RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 DDX60Q8IY21 1712 aaKnown RBP0.41□□□□□ -2.34
TARDBP-208ENST00000477447 IGLV5-48A0A075B6I7 105 aa0.41□□□□□ -2.34
TARDBP-208ENST00000477447 WT1-ASQ06250 92 aa0.41□□□□□ -2.34
TARDBP-208ENST00000477447 ZNF462Q96JM2 2506 aa0.41□□□□□ -2.34
TARDBP-208ENST00000477447 BPTFQ12830 3046 aa0.4□□□□□ -2.34
TARDBP-208ENST00000477447 CHD9Q3L8U1 2897 aa0.4□□□□□ -2.34
TARDBP-208ENST00000477447 CADP27708 2225 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 CACNA1CQ13936 2221 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 MMP24-AS1A0A0U1RRL7 71 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 WFDC10BQ8IUB3 73 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 S4R3F8 94 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 TNCP24821 2201 aa0.4□□□□□ -2.35
TARDBP-208ENST00000477447 PRRC2CQ9Y520 2896 aaKnown RBP0.39□□□□□ -2.35
TARDBP-208ENST00000477447 MYCBP2O75592 4640 aa0.39□□□□□ -2.35
TARDBP-208ENST00000477447 BDP1A6H8Y1 2624 aa0.39□□□□□ -2.35
TARDBP-208ENST00000477447 HECTD1Q9ULT8 2610 aa0.39□□□□□ -2.35
TARDBP-208ENST00000477447 POLR2KP53803 58 aaKnown RBP0.39□□□□□ -2.35
TARDBP-208ENST00000477447 KAAG1Q9UBP8 84 aa0.39□□□□□ -2.35
TARDBP-208ENST00000477447 GOLGA4Q13439 2230 aaKnown RBP0.39□□□□□ -2.35
TARDBP-208ENST00000477447 CNOT1A5YKK6 2376 aaKnown RBP0.39□□□□□ -2.35
TARDBP-208ENST00000477447 TENM4Q6N022 2769 aa0.39□□□□□ -2.35
TARDBP-208ENST00000477447 KNTC1P50748 2209 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 ZNF292O60281 2723 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 GPR98Q8WXG9 6306 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 CLTCL1P53675 1640 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 TTC28Q96AY4 2481 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 NAV3Q8IVL0 2385 aa0.38□□□□□ -2.35
TARDBP-208ENST00000477447 TPRP12270 2363 aaKnown RBP0.37□□□□□ -2.35
TARDBP-208ENST00000477447 H3BUA1 57 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 DEFB131AP59861 70 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 RPL39P62891 51 aaKnown RBP0.37□□□□□ -2.35
TARDBP-208ENST00000477447 DEFB106AQ8N104 65 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 CHD6Q8TD26 2715 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 TNXBP22105 4242 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 GVINP1Q7Z2Y8 2422 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 IGF2RP11717 2491 aa0.37□□□□□ -2.35
TARDBP-208ENST00000477447 ATRQ13535 2644 aa0.36□□□□□ -2.35
TARDBP-208ENST00000477447 OTOGQ6ZRI0 2925 aa0.36□□□□□ -2.35
TARDBP-208ENST00000477447 PRLHP81277 87 aa0.36□□□□□ -2.35
TARDBP-208ENST00000477447 RPL39LQ96EH5 51 aaKnown RBP0.36□□□□□ -2.35
TARDBP-208ENST00000477447 ARHGAP5-AS1Q96IT6 56 aa0.36□□□□□ -2.35
TARDBP-208ENST00000477447 SPTBN2O15020 2390 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 CACNA1HO95180 2353 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 ZNF469Q96JG9 3925 aaPredicted RBP0.35□□□□□ -2.35
TARDBP-208ENST00000477447 GCC2Q8IWJ2 1684 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 SMR3AQ99954 134 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 C2CD3Q4AC94 2353 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
TARDBP-208ENST00000477447 ABCA12Q86UK0 2595 aa0.35□□□□□ -2.35
TARDBP-208ENST00000477447 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
TARDBP-208ENST00000477447 PTPRZ1P23471 2315 aaPredicted RBP0.35□□□□□ -2.35
TARDBP-208ENST00000477447 DNAH11Q96DT5 4516 aa0.34□□□□□ -2.35
TARDBP-208ENST00000477447 SPTBN1Q01082 2364 aaKnown RBP0.34□□□□□ -2.35
TARDBP-208ENST00000477447 AHCTF1Q8WYP5 2266 aa0.34□□□□□ -2.35
TARDBP-208ENST00000477447 WNK2Q9Y3S1 2297 aa0.34□□□□□ -2.35
TARDBP-208ENST00000477447 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
TARDBP-208ENST00000477447 PRKDCP78527 4128 aaKnown RBP0.34□□□□□ -2.36
TARDBP-208ENST00000477447 LINC01590Q5TEZ4 76 aa0.34□□□□□ -2.36
TARDBP-208ENST00000477447 ABCA2Q9BZC7 2435 aa0.34□□□□□ -2.36
TARDBP-208ENST00000477447 PCNX1Q96RV3 2341 aa0.33□□□□□ -2.36
TARDBP-208ENST00000477447 A8MTW9 85 aa0.33□□□□□ -2.36
TARDBP-208ENST00000477447 LEAP2Q969E1 77 aa0.33□□□□□ -2.36
TARDBP-208ENST00000477447 F8P00451 2351 aa0.33□□□□□ -2.36
TARDBP-208ENST00000477447 FAT2Q9NYQ8 4349 aa0.33□□□□□ -2.36
TARDBP-208ENST00000477447 VPS13BQ7Z7G8 4022 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 TNRC18O15417 2968 aaPredicted RBP0.32□□□□□ -2.36
TARDBP-208ENST00000477447 CRYBG3Q68DQ2 2970 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 VWFP04275 2813 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 APCP25054 2843 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 M0QY20 66 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 TTTY10Q9BZA0 68 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 MAP1BP46821 2468 aaKnown RBP0.32□□□□□ -2.36
TARDBP-208ENST00000477447 A0A0C4DFX4 3053 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 PTPRQQ9UMZ3 2332 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 PDZD2O15018 2839 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 CREBBPQ92793 2442 aa0.32□□□□□ -2.36
TARDBP-208ENST00000477447 KMT2AQ03164 3969 aa0.31□□□□□ -2.36
TARDBP-208ENST00000477447 NOP10Q9NPE3 64 aaKnown RBP0.31□□□□□ -2.36
TARDBP-208ENST00000477447 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
TARDBP-208ENST00000477447 UBR5O95071 2799 aaPredicted RBP0.31□□□□□ -2.36
TARDBP-208ENST00000477447 SETD2Q9BYW2 2564 aaPredicted RBP0.31□□□□□ -2.36
TARDBP-208ENST00000477447 LAMA5O15230 3695 aa0.31□□□□□ -2.36
TARDBP-208ENST00000477447 NSD1Q96L73 2696 aaPredicted RBP0.31□□□□□ -2.36
TARDBP-208ENST00000477447 FLNCQ14315 2725 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 USF3Q68DE3 2245 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 M0R2T5 61 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 SPINK1P00995 79 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 PRM1P04553 51 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 PRCDQ00LT1 54 aa0.3□□□□□ -2.36
TARDBP-208ENST00000477447 DEFB135Q30KP9 77 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms