RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 UBE2AP49459 152 aa4.94□□□□□ -1.62
HDAC6-221ENST00000477561 LRP2P98164 4655 aa4.94□□□□□ -1.62
HDAC6-221ENST00000477561 H3BQ85 93 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 PRLHP81277 87 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 ANAPC11Q9NYG5 84 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
HDAC6-221ENST00000477561 B5MCH6 92 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 OCIAD2Q56VL3 154 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-221ENST00000477561 Q6ZRX8 168 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 FAM19A1Q7Z5A9 133 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 ORMDL1Q9P0S3 153 aa4.92□□□□□ -1.62
HDAC6-221ENST00000477561 LPAP08519 4548 aa4.91□□□□□ -1.62
HDAC6-221ENST00000477561 A0A087X002 238 aa4.91□□□□□ -1.62
HDAC6-221ENST00000477561 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
HDAC6-221ENST00000477561 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
HDAC6-221ENST00000477561 MTURNQ8N3F0 131 aa4.91□□□□□ -1.62
HDAC6-221ENST00000477561 H3BS24 57 aa4.9□□□□□ -1.63
HDAC6-221ENST00000477561 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
HDAC6-221ENST00000477561 CRYGAP11844 174 aa4.89□□□□□ -1.63
HDAC6-221ENST00000477561 Q6ZQY7 126 aa4.89□□□□□ -1.63
HDAC6-221ENST00000477561 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 ETDBQ3ZM63 59 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 PPDPFLQ8WWR9 84 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
HDAC6-221ENST00000477561 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
HDAC6-221ENST00000477561 Q9BRP9 147 aa4.87□□□□□ -1.63
HDAC6-221ENST00000477561 J3QR89 54 aa4.86□□□□□ -1.63
HDAC6-221ENST00000477561 SMCR5Q8TEV8 140 aa4.86□□□□□ -1.63
HDAC6-221ENST00000477561 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
HDAC6-221ENST00000477561 PRR4Q16378 134 aa4.85□□□□□ -1.63
HDAC6-221ENST00000477561 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
HDAC6-221ENST00000477561 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
HDAC6-221ENST00000477561 LAMTOR3Q9UHA4 124 aa4.84□□□□□ -1.63
HDAC6-221ENST00000477561 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 TEX49A0A1B0GTD5 131 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 K7ERU9 68 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 ERC2-IT1O76042 136 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
HDAC6-221ENST00000477561 ZNF706Q9Y5V0 76 aaPredicted RBP4.83□□□□□ -1.64
HDAC6-221ENST00000477561 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
HDAC6-221ENST00000477561 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
HDAC6-221ENST00000477561 XP32Q5T750 250 aa4.82□□□□□ -1.64
HDAC6-221ENST00000477561 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
HDAC6-221ENST00000477561 OBSCN-AS1Q96MR7 158 aa4.82□□□□□ -1.64
HDAC6-221ENST00000477561 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
HDAC6-221ENST00000477561 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
HDAC6-221ENST00000477561 RBM3P98179 157 aaKnown RBP4.81□□□□□ -1.64
HDAC6-221ENST00000477561 Q8N377 158 aa4.81□□□□□ -1.64
HDAC6-221ENST00000477561 ST20-AS1Q8NBB2 130 aa4.81□□□□□ -1.64
HDAC6-221ENST00000477561 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
HDAC6-221ENST00000477561 F8WEM9 126 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 PDE6GP18545 87 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 SPRR1BP22528 89 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 PCP4P48539 62 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 GAGE2AQ6NT46 116 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 DSCR8Q96T75 97 aa4.8□□□□□ -1.64
HDAC6-221ENST00000477561 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
HDAC6-221ENST00000477561 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
HDAC6-221ENST00000477561 A0A1B0GV72 72 aa4.78□□□□□ -1.64
HDAC6-221ENST00000477561 ACYP1P07311 99 aa4.77□□□□□ -1.65
HDAC6-221ENST00000477561 LINC00483Q53H64 154 aa4.77□□□□□ -1.65
HDAC6-221ENST00000477561 Q8NBF4 154 aa4.77□□□□□ -1.65
HDAC6-221ENST00000477561 IGLV9-49A0A0B4J1Y8 123 aa4.76□□□□□ -1.65
HDAC6-221ENST00000477561 TRBV7-4A0A0J9YYF1 115 aa4.76□□□□□ -1.65
HDAC6-221ENST00000477561 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
HDAC6-221ENST00000477561 CCKP06307 115 aa4.76□□□□□ -1.65
HDAC6-221ENST00000477561 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
HDAC6-221ENST00000477561 MOBPQ13875 183 aa4.75□□□□□ -1.65
HDAC6-221ENST00000477561 Q6JHZ5 121 aa4.75□□□□□ -1.65
HDAC6-221ENST00000477561 Q6ZQT0 140 aa4.75□□□□□ -1.65
HDAC6-221ENST00000477561 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
HDAC6-221ENST00000477561 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
HDAC6-221ENST00000477561 IGLV7-46A0A075B6I9 117 aa4.73□□□□□ -1.65
HDAC6-221ENST00000477561 A0A1B0GW54 56 aa4.73□□□□□ -1.65
HDAC6-221ENST00000477561 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
HDAC6-221ENST00000477561 VPS25Q9BRG1 176 aa4.72□□□□□ -1.65
HDAC6-221ENST00000477561 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
HDAC6-221ENST00000477561 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
HDAC6-221ENST00000477561 SPINK1P00995 79 aa4.7□□□□□ -1.66
HDAC6-221ENST00000477561 IGFL1Q6UW32 110 aa4.7□□□□□ -1.66
HDAC6-221ENST00000477561 CDIP1Q9H305 208 aa4.7□□□□□ -1.66
HDAC6-221ENST00000477561 MUC2Q02817 5179 aa4.7□□□□□ -1.66
HDAC6-221ENST00000477561 UBL5Q9BZL1 73 aa4.69□□□□□ -1.66
HDAC6-221ENST00000477561 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
HDAC6-221ENST00000477561 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
HDAC6-221ENST00000477561 Q6Q795 121 aa4.68□□□□□ -1.66
HDAC6-221ENST00000477561 LINC00846Q9NV44 126 aa4.68□□□□□ -1.66
HDAC6-221ENST00000477561 HRCT1Q6UXD1 115 aa4.67□□□□□ -1.66
HDAC6-221ENST00000477561 LINC00643Q86TS7 51 aa4.67□□□□□ -1.66
HDAC6-221ENST00000477561 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
HDAC6-221ENST00000477561 NREPQ16612 68 aa4.65□□□□□ -1.67
HDAC6-221ENST00000477561 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms