RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	CCDC141	Q6ZP82	1450 aa		0.7	□□□□□ -2.3
RBM39-231	ENST00000477334	ARHGAP35	Q9NRY4	1499 aa		0.7	□□□□□ -2.3
RBM39-231	ENST00000477334	PSENEN	Q9NZ42	101 aa		0.7	□□□□□ -2.3
RBM39-231	ENST00000477334	RABAC1	Q9UI14	185 aa		0.7	□□□□□ -2.3
RBM39-231	ENST00000477334	SPTBN1	Q01082	2364 aa	Known RBP	0.7	□□□□□ -2.3
RBM39-231	ENST00000477334	SSPO	A2VEC9	5147 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	NKTR	P30414	1462 aa	Known RBP	0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	LAMC1	P11047	1609 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	KRTAP19-3	Q7Z4W3	81 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	TJP1	Q07157	1748 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	RICTOR	Q6R327	1708 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	LRRIQ1	Q96JM4	1722 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	ANK2	Q01484	3957 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	AGL	P35573	1532 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	MROH2A	A6NES4	1674 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	C5	P01031	1676 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	PLCH1	Q4KWH8	1693 aa		0.69	□□□□□ -2.3
RBM39-231	ENST00000477334	PLXNB2	O15031	1838 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	MYO7B	Q6PIF6	2116 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	LINC00959	A0A1B0GUT2	108 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334		I3L2K1	104 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	CFD	P00746	253 aa	Predicted RBP	0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	SNRPF	P62306	86 aa	Known RBP	0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	DUOX2	Q9NRD8	1548 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	SCN11A	Q9UI33	1791 aa		0.68	□□□□□ -2.3
RBM39-231	ENST00000477334	CLTCL1	P53675	1640 aa		0.67	□□□□□ -2.3
RBM39-231	ENST00000477334	ABCA5	Q8WWZ7	1642 aa		0.67	□□□□□ -2.3
RBM39-231	ENST00000477334	PLGLA	Q15195	96 aa		0.67	□□□□□ -2.3
RBM39-231	ENST00000477334	LTN1	O94822	1766 aa		0.67	□□□□□ -2.3
RBM39-231	ENST00000477334	SRRM2	Q9UQ35	2752 aa	Known RBP	0.67	□□□□□ -2.3
RBM39-231	ENST00000477334	HFM1	A2PYH4	1435 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	NMS	Q5H8A3	153 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	USMG5	Q96IX5	58 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	S100A13	Q99584	98 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	UBE2D4	Q9Y2X8	147 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	CACNA1C	Q13936	2221 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	TSC2	P49815	1807 aa		0.66	□□□□□ -2.3
RBM39-231	ENST00000477334	ACACA	Q13085	2346 aa		0.65	□□□□□ -2.3
RBM39-231	ENST00000477334	TRRAP	Q9Y4A5	3859 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	AHNAK	Q09666	5890 aa	Known RBP	0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	QSER1	Q2KHR3	1735 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	TIAM2	Q8IVF5	1701 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	URB1	O60287	2271 aa	Known RBP	0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	KANTR	A0A1W2PQU2	76 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	SPINK1	P00995	79 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	COX6B1	P14854	86 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	LINC00643	Q86TS7	51 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	DST	Q03001	7570 aa	Known RBP	0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	ZNF831	Q5JPB2	1677 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	NHS	Q6T4R5	1651 aa		0.65	□□□□□ -2.31
RBM39-231	ENST00000477334	HECTD4	Q9Y4D8	3996 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	ITSN1	Q15811	1721 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	NRAP	Q86VF7	1730 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	CSMD3	Q7Z407	3707 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	PRH1	P02810	166 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	ACYP1	P07311	99 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	COX8A	P10176	69 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	WFDC2	Q14508	124 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334		Q5BKY6	102 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	COL14A1	Q05707	1796 aa	Known RBP	0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	PRKDC	P78527	4128 aa	Known RBP	0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	CRYBG1	Q9Y4K1	1723 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	HMCN2	Q8NDA2	5059 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	KMT2A	Q03164	3969 aa		0.64	□□□□□ -2.31
RBM39-231	ENST00000477334	KMT2D	O14686	5537 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	PKDREJ	Q9NTG1	2253 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	CFAP74	Q9C0B2	1584 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	ATP7B	P35670	1465 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	MYMX	A0A1B0GTQ4	84 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334		A0A1B0GUT8	65 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	IQCF6	A8MYZ5	107 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	IGLC2	P0DOY2	106 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	IGLC3	P0DOY3	106 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	ADIRF	Q15847	76 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	SMR3A	Q99954	134 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	UBR1	Q8IWV7	1749 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	PTPN23	Q9H3S7	1636 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	CLIP1	P30622	1438 aa		0.63	□□□□□ -2.31
RBM39-231	ENST00000477334	PPL	O60437	1756 aa		0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	LRRC37A	A6NMS7	1700 aa		0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	DEFB112	Q30KQ8	113 aa		0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	ABCA9	Q8IUA7	1624 aa		0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	TOP2A	P11388	1531 aa	Known RBP	0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	LMTK2	Q8IWU2	1503 aa		0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	RRBP1	Q9P2E9	1410 aa	Known RBP	0.62	□□□□□ -2.31
RBM39-231	ENST00000477334	NCOA2	Q15596	1464 aa		0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	LY75	O60449	1722 aa		0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	GOLGA4	Q13439	2230 aa	Known RBP	0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	CEBPZOS	A8MTT3	80 aa		0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	FXYD6	Q9H0Q3	95 aa		0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	ALS2	Q96Q42	1657 aa		0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	INO80	Q9ULG1	1556 aa	Predicted RBP	0.61	□□□□□ -2.31
RBM39-231	ENST00000477334	LYST	Q99698	3801 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334	FRAS1	Q86XX4	4008 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334	DNAJC13	O75165	2243 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334		K7EQZ3	153 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334	KRTAP2-3	P0C7H8	128 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334	DEFB109B	Q30KR1	87 aa		0.6	□□□□□ -2.31
RBM39-231	ENST00000477334		Q5VSD8	79 aa		0.6	□□□□□ -2.31

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