENST00000484867 CSPG4Q6UVK1 2322 aa0.97□□□□□ -2.25
RC3H1-205ENST00000484867 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
RC3H1-205ENST00000484867 WFDC10BQ8IUB3 73 aa0.96□□□□□ -2.26
RC3H1-205ENST00000484867 PIEZO2Q9H5I5 2752 aa0.96□□□□□ -2.26
RC3H1-205ENST00000484867 SPTBN1Q01082 2364 aaKnown RBP0.96□□□□□ -2.26
RC3H1-205ENST00000484867 C2CD3Q4AC94 2353 aa0.96□□□□□ -2.26
RC3H1-205ENST00000484867 NCOR1O75376 2440 aa0.95□□□□□ -2.26
RC3H1-205ENST00000484867 A8MTW9 85 aa0.95□□□□□ -2.26
RC3H1-205ENST00000484867 DEFB108AA8MXU0 73 aa0.95□□□□□ -2.26
RC3H1-205ENST00000484867 COX6B2Q6YFQ2 88 aa0.95□□□□□ -2.26
RC3H1-205ENST00000484867 GVINP1Q7Z2Y8 2422 aa0.95□□□□□ -2.26
RC3H1-205ENST00000484867 WNK1Q9H4A3 2382 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 DSPP15924 2871 aaKnown RBP0.94□□□□□ -2.26
RC3H1-205ENST00000484867 SPTA1P02549 2419 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 FAM208BQ5VWN6 2430 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 CREBBPQ92793 2442 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 ABCA12Q86UK0 2595 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 PRCDQ00LT1 54 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 RPL39P5Q59GN2 51 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 KAAG1Q9UBP8 84 aa0.94□□□□□ -2.26
RC3H1-205ENST00000484867 H0YAA0 97 aa0.93□□□□□ -2.26
RC3H1-205ENST00000484867 SPRR1AP35321 89 aa0.93□□□□□ -2.26
RC3H1-205ENST00000484867 MINOS1Q5TGZ0 78 aa0.93□□□□□ -2.26
RC3H1-205ENST00000484867 TOMM7Q9P0U1 55 aa0.93□□□□□ -2.26
RC3H1-205ENST00000484867 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
RC3H1-205ENST00000484867 A0A0D9SG42 100 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 LYNX1G3V0Z9 82 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 DEFB105AQ8NG35 78 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 PRO0255Q9UI72 69 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 F8P00451 2351 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
RC3H1-205ENST00000484867 M0QY20 66 aa0.91□□□□□ -2.26
RC3H1-205ENST00000484867 WT1-ASQ06250 92 aa0.91□□□□□ -2.26
RC3H1-205ENST00000484867 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
RC3H1-205ENST00000484867 APLNQ9ULZ1 77 aa0.91□□□□□ -2.26
RC3H1-205ENST00000484867 CEP250Q9BV73 2442 aa0.9□□□□□ -2.26
RC3H1-205ENST00000484867 CHD7Q9P2D1 2997 aa0.9□□□□□ -2.26
RC3H1-205ENST00000484867 APELAP0DMC3 54 aa0.9□□□□□ -2.27
RC3H1-205ENST00000484867 DEFB130BP0DP73 79 aa0.9□□□□□ -2.27
RC3H1-205ENST00000484867 DEFB130AP0DP74 79 aa0.9□□□□□ -2.27
RC3H1-205ENST00000484867 H1FX-AS1Q4G0G2 97 aa0.9□□□□□ -2.27
RC3H1-205ENST00000484867 MGAQ8IWI9 3026 aa0.9□□□□□ -2.27
RC3H1-205ENST00000484867 AKAP6Q13023 2319 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 SRRM2Q9UQ35 2752 aaKnown RBP0.89□□□□□ -2.27
RC3H1-205ENST00000484867 SPRR1BP22528 89 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 Q5VSD8 79 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 AKAP13Q12802 2813 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 ABCA2Q9BZC7 2435 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 UBR5O95071 2799 aaPredicted RBP0.89□□□□□ -2.27
RC3H1-205ENST00000484867 TTC28Q96AY4 2481 aa0.89□□□□□ -2.27
RC3H1-205ENST00000484867 SPTBN4Q9H254 2564 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 DEFB1P60022 68 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 TMEM167AQ8TBQ9 72 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 ZNF292O60281 2723 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 CEP290O15078 2479 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 CCDC168Q8NDH2 2452 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 NBASA2RRP1 2371 aa0.88□□□□□ -2.27
RC3H1-205ENST00000484867 APC2O95996 2303 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 PKD1L2Q7Z442 2459 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 IGLV5-48A0A075B6I7 105 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 SPINK1P00995 79 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 PRLHP81277 87 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 KLK9Q2XQG4 91 aa0.87□□□□□ -2.27
RC3H1-205ENST00000484867 ASH1LQ9NR48 2969 aaKnown RBP0.87□□□□□ -2.27
RC3H1-205ENST00000484867 DMBT1Q9UGM3 2413 aaPredicted RBP0.87□□□□□ -2.27
RC3H1-205ENST00000484867 CACNA1HO95180 2353 aa0.86□□□□□ -2.27
RC3H1-205ENST00000484867 K7EIM0 57 aa0.86□□□□□ -2.27
RC3H1-205ENST00000484867 EP300Q09472 2414 aaPredicted RBP0.86□□□□□ -2.27
RC3H1-205ENST00000484867 REV3LO60673 3130 aa0.85□□□□□ -2.27
RC3H1-205ENST00000484867 CLPSL2Q6UWE3 100 aa0.85□□□□□ -2.27
RC3H1-205ENST00000484867 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.27
RC3H1-205ENST00000484867 OTOGQ6ZRI0 2925 aa0.84□□□□□ -2.27
RC3H1-205ENST00000484867 SRCAPQ6ZRS2 3230 aa0.84□□□□□ -2.28
RC3H1-205ENST00000484867 CHD6Q8TD26 2715 aa0.84□□□□□ -2.28
RC3H1-205ENST00000484867 TENM2Q9NT68 2774 aa0.84□□□□□ -2.28
RC3H1-205ENST00000484867 ATRQ13535 2644 aa0.84□□□□□ -2.28
RC3H1-205ENST00000484867 HECTD1Q9ULT8 2610 aa0.84□□□□□ -2.28
RC3H1-205ENST00000484867 H0YGG7 62 aa0.83□□□□□ -2.28
RC3H1-205ENST00000484867 TRANK1O15050 2925 aa0.83□□□□□ -2.28
RC3H1-205ENST00000484867 COL6A5A8TX70 2615 aa0.82□□□□□ -2.28
RC3H1-205ENST00000484867 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
RC3H1-205ENST00000484867 MAP1BP46821 2468 aaKnown RBP0.81□□□□□ -2.28
RC3H1-205ENST00000484867 HTN1P15515 57 aa0.81□□□□□ -2.28
RC3H1-205ENST00000484867 DEFB131AP59861 70 aa0.81□□□□□ -2.28
RC3H1-205ENST00000484867 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
RC3H1-205ENST00000484867 WDR87Q6ZQQ6 2873 aa0.81□□□□□ -2.28
RC3H1-205ENST00000484867 SETD2Q9BYW2 2564 aaPredicted RBP0.81□□□□□ -2.28
RC3H1-205ENST00000484867 RIF1Q5UIP0 2472 aaKnown RBP0.8□□□□□ -2.28
RC3H1-205ENST00000484867 BDP1A6H8Y1 2624 aa0.8□□□□□ -2.28
RC3H1-205ENST00000484867 DEFB136Q30KP8 78 aa0.8□□□□□ -2.28
RC3H1-205ENST00000484867 DEFB108BQ8NET1 73 aa0.8□□□□□ -2.28
RC3H1-205ENST00000484867 S4R3F8 94 aa0.8□□□□□ -2.28
RC3H1-205ENST00000484867 POLQO75417 2590 aa0.8□□□□□ -2.28
RC3H1-205ENST00000484867 DEFB110Q30KQ9 67 aa0.79□□□□□ -2.28
RC3H1-205ENST00000484867 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
RC3H1-205ENST00000484867 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms