RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
VPS52-218ENST00000482399 TENM2Q9NT68 2774 aa8.15□□□□□ -1.1
VPS52-218ENST00000482399 IGFL1Q6UW32 110 aa8.14□□□□□ -1.11
VPS52-218ENST00000482399 PCOTHQ58A44 107 aa8.14□□□□□ -1.11
VPS52-218ENST00000482399 H3BNG1 76 aa8.13□□□□□ -1.11
VPS52-218ENST00000482399 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
VPS52-218ENST00000482399 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
VPS52-218ENST00000482399 A8MUN3 132 aa8.13□□□□□ -1.11
VPS52-218ENST00000482399 H0Y9P7 68 aa8.12□□□□□ -1.11
VPS52-218ENST00000482399 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
VPS52-218ENST00000482399 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
VPS52-218ENST00000482399 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
VPS52-218ENST00000482399 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
VPS52-218ENST00000482399 hDV103S1A0JD37 113 aa8.1□□□□□ -1.11
VPS52-218ENST00000482399 PRR15LQ9BU68 103 aa8.08□□□□□ -1.12
VPS52-218ENST00000482399 B9D2Q9BPU9 175 aa8.08□□□□□ -1.12
VPS52-218ENST00000482399 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
VPS52-218ENST00000482399 NDUFB1O75438 58 aa8.07□□□□□ -1.12
VPS52-218ENST00000482399 CDK2AP2O75956 126 aa8.05□□□□□ -1.12
VPS52-218ENST00000482399 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
VPS52-218ENST00000482399 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
VPS52-218ENST00000482399 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
VPS52-218ENST00000482399 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
VPS52-218ENST00000482399 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
VPS52-218ENST00000482399 A6NED7 52 aa8.03□□□□□ -1.12
VPS52-218ENST00000482399 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
VPS52-218ENST00000482399 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
VPS52-218ENST00000482399 TNP2Q05952 138 aa8.03□□□□□ -1.12
VPS52-218ENST00000482399 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
VPS52-218ENST00000482399 SPRR1AP35321 89 aa8.01□□□□□ -1.13
VPS52-218ENST00000482399 A8MU10 97 aa8.01□□□□□ -1.13
VPS52-218ENST00000482399 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
VPS52-218ENST00000482399 A0A1B0GW54 56 aa8□□□□□ -1.13
VPS52-218ENST00000482399 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
VPS52-218ENST00000482399 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
VPS52-218ENST00000482399 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.13
VPS52-218ENST00000482399 PRR15Q8IV56 129 aa7.96□□□□□ -1.13
VPS52-218ENST00000482399 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
VPS52-218ENST00000482399 KRTAP1-5Q9BYS1 174 aa7.96□□□□□ -1.14
VPS52-218ENST00000482399 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
VPS52-218ENST00000482399 A8MWP4 228 aa7.93□□□□□ -1.14
VPS52-218ENST00000482399 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
VPS52-218ENST00000482399 CNBPP62633 177 aaKnown RBP7.92□□□□□ -1.14
VPS52-218ENST00000482399 ZCCHC13Q8WW36 166 aaKnown RBP7.92□□□□□ -1.14
VPS52-218ENST00000482399 Q1T7F1 81 aa7.92□□□□□ -1.14
VPS52-218ENST00000482399 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
VPS52-218ENST00000482399 COA5Q86WW8 74 aa7.9□□□□□ -1.14
VPS52-218ENST00000482399 K7EIL1 84 aa7.89□□□□□ -1.15
VPS52-218ENST00000482399 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
VPS52-218ENST00000482399 MOBPQ13875 183 aa7.89□□□□□ -1.15
VPS52-218ENST00000482399 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
VPS52-218ENST00000482399 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
VPS52-218ENST00000482399 Q5VV11 94 aa7.85□□□□□ -1.15
VPS52-218ENST00000482399 LCE6AA0A183 80 aa7.84□□□□□ -1.15
VPS52-218ENST00000482399 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
VPS52-218ENST00000482399 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
VPS52-218ENST00000482399 PANO1I0J062 215 aa7.84□□□□□ -1.15
VPS52-218ENST00000482399 LINC00472Q9H8W2 130 aa7.82□□□□□ -1.16
VPS52-218ENST00000482399 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
VPS52-218ENST00000482399 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
VPS52-218ENST00000482399 MDFIQ99750 246 aa7.8□□□□□ -1.16
VPS52-218ENST00000482399 C9orf163Q8N9P6 203 aa7.79□□□□□ -1.16
VPS52-218ENST00000482399 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
VPS52-218ENST00000482399 H3BPC8 53 aa7.78□□□□□ -1.16
VPS52-218ENST00000482399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.78□□□□□ -1.16
VPS52-218ENST00000482399 TGP01266 2768 aa7.78□□□□□ -1.16
VPS52-218ENST00000482399 CD164Q04900 197 aa7.78□□□□□ -1.16
VPS52-218ENST00000482399 PRR26Q8N8Z3 221 aa7.77□□□□□ -1.17
VPS52-218ENST00000482399 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
VPS52-218ENST00000482399 IGLV8-61A0A075B6I0 122 aa7.76□□□□□ -1.17
VPS52-218ENST00000482399 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
VPS52-218ENST00000482399 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
VPS52-218ENST00000482399 LOC101927531A0A1B0GV80 90 aa7.73□□□□□ -1.17
VPS52-218ENST00000482399 A0A087X002 238 aa7.73□□□□□ -1.17
VPS52-218ENST00000482399 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
VPS52-218ENST00000482399 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
VPS52-218ENST00000482399 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
VPS52-218ENST00000482399 ANK2Q01484 3957 aa7.72□□□□□ -1.17
VPS52-218ENST00000482399 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
VPS52-218ENST00000482399 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
VPS52-218ENST00000482399 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.17
VPS52-218ENST00000482399 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
VPS52-218ENST00000482399 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
VPS52-218ENST00000482399 LCA10Q71F78 164 aa7.7□□□□□ -1.18
VPS52-218ENST00000482399 ZNF706Q9Y5V0 76 aaPredicted RBP7.7□□□□□ -1.18
VPS52-218ENST00000482399 SPRR1BP22528 89 aa7.68□□□□□ -1.18
VPS52-218ENST00000482399 SPINK7P58062 85 aa7.68□□□□□ -1.18
VPS52-218ENST00000482399 RTL8CO15255 209 aa7.67□□□□□ -1.18
VPS52-218ENST00000482399 DNAH10Q8IVF4 4471 aa7.67□□□□□ -1.18
VPS52-218ENST00000482399 HRES1P13985 223 aa7.67□□□□□ -1.18
VPS52-218ENST00000482399 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
VPS52-218ENST00000482399 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
VPS52-218ENST00000482399 SPINK1P00995 79 aa7.64□□□□□ -1.19
VPS52-218ENST00000482399 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
VPS52-218ENST00000482399 IGKV2D-30A0A075B6S6 120 aa7.63□□□□□ -1.19
VPS52-218ENST00000482399 IGKV2-30P06310 120 aa7.63□□□□□ -1.19
VPS52-218ENST00000482399 Q75L30 129 aa7.63□□□□□ -1.19
VPS52-218ENST00000482399 LY6G6CO95867 125 aa7.62□□□□□ -1.19
VPS52-218ENST00000482399 A0A087WTM6 91 aa7.62□□□□□ -1.19
VPS52-218ENST00000482399 H3BS24 57 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms