RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PPDPFLQ8WWR9 84 aa6.54□□□□□ -1.36
SQSTM1-207ENST00000481335 HIST1H2BLQ99880 126 aa6.54□□□□□ -1.36
SQSTM1-207ENST00000481335 hADV29S1A0JD25 119 aa6.53□□□□□ -1.36
SQSTM1-207ENST00000481335 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
SQSTM1-207ENST00000481335 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
SQSTM1-207ENST00000481335 BVES-AS1Q5T3Y7 98 aa6.52□□□□□ -1.37
SQSTM1-207ENST00000481335 Q6ZQY7 126 aa6.52□□□□□ -1.37
SQSTM1-207ENST00000481335 CLEC2BQ92478 149 aa6.52□□□□□ -1.37
SQSTM1-207ENST00000481335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.51□□□□□ -1.37
SQSTM1-207ENST00000481335 A0A0G2JQZ4 141 aa6.49□□□□□ -1.37
SQSTM1-207ENST00000481335 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
SQSTM1-207ENST00000481335 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
SQSTM1-207ENST00000481335 S100A6P06703 90 aa6.49□□□□□ -1.37
SQSTM1-207ENST00000481335 MT1HP80294 61 aa6.49□□□□□ -1.37
SQSTM1-207ENST00000481335 A6NJY4 79 aa6.48□□□□□ -1.37
SQSTM1-207ENST00000481335 OCIAD2Q56VL3 154 aa6.47□□□□□ -1.37
SQSTM1-207ENST00000481335 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
SQSTM1-207ENST00000481335 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
SQSTM1-207ENST00000481335 DLEU1O43261 78 aa6.46□□□□□ -1.38
SQSTM1-207ENST00000481335 S100A1P23297 94 aa6.46□□□□□ -1.38
SQSTM1-207ENST00000481335 SNCGO76070 127 aa6.45□□□□□ -1.38
SQSTM1-207ENST00000481335 COX8AP10176 69 aa6.45□□□□□ -1.38
SQSTM1-207ENST00000481335 SNHG12Q9BXW3 62 aa6.44□□□□□ -1.38
SQSTM1-207ENST00000481335 Q6Q795 121 aa6.43□□□□□ -1.38
SQSTM1-207ENST00000481335 SS18L2Q9UHA2 77 aa6.43□□□□□ -1.38
SQSTM1-207ENST00000481335 GHRHP01286 108 aa6.42□□□□□ -1.38
SQSTM1-207ENST00000481335 Q75L30 129 aa6.42□□□□□ -1.38
SQSTM1-207ENST00000481335 C12orf57Q99622 126 aa6.42□□□□□ -1.38
SQSTM1-207ENST00000481335 H0YGX0 51 aa6.41□□□□□ -1.38
SQSTM1-207ENST00000481335 COX6B2Q6YFQ2 88 aa6.41□□□□□ -1.38
SQSTM1-207ENST00000481335 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
SQSTM1-207ENST00000481335 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
SQSTM1-207ENST00000481335 LST1O00453 97 aa6.4□□□□□ -1.38
SQSTM1-207ENST00000481335 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.38
SQSTM1-207ENST00000481335 RAB37Q96AX2 223 aa6.4□□□□□ -1.38
SQSTM1-207ENST00000481335 A0A1B0GX51 115 aa6.39□□□□□ -1.39
SQSTM1-207ENST00000481335 CFC1P0CG37 223 aa6.39□□□□□ -1.39
SQSTM1-207ENST00000481335 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
SQSTM1-207ENST00000481335 ATP11AUNQ6ZP68 121 aa6.39□□□□□ -1.39
SQSTM1-207ENST00000481335 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
SQSTM1-207ENST00000481335 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
SQSTM1-207ENST00000481335 H3BUT2 72 aa6.37□□□□□ -1.39
SQSTM1-207ENST00000481335 OBSCN-AS1Q96MR7 158 aa6.37□□□□□ -1.39
SQSTM1-207ENST00000481335 M0R2T5 61 aa6.36□□□□□ -1.39
SQSTM1-207ENST00000481335 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
SQSTM1-207ENST00000481335 NDUFV3P56181 108 aaKnown RBP6.35□□□□□ -1.39
SQSTM1-207ENST00000481335 SPATA45Q537H7 98 aa6.34□□□□□ -1.39
SQSTM1-207ENST00000481335 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
SQSTM1-207ENST00000481335 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
SQSTM1-207ENST00000481335 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
SQSTM1-207ENST00000481335 PAM16Q9Y3D7 125 aa6.33□□□□□ -1.4
SQSTM1-207ENST00000481335 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
SQSTM1-207ENST00000481335 CEND1Q8N111 149 aa6.32□□□□□ -1.4
SQSTM1-207ENST00000481335 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
SQSTM1-207ENST00000481335 Q96NJ1 140 aa6.32□□□□□ -1.4
SQSTM1-207ENST00000481335 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
SQSTM1-207ENST00000481335 A0A087WSZ3 146 aa6.31□□□□□ -1.4
SQSTM1-207ENST00000481335 H3BMG7 143 aa6.31□□□□□ -1.4
SQSTM1-207ENST00000481335 H3BQ85 93 aa6.31□□□□□ -1.4
SQSTM1-207ENST00000481335 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
SQSTM1-207ENST00000481335 A8MUU9 505 aa6.3□□□□□ -1.4
SQSTM1-207ENST00000481335 FABP2P12104 132 aa6.28□□□□□ -1.4
SQSTM1-207ENST00000481335 DNAL4O96015 105 aa6.27□□□□□ -1.41
SQSTM1-207ENST00000481335 TRBV7-4A0A0J9YYF1 115 aa6.26□□□□□ -1.41
SQSTM1-207ENST00000481335 TRIAP1O43715 76 aa6.26□□□□□ -1.41
SQSTM1-207ENST00000481335 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
SQSTM1-207ENST00000481335 TRBV20-1A0A075B6N2 111 aa6.25□□□□□ -1.41
SQSTM1-207ENST00000481335 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
SQSTM1-207ENST00000481335 FXYD2P54710 66 aa6.25□□□□□ -1.41
SQSTM1-207ENST00000481335 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
SQSTM1-207ENST00000481335 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
SQSTM1-207ENST00000481335 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
SQSTM1-207ENST00000481335 COX6CP09669 75 aa6.23□□□□□ -1.41
SQSTM1-207ENST00000481335 HSD52Q0P140 79 aa6.23□□□□□ -1.41
SQSTM1-207ENST00000481335 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
SQSTM1-207ENST00000481335 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
SQSTM1-207ENST00000481335 LINC00313P59037 77 aa6.21□□□□□ -1.42
SQSTM1-207ENST00000481335 PSMB2P49721 201 aa6.2□□□□□ -1.42
SQSTM1-207ENST00000481335 DSCR10P59022 87 aa6.2□□□□□ -1.42
SQSTM1-207ENST00000481335 IGKV4-1P06312 121 aa6.19□□□□□ -1.42
SQSTM1-207ENST00000481335 UBE2V1Q13404 147 aa6.19□□□□□ -1.42
SQSTM1-207ENST00000481335 TRACP01848 142 aa6.18□□□□□ -1.42
SQSTM1-207ENST00000481335 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
SQSTM1-207ENST00000481335 CCKP06307 115 aa6.17□□□□□ -1.42
SQSTM1-207ENST00000481335 PYY3Q5JQD4 70 aa6.17□□□□□ -1.42
SQSTM1-207ENST00000481335 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
SQSTM1-207ENST00000481335 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
SQSTM1-207ENST00000481335 K7ERJ3 54 aa6.15□□□□□ -1.42
SQSTM1-207ENST00000481335 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
SQSTM1-207ENST00000481335 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
SQSTM1-207ENST00000481335 RBM12B-AS1Q9P1G2 102 aa6.13□□□□□ -1.43
SQSTM1-207ENST00000481335 A0A1B0GV72 72 aa6.12□□□□□ -1.43
SQSTM1-207ENST00000481335 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
SQSTM1-207ENST00000481335 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
SQSTM1-207ENST00000481335 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
SQSTM1-207ENST00000481335 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
SQSTM1-207ENST00000481335 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
SQSTM1-207ENST00000481335 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
SQSTM1-207ENST00000481335 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
SQSTM1-207ENST00000481335 J3KT08 172 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms