RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TMEM238LA0A1B0GVL6 79 aa12.51□□□□□ -0.41
SF1-214ENST00000477596 A6NJY4 79 aa12.51□□□□□ -0.41
SF1-214ENST00000477596 HSD52Q0P140 79 aa12.51□□□□□ -0.41
SF1-214ENST00000477596 FAM218AQ96MZ4 157 aa12.5□□□□□ -0.41
SF1-214ENST00000477596 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.49□□□□□ -0.41
SF1-214ENST00000477596 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
SF1-214ENST00000477596 LIMD2Q9BT23 127 aa12.48□□□□□ -0.41
SF1-214ENST00000477596 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
SF1-214ENST00000477596 K7ERJ3 54 aa12.47□□□□□ -0.41
SF1-214ENST00000477596 CD164Q04900 197 aa12.47□□□□□ -0.41
SF1-214ENST00000477596 MUC2Q02817 5179 aa12.46□□□□□ -0.41
SF1-214ENST00000477596 F8WEM9 126 aa12.45□□□□□ -0.42
SF1-214ENST00000477596 H0YGX0 51 aa12.42□□□□□ -0.42
SF1-214ENST00000477596 TRIAP1O43715 76 aa12.42□□□□□ -0.42
SF1-214ENST00000477596 IGLV8-61A0A075B6I0 122 aa12.39□□□□□ -0.43
SF1-214ENST00000477596 IGFL1Q6UW32 110 aa12.38□□□□□ -0.43
SF1-214ENST00000477596 PPDPFLQ8WWR9 84 aa12.38□□□□□ -0.43
SF1-214ENST00000477596 OCIAD2Q56VL3 154 aa12.37□□□□□ -0.43
SF1-214ENST00000477596 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
SF1-214ENST00000477596 SNHG12Q9BXW3 62 aa12.37□□□□□ -0.43
SF1-214ENST00000477596 H3BUT2 72 aa12.36□□□□□ -0.43
SF1-214ENST00000477596 Q5XG85 94 aa12.36□□□□□ -0.43
SF1-214ENST00000477596 Q6JHZ5 121 aa12.35□□□□□ -0.43
SF1-214ENST00000477596 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
SF1-214ENST00000477596 SNCGO76070 127 aa12.32□□□□□ -0.44
SF1-214ENST00000477596 PSMB2P49721 201 aa12.32□□□□□ -0.44
SF1-214ENST00000477596 A0A1B0GX51 115 aa12.3□□□□□ -0.44
SF1-214ENST00000477596 XP32Q5T750 250 aa12.3□□□□□ -0.44
SF1-214ENST00000477596 SMIM6P0DI80 62 aa12.29□□□□□ -0.44
SF1-214ENST00000477596 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
SF1-214ENST00000477596 C9orf92A6NGG3 77 aa12.28□□□□□ -0.44
SF1-214ENST00000477596 NDUFV3P56181 108 aaKnown RBP12.28□□□□□ -0.44
SF1-214ENST00000477596 TCL1BO95988 128 aa12.25□□□□□ -0.45
SF1-214ENST00000477596 FABP2P12104 132 aa12.25□□□□□ -0.45
SF1-214ENST00000477596 ASB16-AS1Q495Z4 193 aa12.25□□□□□ -0.45
SF1-214ENST00000477596 DNAL4O96015 105 aa12.21□□□□□ -0.45
SF1-214ENST00000477596 COX6CP09669 75 aa12.21□□□□□ -0.45
SF1-214ENST00000477596 H3BMG7 143 aa12.2□□□□□ -0.46
SF1-214ENST00000477596 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
SF1-214ENST00000477596 SEC61BP60468 96 aaKnown RBP12.19□□□□□ -0.46
SF1-214ENST00000477596 KRTAP4-1Q9BYQ7 146 aa12.19□□□□□ -0.46
SF1-214ENST00000477596 ORMDL1Q9P0S3 153 aa12.19□□□□□ -0.46
SF1-214ENST00000477596 FAT4Q6V0I7 4981 aa12.18□□□□□ -0.46
SF1-214ENST00000477596 A0A1B0GV72 72 aa12.18□□□□□ -0.46
SF1-214ENST00000477596 GHRHP01286 108 aa12.16□□□□□ -0.46
SF1-214ENST00000477596 M0R143 59 aa12.15□□□□□ -0.46
SF1-214ENST00000477596 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
SF1-214ENST00000477596 Q6Q795 121 aa12.14□□□□□ -0.47
SF1-214ENST00000477596 NAA38Q9BRA0 125 aaKnown RBP12.13□□□□□ -0.47
SF1-214ENST00000477596 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
SF1-214ENST00000477596 LST1O00453 97 aa12.12□□□□□ -0.47
SF1-214ENST00000477596 TEN1Q86WV5 123 aa12.12□□□□□ -0.47
SF1-214ENST00000477596 A0A1W2PNM2 257 aa12.1□□□□□ -0.47
SF1-214ENST00000477596 TRACP01848 142 aa12.1□□□□□ -0.47
SF1-214ENST00000477596 A0A087WSZ3 146 aa12.09□□□□□ -0.47
SF1-214ENST00000477596 TSTD3H0UI37 97 aa12.08□□□□□ -0.48
SF1-214ENST00000477596 TMEM256-PLSCR3K7ERE1 68 aa12.08□□□□□ -0.48
SF1-214ENST00000477596 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
SF1-214ENST00000477596 H3BQ85 93 aa12.06□□□□□ -0.48
SF1-214ENST00000477596 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
SF1-214ENST00000477596 ANKRD29Q8N6D5 301 aa12.04□□□□□ -0.48
SF1-214ENST00000477596 UBE2V1Q13404 147 aa12.03□□□□□ -0.48
SF1-214ENST00000477596 BATFQ16520 125 aa12.02□□□□□ -0.49
SF1-214ENST00000477596 Q96NJ1 140 aa12.01□□□□□ -0.49
SF1-214ENST00000477596 RPL37P61927 97 aaKnown RBP12□□□□□ -0.49
SF1-214ENST00000477596 OBSCN-AS1Q96MR7 158 aa11.98□□□□□ -0.49
SF1-214ENST00000477596 TRBV7-4A0A0J9YYF1 115 aa11.97□□□□□ -0.49
SF1-214ENST00000477596 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
SF1-214ENST00000477596 LCE2AQ5TA79 106 aaPredicted RBP11.97□□□□□ -0.49
SF1-214ENST00000477596 CCKP06307 115 aa11.96□□□□□ -0.49
SF1-214ENST00000477596 ATXN8Q156A1 80 aa11.95□□□□□ -0.5
SF1-214ENST00000477596 RBM3P98179 157 aaKnown RBP11.91□□□□□ -0.5
SF1-214ENST00000477596 VPS25Q9BRG1 176 aa11.91□□□□□ -0.5
SF1-214ENST00000477596 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
SF1-214ENST00000477596 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
SF1-214ENST00000477596 DEFB116Q30KQ4 102 aa11.86□□□□□ -0.51
SF1-214ENST00000477596 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
SF1-214ENST00000477596 LYRM7Q5U5X0 104 aa11.85□□□□□ -0.51
SF1-214ENST00000477596 IGKV4-1P06312 121 aa11.84□□□□□ -0.51
SF1-214ENST00000477596 DSCR10P59022 87 aa11.84□□□□□ -0.51
SF1-214ENST00000477596 KRTAP19-2Q3LHN2 52 aa11.83□□□□□ -0.52
SF1-214ENST00000477596 Q75L30 129 aa11.83□□□□□ -0.52
SF1-214ENST00000477596 LINC00472Q9H8W2 130 aa11.83□□□□□ -0.52
SF1-214ENST00000477596 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
SF1-214ENST00000477596 C9JAW5 83 aa11.82□□□□□ -0.52
SF1-214ENST00000477596 TRBV20-1A0A075B6N2 111 aa11.8□□□□□ -0.52
SF1-214ENST00000477596 LCE2CQ5TA81 110 aa11.8□□□□□ -0.52
SF1-214ENST00000477596 A0A1W2PPM0 123 aa11.77□□□□□ -0.53
SF1-214ENST00000477596 Q6ZQT0 140 aa11.77□□□□□ -0.53
SF1-214ENST00000477596 C20orf166-AS1Q96NR2 134 aa11.77□□□□□ -0.53
SF1-214ENST00000477596 JMJD7-PLA2G4BH0Y9G9 81 aa11.76□□□□□ -0.53
SF1-214ENST00000477596 A8MUU9 505 aa11.75□□□□□ -0.53
SF1-214ENST00000477596 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
SF1-214ENST00000477596 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
SF1-214ENST00000477596 C14orf132Q9NPU4 83 aa11.75□□□□□ -0.53
SF1-214ENST00000477596 LOC110117498A0A087WWA1 95 aa11.74□□□□□ -0.53
SF1-214ENST00000477596 ATP11AUNQ6ZP68 121 aa11.74□□□□□ -0.53
SF1-214ENST00000477596 KRTAP16-1A8MUX0 517 aa11.71□□□□□ -0.53
SF1-214ENST00000477596 LINC00313P59037 77 aa11.71□□□□□ -0.53
SF1-214ENST00000477596 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms