RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 UBE2AP49459 152 aa9.8□□□□□ -0.84
RXRA-202ENST00000481739 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
RXRA-202ENST00000481739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
RXRA-202ENST00000481739 PKD1P98161 4303 aa9.8□□□□□ -0.84
RXRA-202ENST00000481739 PANO1I0J062 215 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 SPRR1BP22528 89 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 HAMPP81172 84 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 IGLV8-61A0A075B6I0 122 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 KRTAP11-1Q8IUC1 163 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 Q8NBF4 154 aa9.79□□□□□ -0.84
RXRA-202ENST00000481739 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
RXRA-202ENST00000481739 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
RXRA-202ENST00000481739 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.84
RXRA-202ENST00000481739 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
RXRA-202ENST00000481739 NREPQ16612 68 aa9.76□□□□□ -0.85
RXRA-202ENST00000481739 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
RXRA-202ENST00000481739 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
RXRA-202ENST00000481739 A0A087WVE0 104 aa9.74□□□□□ -0.85
RXRA-202ENST00000481739 CRYGAP11844 174 aa9.72□□□□□ -0.85
RXRA-202ENST00000481739 UQCRQO14949 82 aa9.7□□□□□ -0.86
RXRA-202ENST00000481739 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
RXRA-202ENST00000481739 IGFL1Q6UW32 110 aa9.69□□□□□ -0.86
RXRA-202ENST00000481739 BPY2O14599 106 aa9.68□□□□□ -0.86
RXRA-202ENST00000481739 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
RXRA-202ENST00000481739 ZNF706Q9Y5V0 76 aaPredicted RBP9.68□□□□□ -0.86
RXRA-202ENST00000481739 CCDC179H3BU77 68 aa9.68□□□□□ -0.86
RXRA-202ENST00000481739 COX7CP15954 63 aa9.68□□□□□ -0.86
RXRA-202ENST00000481739 SERP2Q8N6R1 65 aa9.67□□□□□ -0.86
RXRA-202ENST00000481739 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
RXRA-202ENST00000481739 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
RXRA-202ENST00000481739 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
RXRA-202ENST00000481739 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
RXRA-202ENST00000481739 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
RXRA-202ENST00000481739 RYR3Q15413 4870 aa9.63□□□□□ -0.87
RXRA-202ENST00000481739 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
RXRA-202ENST00000481739 SCXQ7RTU7 201 aa9.63□□□□□ -0.87
RXRA-202ENST00000481739 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
RXRA-202ENST00000481739 ZNF861PO60384 105 aa9.62□□□□□ -0.87
RXRA-202ENST00000481739 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
RXRA-202ENST00000481739 Q6ZSA8 131 aa9.61□□□□□ -0.87
RXRA-202ENST00000481739 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
RXRA-202ENST00000481739 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
RXRA-202ENST00000481739 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
RXRA-202ENST00000481739 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
RXRA-202ENST00000481739 A0A087WSZ3 146 aa9.56□□□□□ -0.88
RXRA-202ENST00000481739 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
RXRA-202ENST00000481739 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
RXRA-202ENST00000481739 Q8N9L7 120 aa9.53□□□□□ -0.88
RXRA-202ENST00000481739 A0A0G2JQZ4 141 aa9.52□□□□□ -0.89
RXRA-202ENST00000481739 DSCR10P59022 87 aa9.52□□□□□ -0.89
RXRA-202ENST00000481739 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
RXRA-202ENST00000481739 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
RXRA-202ENST00000481739 J3KT08 172 aa9.47□□□□□ -0.89
RXRA-202ENST00000481739 K7EQZ3 153 aa9.47□□□□□ -0.89
RXRA-202ENST00000481739 SVIPQ8NHG7 77 aa9.47□□□□□ -0.89
RXRA-202ENST00000481739 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
RXRA-202ENST00000481739 LINC00472Q9H8W2 130 aa9.45□□□□□ -0.9
RXRA-202ENST00000481739 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
RXRA-202ENST00000481739 MOBPQ13875 183 aa9.43□□□□□ -0.9
RXRA-202ENST00000481739 HCG22E2RYF7 251 aa9.42□□□□□ -0.9
RXRA-202ENST00000481739 OCR1Q9BZK8 76 aa9.42□□□□□ -0.9
RXRA-202ENST00000481739 A8MWP4 228 aa9.41□□□□□ -0.9
RXRA-202ENST00000481739 SMR3BP02814 79 aaPredicted RBP9.41□□□□□ -0.9
RXRA-202ENST00000481739 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
RXRA-202ENST00000481739 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
RXRA-202ENST00000481739 TMEM258P61165 79 aa9.4□□□□□ -0.9
RXRA-202ENST00000481739 SSBP3-AS1Q7Z2R9 100 aa9.39□□□□□ -0.91
RXRA-202ENST00000481739 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
RXRA-202ENST00000481739 CD164Q04900 197 aa9.38□□□□□ -0.91
RXRA-202ENST00000481739 DEFB116Q30KQ4 102 aa9.38□□□□□ -0.91
RXRA-202ENST00000481739 VPS13BQ7Z7G8 4022 aa9.37□□□□□ -0.91
RXRA-202ENST00000481739 NDUFB1O75438 58 aa9.37□□□□□ -0.91
RXRA-202ENST00000481739 NDUFC1O43677 76 aa9.35□□□□□ -0.91
RXRA-202ENST00000481739 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
RXRA-202ENST00000481739 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
RXRA-202ENST00000481739 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
RXRA-202ENST00000481739 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
RXRA-202ENST00000481739 Q96NJ1 140 aa9.33□□□□□ -0.92
RXRA-202ENST00000481739 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
RXRA-202ENST00000481739 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
RXRA-202ENST00000481739 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
RXRA-202ENST00000481739 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
RXRA-202ENST00000481739 FAT1Q14517 4588 aa9.29□□□□□ -0.92
RXRA-202ENST00000481739 H7BZZ5 65 aa9.28□□□□□ -0.92
RXRA-202ENST00000481739 C5orf47Q569G3 176 aa9.28□□□□□ -0.92
RXRA-202ENST00000481739 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
RXRA-202ENST00000481739 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
RXRA-202ENST00000481739 A0A0U1RQV1 116 aa9.27□□□□□ -0.93
RXRA-202ENST00000481739 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
RXRA-202ENST00000481739 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
RXRA-202ENST00000481739 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
RXRA-202ENST00000481739 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
RXRA-202ENST00000481739 HSPG2P98160 4391 aa9.24□□□□□ -0.93
RXRA-202ENST00000481739 Q5XG85 94 aa9.24□□□□□ -0.93
RXRA-202ENST00000481739 SPINK6Q6UWN8 80 aa9.24□□□□□ -0.93
RXRA-202ENST00000481739 RYR1P21817 5038 aa9.23□□□□□ -0.93
RXRA-202ENST00000481739 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
RXRA-202ENST00000481739 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
RXRA-202ENST00000481739 RPS28P62857 69 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms