RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 K7EIL1 84 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 Q5VSD8 79 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB119Q8N690 84 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 PLCE1Q9P212 2302 aa0.79□□□□□ -2.28
ITGB1-213ENST00000484088 ASCC3Q8N3C0 2202 aaKnown RBP0.79□□□□□ -2.28
ITGB1-213ENST00000484088 DEFB104AQ8WTQ1 72 aa0.78□□□□□ -2.28
ITGB1-213ENST00000484088 COX14Q96I36 57 aa0.78□□□□□ -2.28
ITGB1-213ENST00000484088 ICE1Q9Y2F5 2266 aa0.78□□□□□ -2.28
ITGB1-213ENST00000484088 DOPEY2Q9Y3R5 2298 aa0.78□□□□□ -2.28
ITGB1-213ENST00000484088 CNTRLQ7Z7A1 2325 aa0.78□□□□□ -2.28
ITGB1-213ENST00000484088 PTPRQQ9UMZ3 2332 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 FAM208BQ5VWN6 2430 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 J3QKU1 62 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 SPRR1BP22528 89 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 SPRR1AP35321 89 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
ITGB1-213ENST00000484088 STATHP02808 62 aa0.76□□□□□ -2.29
ITGB1-213ENST00000484088 S4R3F8 94 aa0.76□□□□□ -2.29
ITGB1-213ENST00000484088 MUC6Q6W4X9 2439 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 SPINK1P00995 79 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 APELAP0DMC3 54 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 LELP1Q5T871 98 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 RHPN1-AS1Q9BWJ2 59 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 Q9Y3F1 56 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 JMJD1CQ15652 2540 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 FLG2Q5D862 2391 aaPredicted RBP0.75□□□□□ -2.29
ITGB1-213ENST00000484088 NAV3Q8IVL0 2385 aa0.75□□□□□ -2.29
ITGB1-213ENST00000484088 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
ITGB1-213ENST00000484088 HTN1P15515 57 aa0.74□□□□□ -2.29
ITGB1-213ENST00000484088 M0QZ58 72 aa0.73□□□□□ -2.29
ITGB1-213ENST00000484088 COL6A6A6NMZ7 2263 aa0.72□□□□□ -2.29
ITGB1-213ENST00000484088 PKDREJQ9NTG1 2253 aa0.72□□□□□ -2.29
ITGB1-213ENST00000484088 DEFB108BQ8NET1 73 aa0.72□□□□□ -2.29
ITGB1-213ENST00000484088 CACNA1HO95180 2353 aa0.72□□□□□ -2.29
ITGB1-213ENST00000484088 ZNF462Q96JM2 2506 aa0.71□□□□□ -2.3
ITGB1-213ENST00000484088 TENM1Q9UKZ4 2725 aa0.71□□□□□ -2.3
ITGB1-213ENST00000484088 A0A0D9SG42 100 aa0.71□□□□□ -2.3
ITGB1-213ENST00000484088 ZDBF2Q9HCK1 2354 aa0.71□□□□□ -2.3
ITGB1-213ENST00000484088 ROS1P08922 2347 aa0.71□□□□□ -2.3
ITGB1-213ENST00000484088 PTPRZ1P23471 2315 aaPredicted RBP0.71□□□□□ -2.3
ITGB1-213ENST00000484088 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
ITGB1-213ENST00000484088 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
ITGB1-213ENST00000484088 DEFB110Q30KQ9 67 aa0.7□□□□□ -2.3
ITGB1-213ENST00000484088 IGF2RP11717 2491 aa0.7□□□□□ -2.3
ITGB1-213ENST00000484088 DEFB1P60022 68 aa0.69□□□□□ -2.3
ITGB1-213ENST00000484088 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
ITGB1-213ENST00000484088 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
ITGB1-213ENST00000484088 KRTAP21-3Q3LHN1 58 aa0.68□□□□□ -2.3
ITGB1-213ENST00000484088 SPTA1P02549 2419 aa0.68□□□□□ -2.3
ITGB1-213ENST00000484088 AKAP6Q13023 2319 aa0.67□□□□□ -2.3
ITGB1-213ENST00000484088 SPTBN1Q01082 2364 aaKnown RBP0.67□□□□□ -2.3
ITGB1-213ENST00000484088 SPART-AS1P0CW21 52 aa0.67□□□□□ -2.3
ITGB1-213ENST00000484088 KRTAP10-4P60372 401 aaPredicted RBP0.67□□□□□ -2.3
ITGB1-213ENST00000484088 SPINK6Q6UWN8 80 aa0.67□□□□□ -2.3
ITGB1-213ENST00000484088 DEFB124Q8NES8 71 aa0.67□□□□□ -2.3
ITGB1-213ENST00000484088 DSPP15924 2871 aaKnown RBP0.67□□□□□ -2.3
ITGB1-213ENST00000484088 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
ITGB1-213ENST00000484088 HELZ2Q9BYK8 2649 aaKnown RBP0.66□□□□□ -2.3
ITGB1-213ENST00000484088 H3BNG1 76 aa0.66□□□□□ -2.3
ITGB1-213ENST00000484088 TNP1P09430 55 aa0.66□□□□□ -2.3
ITGB1-213ENST00000484088 TRANK1O15050 2925 aa0.66□□□□□ -2.3
ITGB1-213ENST00000484088 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
ITGB1-213ENST00000484088 NCOR1O75376 2440 aa0.66□□□□□ -2.3
ITGB1-213ENST00000484088 A0A096LNI7 61 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 C9orf92A6NGG3 77 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 DEFB136Q30KP8 78 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 DEFB135Q30KP9 77 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 PKD1L2Q7Z442 2459 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 REV3LO60673 3130 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 ACACAQ13085 2346 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
ITGB1-213ENST00000484088 CEP250Q9BV73 2442 aa0.64□□□□□ -2.31
ITGB1-213ENST00000484088 HECTD1Q9ULT8 2610 aa0.64□□□□□ -2.31
ITGB1-213ENST00000484088 LINC01556Q5JQF7 62 aa0.64□□□□□ -2.31
ITGB1-213ENST00000484088 ABCA12Q86UK0 2595 aa0.64□□□□□ -2.31
ITGB1-213ENST00000484088 A0A0C4DFX4 3053 aa0.63□□□□□ -2.31
ITGB1-213ENST00000484088 CD52P31358 61 aa0.63□□□□□ -2.31
ITGB1-213ENST00000484088 F8P00451 2351 aa0.63□□□□□ -2.31
ITGB1-213ENST00000484088 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
ITGB1-213ENST00000484088 APC2O95996 2303 aa0.63□□□□□ -2.31
ITGB1-213ENST00000484088 CEP290O15078 2479 aa0.62□□□□□ -2.31
ITGB1-213ENST00000484088 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
ITGB1-213ENST00000484088 A0A096LPF7 62 aa0.62□□□□□ -2.31
ITGB1-213ENST00000484088 RPS29P62273 56 aaKnown RBP0.62□□□□□ -2.31
ITGB1-213ENST00000484088 SRRM2Q9UQ35 2752 aaKnown RBP0.62□□□□□ -2.31
ITGB1-213ENST00000484088 CREBBPQ92793 2442 aa0.62□□□□□ -2.31
ITGB1-213ENST00000484088 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
ITGB1-213ENST00000484088 MAP1BP46821 2468 aaKnown RBP0.61□□□□□ -2.31
ITGB1-213ENST00000484088 NBASA2RRP1 2371 aa0.61□□□□□ -2.31
ITGB1-213ENST00000484088 M0R2T5 61 aa0.61□□□□□ -2.31
ITGB1-213ENST00000484088 DEFB133Q30KQ1 61 aa0.61□□□□□ -2.31
ITGB1-213ENST00000484088 RP1L1Q8IWN7 2480 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-213ENST00000484088 ASH1LQ9NR48 2969 aaKnown RBP0.6□□□□□ -2.31
ITGB1-213ENST00000484088 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
ITGB1-213ENST00000484088 ZNF292O60281 2723 aa0.6□□□□□ -2.31
ITGB1-213ENST00000484088 PRRC2CQ9Y520 2896 aaKnown RBP0.6□□□□□ -2.31
ITGB1-213ENST00000484088 MGAQ8IWI9 3026 aa0.59□□□□□ -2.31
ITGB1-213ENST00000484088 SPTBN4Q9H254 2564 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms