RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C16orf90A8MZG2 172 aa6.79□□□□□ -1.32
VPS52-217ENST00000478934 EPM2AB3EWF7 344 aa6.79□□□□□ -1.32
VPS52-217ENST00000478934 DSCR10P59022 87 aa6.79□□□□□ -1.32
VPS52-217ENST00000478934 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
VPS52-217ENST00000478934 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
VPS52-217ENST00000478934 PANO1I0J062 215 aa6.78□□□□□ -1.32
VPS52-217ENST00000478934 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
VPS52-217ENST00000478934 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
VPS52-217ENST00000478934 IGFL1Q6UW32 110 aa6.77□□□□□ -1.33
VPS52-217ENST00000478934 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
VPS52-217ENST00000478934 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
VPS52-217ENST00000478934 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
VPS52-217ENST00000478934 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
VPS52-217ENST00000478934 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
VPS52-217ENST00000478934 SPRR4Q96PI1 79 aa6.75□□□□□ -1.33
VPS52-217ENST00000478934 A0A087WSZ3 146 aa6.75□□□□□ -1.33
VPS52-217ENST00000478934 WFDC13Q8IUB5 93 aa6.73□□□□□ -1.33
VPS52-217ENST00000478934 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
VPS52-217ENST00000478934 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
VPS52-217ENST00000478934 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
VPS52-217ENST00000478934 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
VPS52-217ENST00000478934 NDUFC1O43677 76 aa6.72□□□□□ -1.33
VPS52-217ENST00000478934 PRR4Q16378 134 aa6.72□□□□□ -1.33
VPS52-217ENST00000478934 UBE2AP49459 152 aa6.7□□□□□ -1.34
VPS52-217ENST00000478934 NBDYA0A0U1RRE5 68 aa6.7□□□□□ -1.34
VPS52-217ENST00000478934 FRAS1Q86XX4 4008 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 C9orf163Q8N9P6 203 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 TGP01266 2768 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 VPS13DQ5THJ4 4388 aa6.69□□□□□ -1.34
VPS52-217ENST00000478934 LINC00336Q6ZUF6 198 aa6.68□□□□□ -1.34
VPS52-217ENST00000478934 HCG22E2RYF7 251 aa6.68□□□□□ -1.34
VPS52-217ENST00000478934 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
VPS52-217ENST00000478934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
VPS52-217ENST00000478934 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
VPS52-217ENST00000478934 DNHD1Q96M86 4753 aa6.66□□□□□ -1.34
VPS52-217ENST00000478934 A0A1B0GW54 56 aa6.65□□□□□ -1.34
VPS52-217ENST00000478934 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
VPS52-217ENST00000478934 FBN3Q75N90 2809 aa6.65□□□□□ -1.35
VPS52-217ENST00000478934 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
VPS52-217ENST00000478934 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
VPS52-217ENST00000478934 LCE6AA0A183 80 aa6.62□□□□□ -1.35
VPS52-217ENST00000478934 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
VPS52-217ENST00000478934 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
VPS52-217ENST00000478934 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
VPS52-217ENST00000478934 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
VPS52-217ENST00000478934 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
VPS52-217ENST00000478934 NUPR2A6NF83 97 aa6.6□□□□□ -1.35
VPS52-217ENST00000478934 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
VPS52-217ENST00000478934 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
VPS52-217ENST00000478934 A0A087WTM6 91 aa6.59□□□□□ -1.36
VPS52-217ENST00000478934 H0Y9J4 135 aa6.59□□□□□ -1.36
VPS52-217ENST00000478934 SPRR1BP22528 89 aa6.59□□□□□ -1.36
VPS52-217ENST00000478934 SPACA4Q8TDM5 124 aa6.59□□□□□ -1.36
VPS52-217ENST00000478934 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.36
VPS52-217ENST00000478934 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
VPS52-217ENST00000478934 CASC2Q6XLA1 102 aa6.58□□□□□ -1.36
VPS52-217ENST00000478934 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
VPS52-217ENST00000478934 DNAH6Q9C0G6 4158 aa6.57□□□□□ -1.36
VPS52-217ENST00000478934 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
VPS52-217ENST00000478934 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
VPS52-217ENST00000478934 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
VPS52-217ENST00000478934 RTL8CO15255 209 aa6.55□□□□□ -1.36
VPS52-217ENST00000478934 H0Y9P7 68 aa6.54□□□□□ -1.36
VPS52-217ENST00000478934 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
VPS52-217ENST00000478934 A8MWP4 228 aa6.54□□□□□ -1.36
VPS52-217ENST00000478934 MP68P56378 58 aa6.53□□□□□ -1.36
VPS52-217ENST00000478934 PSPHP1O15172 72 aa6.53□□□□□ -1.36
VPS52-217ENST00000478934 TRAV22A0A0B4J277 110 aa6.52□□□□□ -1.37
VPS52-217ENST00000478934 PKIGQ9Y2B9 76 aa6.52□□□□□ -1.37
VPS52-217ENST00000478934 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
VPS52-217ENST00000478934 MOBPQ13875 183 aa6.51□□□□□ -1.37
VPS52-217ENST00000478934 Q6ZR54 194 aa6.5□□□□□ -1.37
VPS52-217ENST00000478934 Q96NJ1 140 aa6.5□□□□□ -1.37
VPS52-217ENST00000478934 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
VPS52-217ENST00000478934 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
VPS52-217ENST00000478934 IGLV5-52A0A0A0MRZ9 124 aa6.48□□□□□ -1.37
VPS52-217ENST00000478934 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
VPS52-217ENST00000478934 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
VPS52-217ENST00000478934 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
VPS52-217ENST00000478934 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
VPS52-217ENST00000478934 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.37
VPS52-217ENST00000478934 LY6G6CO95867 125 aa6.46□□□□□ -1.37
VPS52-217ENST00000478934 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 A0A087X002 238 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 NDUFS5O43920 106 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 NDUFB1O75438 58 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.38
VPS52-217ENST00000478934 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
VPS52-217ENST00000478934 ZNF861PO60384 105 aa6.44□□□□□ -1.38
VPS52-217ENST00000478934 C1orf134Q5TEV5 83 aa6.44□□□□□ -1.38
VPS52-217ENST00000478934 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
VPS52-217ENST00000478934 A8MUN3 132 aa6.43□□□□□ -1.38
VPS52-217ENST00000478934 A8MU10 97 aa6.43□□□□□ -1.38
VPS52-217ENST00000478934 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
VPS52-217ENST00000478934 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms