RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
COL4A5-204ENST00000477429 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
COL4A5-204ENST00000477429 SPANXCQ9NY87 97 aa4.88□□□□□ -1.63
COL4A5-204ENST00000477429 KRTAP16-1A8MUX0 517 aa4.87□□□□□ -1.63
COL4A5-204ENST00000477429 PLNP26678 52 aa4.87□□□□□ -1.63
COL4A5-204ENST00000477429 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
COL4A5-204ENST00000477429 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
COL4A5-204ENST00000477429 HSBP1O75506 76 aa4.86□□□□□ -1.63
COL4A5-204ENST00000477429 DPM2O94777 84 aa4.86□□□□□ -1.63
COL4A5-204ENST00000477429 SERF1AO75920 110 aa4.85□□□□□ -1.63
COL4A5-204ENST00000477429 IGKCP01834 107 aa4.85□□□□□ -1.63
COL4A5-204ENST00000477429 FABP4P15090 132 aa4.85□□□□□ -1.63
COL4A5-204ENST00000477429 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
COL4A5-204ENST00000477429 LINC00518Q8N0U6 118 aa4.85□□□□□ -1.63
COL4A5-204ENST00000477429 E9PLD3 99 aa4.84□□□□□ -1.63
COL4A5-204ENST00000477429 LEPROTL1O95214 131 aa4.84□□□□□ -1.63
COL4A5-204ENST00000477429 TCL1BO95988 128 aa4.84□□□□□ -1.63
COL4A5-204ENST00000477429 HERVK_113P61574 105 aa4.84□□□□□ -1.63
COL4A5-204ENST00000477429 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
COL4A5-204ENST00000477429 Q96NJ1 140 aa4.83□□□□□ -1.64
COL4A5-204ENST00000477429 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
COL4A5-204ENST00000477429 CBY1Q9Y3M2 126 aa4.83□□□□□ -1.64
COL4A5-204ENST00000477429 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
COL4A5-204ENST00000477429 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
COL4A5-204ENST00000477429 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
COL4A5-204ENST00000477429 A8MUU9 505 aa4.81□□□□□ -1.64
COL4A5-204ENST00000477429 TIMM17BO60830 172 aa4.81□□□□□ -1.64
COL4A5-204ENST00000477429 IGFL1Q6UW32 110 aa4.81□□□□□ -1.64
COL4A5-204ENST00000477429 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
COL4A5-204ENST00000477429 A0A1B0GWB2 263 aa4.8□□□□□ -1.64
COL4A5-204ENST00000477429 APOC3P02656 99 aa4.8□□□□□ -1.64
COL4A5-204ENST00000477429 TRGC2P03986 189 aa4.79□□□□□ -1.64
COL4A5-204ENST00000477429 HRES1P13985 223 aa4.79□□□□□ -1.64
COL4A5-204ENST00000477429 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
COL4A5-204ENST00000477429 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
COL4A5-204ENST00000477429 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
COL4A5-204ENST00000477429 ZNF815PA8K554 130 aa4.77□□□□□ -1.65
COL4A5-204ENST00000477429 SMIM11BQ8TCY0 68 aa4.77□□□□□ -1.65
COL4A5-204ENST00000477429 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
COL4A5-204ENST00000477429 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
COL4A5-204ENST00000477429 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
COL4A5-204ENST00000477429 A6NDN8 102 aa4.75□□□□□ -1.65
COL4A5-204ENST00000477429 DSCR10P59022 87 aa4.75□□□□□ -1.65
COL4A5-204ENST00000477429 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
COL4A5-204ENST00000477429 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
COL4A5-204ENST00000477429 OCIAD2Q56VL3 154 aa4.74□□□□□ -1.65
COL4A5-204ENST00000477429 F8WEM9 126 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 SYS1-DBNDD2H3BUS1 97 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 H3BUT2 72 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 SNAPINO95295 136 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 LINC00575Q6W349 94 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 Q6ZQY7 126 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 MUSTN1Q8IVN3 82 aa4.73□□□□□ -1.65
COL4A5-204ENST00000477429 LST1O00453 97 aa4.72□□□□□ -1.65
COL4A5-204ENST00000477429 Q6JHZ5 121 aa4.72□□□□□ -1.65
COL4A5-204ENST00000477429 SVBPQ8N300 66 aa4.72□□□□□ -1.65
COL4A5-204ENST00000477429 LINC01545Q5VT33 79 aa4.71□□□□□ -1.66
COL4A5-204ENST00000477429 Q6ZVQ6 151 aa4.71□□□□□ -1.66
COL4A5-204ENST00000477429 FAM218AQ96MZ4 157 aa4.71□□□□□ -1.66
COL4A5-204ENST00000477429 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
COL4A5-204ENST00000477429 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
COL4A5-204ENST00000477429 TRAV13-2A0A0B4J235 113 aa4.68□□□□□ -1.66
COL4A5-204ENST00000477429 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
COL4A5-204ENST00000477429 NHP2Q9NX24 153 aaKnown RBP4.68□□□□□ -1.66
COL4A5-204ENST00000477429 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
COL4A5-204ENST00000477429 IFITM1P13164 125 aa4.67□□□□□ -1.66
COL4A5-204ENST00000477429 SCGB1D4Q6XE38 83 aa4.67□□□□□ -1.66
COL4A5-204ENST00000477429 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
COL4A5-204ENST00000477429 COLCA2A8K830 154 aa4.65□□□□□ -1.67
COL4A5-204ENST00000477429 C3orf79P0CE67 100 aa4.65□□□□□ -1.67
COL4A5-204ENST00000477429 A0A087WSZ3 146 aa4.64□□□□□ -1.67
COL4A5-204ENST00000477429 NDUFA5Q16718 116 aa4.64□□□□□ -1.67
COL4A5-204ENST00000477429 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
COL4A5-204ENST00000477429 ATOH7Q8N100 152 aa4.64□□□□□ -1.67
COL4A5-204ENST00000477429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.62□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BKO60814 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BJP06899 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BOP23527 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BBP33778 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BDP58876 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BCP62807 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST2H2BEQ16778 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.61□□□□□ -1.67
COL4A5-204ENST00000477429 Q6ZVH6 145 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BHQ93079 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BNQ99877 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 HIST1H2BMQ99879 126 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 SNHG12Q9BXW3 62 aa4.61□□□□□ -1.67
COL4A5-204ENST00000477429 LINC00313P59037 77 aa4.6□□□□□ -1.67
COL4A5-204ENST00000477429 VAMP3Q15836 100 aa4.6□□□□□ -1.67
COL4A5-204ENST00000477429 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
COL4A5-204ENST00000477429 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
COL4A5-204ENST00000477429 SS18L2Q9UHA2 77 aa4.6□□□□□ -1.67
COL4A5-204ENST00000477429 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
COL4A5-204ENST00000477429 SIGMAR1Q99720 223 aa4.59□□□□□ -1.67
COL4A5-204ENST00000477429 A0A1W2PNM2 257 aa4.58□□□□□ -1.68
COL4A5-204ENST00000477429 KRTDAPP60985 99 aa4.58□□□□□ -1.68
COL4A5-204ENST00000477429 COPS9Q8WXC6 57 aa4.58□□□□□ -1.68
COL4A5-204ENST00000477429 C12orf57Q99622 126 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms