RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SPANXN1Q5VSR9 72 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 K7EP34 96 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 IGHV3-33P01772 117 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 FXYD4P59646 89 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 SERF2P84101 59 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 PMCHL2Q9BQD1 86 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 ARL2-SNX15V9GYD0 113 aa1.59□□□□□ -2.16
SMC6-208ENST00000481708 TRAV12-3A0A0B4J271 114 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 SMR3BP02814 79 aaPredicted RBP1.58□□□□□ -2.16
SMC6-208ENST00000481708 HTN3P15516 51 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 PRR9Q5T870 116 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 HIGD1BQ9P298 99 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 A0A0J9YY99 117 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 UMAD1C9J7I0 102 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 Q5VSD8 79 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 COPS9Q8WXC6 57 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 IGKV3D-7A0A0C4DH55 119 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 IGKV3OR2-268A0A0C4DH90 116 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 KANTRA0A1W2PQU2 76 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 ASIPP42127 132 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 PLGLAQ15195 96 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 DEFB135Q30KP9 77 aa1.58□□□□□ -2.16
SMC6-208ENST00000481708 IGLV4-60A0A075B6I1 120 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 CDC42SE1Q9NRR8 79 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 PSENENQ9NZ42 101 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 LOC101927531A0A1B0GV80 90 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 SSSCA1O60232 199 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 WT1-ASQ06250 92 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 TRGV9Q99603 122 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 TRBV7-7A0A0K0K1E9 115 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 SPRR5A0A1B0GTR4 108 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 F8W1H4 67 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 DEFB4AO15263 64 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 SPINK4O60575 86 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 RPL7L1Q6DKI1 246 aaKnown RBP1.57□□□□□ -2.16
SMC6-208ENST00000481708 LEAP2Q969E1 77 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 TXNDC17Q9BRA2 123 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 PLAC8Q9NZF1 115 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 C22orf24Q9Y442 160 aa1.57□□□□□ -2.16
SMC6-208ENST00000481708 FXYD6-FXYD2A0A087WZ82 144 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 TRAV13-2A0A0B4J235 113 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 H7BZZ5 65 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 KRTAP12-2P59991 146 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 SFTA2Q6UW10 78 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 PPDPFLQ8WWR9 84 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 MGST2Q99735 147 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 A0A087WTM6 91 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 TRAV22A0A0B4J277 110 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 KRTAP9-6A8MVA2 160 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 G3V318 75 aa1.56□□□□□ -2.16
SMC6-208ENST00000481708 SEC11AP67812 179 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 HAMPP81172 84 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 FAM167A-AS1Q96KT0 104 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 CTXND1A0A1B0GTU2 59 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 IGFL1Q6UW32 110 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 MRPL36Q9P0J6 103 aaKnown RBP1.55□□□□□ -2.16
SMC6-208ENST00000481708 IGKV2-28A0A075B6P5 120 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 IGKV2D-28P01615 120 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 PDE6GP18545 87 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 LINC01556Q5JQF7 62 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 CYP2G1PQ6ZSU1 146 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 WFDC10AQ9H1F0 79 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 MANBALQ9NQG1 85 aa1.55□□□□□ -2.16
SMC6-208ENST00000481708 A0A087WWC5 75 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 CEBPZOSA8MTT3 80 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 H3BRN7 92 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 IAPPP10997 89 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 RPS29P62273 56 aaKnown RBP1.54□□□□□ -2.16
SMC6-208ENST00000481708 FXYD3Q14802 87 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 FSIP2Q5CZC0 6907 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 IGKV1-17P01599 117 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 IGLC2P0DOY2 106 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 PEA15Q15121 130 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 TRBV6-4A0A1B0GX49 114 aa1.54□□□□□ -2.16
SMC6-208ENST00000481708 WFDC2Q14508 124 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 OR10AG1Q8NH19 301 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 MT1HP80294 61 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 ELOBQ15370 118 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 C10orf55Q5SWW7 151 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 CMTM2Q8TAZ6 248 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 TMEM167BQ9NRX6 74 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 ORMDL1Q9P0S3 153 aa1.53□□□□□ -2.16
SMC6-208ENST00000481708 A0A096LPF7 62 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 TRBV10-3A0A0K0K1G6 114 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 GCHFRP30047 84 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP5-4Q6L8H1 288 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 KRTAP13-1Q8IUC0 172 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 C20orf197Q8N268 126 aa1.53□□□□□ -2.17
SMC6-208ENST00000481708 ZNF625Q96I27 306 aaPredicted RBP1.53□□□□□ -2.17
SMC6-208ENST00000481708 IGHV3-30P01768 117 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 IGHV3-30-5P0DP03 117 aa1.52□□□□□ -2.17
SMC6-208ENST00000481708 DEFB131BA0A096LNP1 70 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms