RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SCGB1D4Q6XE38 83 aa6.21□□□□□ -1.42
HDAC6-219ENST00000476625 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
HDAC6-219ENST00000476625 LINC00308Q8TCZ7 52 aa6.21□□□□□ -1.42
HDAC6-219ENST00000476625 CBY1Q9Y3M2 126 aa6.21□□□□□ -1.42
HDAC6-219ENST00000476625 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
HDAC6-219ENST00000476625 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
HDAC6-219ENST00000476625 IFITM1P13164 125 aa6.19□□□□□ -1.42
HDAC6-219ENST00000476625 ANKRD39Q53RE8 183 aa6.19□□□□□ -1.42
HDAC6-219ENST00000476625 SPANXCQ9NY87 97 aa6.19□□□□□ -1.42
HDAC6-219ENST00000476625 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
HDAC6-219ENST00000476625 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
HDAC6-219ENST00000476625 DLEU1O43261 78 aa6.18□□□□□ -1.42
HDAC6-219ENST00000476625 Q5XG85 94 aa6.18□□□□□ -1.42
HDAC6-219ENST00000476625 LINC00518Q8N0U6 118 aa6.18□□□□□ -1.42
HDAC6-219ENST00000476625 COX8AP10176 69 aa6.16□□□□□ -1.42
HDAC6-219ENST00000476625 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
HDAC6-219ENST00000476625 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
HDAC6-219ENST00000476625 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
HDAC6-219ENST00000476625 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
HDAC6-219ENST00000476625 PYY3Q5JQD4 70 aa6.14□□□□□ -1.43
HDAC6-219ENST00000476625 OBSCN-AS1Q96MR7 158 aa6.14□□□□□ -1.43
HDAC6-219ENST00000476625 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
HDAC6-219ENST00000476625 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
HDAC6-219ENST00000476625 MT2AP02795 61 aa6.12□□□□□ -1.43
HDAC6-219ENST00000476625 HIGD1BQ9P298 99 aa6.12□□□□□ -1.43
HDAC6-219ENST00000476625 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
HDAC6-219ENST00000476625 MT1FP04733 61 aa6.1□□□□□ -1.43
HDAC6-219ENST00000476625 CFC1P0CG37 223 aa6.1□□□□□ -1.43
HDAC6-219ENST00000476625 C14orf144Q96I85 54 aa6.1□□□□□ -1.43
HDAC6-219ENST00000476625 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
HDAC6-219ENST00000476625 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
HDAC6-219ENST00000476625 ATP11AUNQ6ZP68 121 aa6.09□□□□□ -1.43
HDAC6-219ENST00000476625 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
HDAC6-219ENST00000476625 TCL1BO95988 128 aa6.08□□□□□ -1.44
HDAC6-219ENST00000476625 Q75L30 129 aa6.08□□□□□ -1.44
HDAC6-219ENST00000476625 MUSTN1Q8IVN3 82 aa6.08□□□□□ -1.44
HDAC6-219ENST00000476625 UQCR10Q9UDW1 63 aa6.08□□□□□ -1.44
HDAC6-219ENST00000476625 A6NDN8 102 aa6.07□□□□□ -1.44
HDAC6-219ENST00000476625 TRBV7-6A0A0J9YX20 115 aa6.06□□□□□ -1.44
HDAC6-219ENST00000476625 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
HDAC6-219ENST00000476625 Q96NJ1 140 aa6.05□□□□□ -1.44
HDAC6-219ENST00000476625 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
HDAC6-219ENST00000476625 SMIM11BQ8TCY0 68 aa6.04□□□□□ -1.44
HDAC6-219ENST00000476625 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
HDAC6-219ENST00000476625 A4D1N5 150 aa6.03□□□□□ -1.44
HDAC6-219ENST00000476625 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
HDAC6-219ENST00000476625 TSTD3H0UI37 97 aa6.02□□□□□ -1.45
HDAC6-219ENST00000476625 HSD52Q0P140 79 aa6.02□□□□□ -1.45
HDAC6-219ENST00000476625 VAMP3Q15836 100 aa6.02□□□□□ -1.45
HDAC6-219ENST00000476625 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
HDAC6-219ENST00000476625 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
HDAC6-219ENST00000476625 CEND1Q8N111 149 aa6.01□□□□□ -1.45
HDAC6-219ENST00000476625 F8WEM9 126 aa6□□□□□ -1.45
HDAC6-219ENST00000476625 SNCGO76070 127 aa6□□□□□ -1.45
HDAC6-219ENST00000476625 Q6ZQY7 126 aa6□□□□□ -1.45
HDAC6-219ENST00000476625 CLEC2BQ92478 149 aa6□□□□□ -1.45
HDAC6-219ENST00000476625 RAB37Q96AX2 223 aa6□□□□□ -1.45
HDAC6-219ENST00000476625 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
HDAC6-219ENST00000476625 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
HDAC6-219ENST00000476625 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
HDAC6-219ENST00000476625 H3BUT2 72 aa5.98□□□□□ -1.45
HDAC6-219ENST00000476625 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
HDAC6-219ENST00000476625 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
HDAC6-219ENST00000476625 C12orf57Q99622 126 aa5.98□□□□□ -1.45
HDAC6-219ENST00000476625 A8MUU9 505 aa5.97□□□□□ -1.45
HDAC6-219ENST00000476625 M0R143 59 aa5.97□□□□□ -1.45
HDAC6-219ENST00000476625 BVES-AS1Q5T3Y7 98 aa5.97□□□□□ -1.45
HDAC6-219ENST00000476625 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
HDAC6-219ENST00000476625 PRO1854Q9UHT4 67 aa5.97□□□□□ -1.45
HDAC6-219ENST00000476625 TRBV20-1A0A075B6N2 111 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 H0YGX0 51 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 LST1O00453 97 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 DSCR10P59022 87 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 Q6JHZ5 121 aa5.95□□□□□ -1.46
HDAC6-219ENST00000476625 FAM236DA0A1B0GTK5 79 aa5.94□□□□□ -1.46
HDAC6-219ENST00000476625 FAM236CP0DP71 79 aa5.94□□□□□ -1.46
HDAC6-219ENST00000476625 COX6CP09669 75 aa5.93□□□□□ -1.46
HDAC6-219ENST00000476625 FXYD2P54710 66 aa5.93□□□□□ -1.46
HDAC6-219ENST00000476625 hADV29S1A0JD25 119 aa5.92□□□□□ -1.46
HDAC6-219ENST00000476625 A0A1B0GX51 115 aa5.91□□□□□ -1.46
HDAC6-219ENST00000476625 HRES1P13985 223 aa5.91□□□□□ -1.46
HDAC6-219ENST00000476625 H3BQ85 93 aa5.89□□□□□ -1.47
HDAC6-219ENST00000476625 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
HDAC6-219ENST00000476625 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
HDAC6-219ENST00000476625 PSMB2P49721 201 aa5.88□□□□□ -1.47
HDAC6-219ENST00000476625 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
HDAC6-219ENST00000476625 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
HDAC6-219ENST00000476625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-219ENST00000476625 A0A087WSZ3 146 aa5.86□□□□□ -1.47
HDAC6-219ENST00000476625 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
HDAC6-219ENST00000476625 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
HDAC6-219ENST00000476625 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
HDAC6-219ENST00000476625 SCGB1C2P0DMR2 95 aa5.84□□□□□ -1.47
HDAC6-219ENST00000476625 SIGMAR1Q99720 223 aa5.84□□□□□ -1.47
HDAC6-219ENST00000476625 DNAL4O96015 105 aa5.83□□□□□ -1.48
HDAC6-219ENST00000476625 TRIAP1O43715 76 aa5.82□□□□□ -1.48
HDAC6-219ENST00000476625 K7ERJ3 54 aa5.81□□□□□ -1.48
HDAC6-219ENST00000476625 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
HDAC6-219ENST00000476625 SS18L2Q9UHA2 77 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms