RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 IGHV3-74A0A0B4J1X5 117 aa3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 DEFB108BQ8NET1 73 aa3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 KLK12Q9UKR0 248 aa3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 NIPBLQ6KC79 2804 aaeCLIP3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 CSPG4Q6UVK1 2322 aa3.77□□□□□ -1.81
ECHDC1-215ENST00000475319 MUC4Q99102 2169 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 IGKV3-20P01619 116 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 IGHV3-11P01762 117 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 COX7A1P24310 79 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 KAAG1Q9UBP8 84 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 ADGRG4Q8IZF6 3080 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 CADP27708 2225 aa3.76□□□□□ -1.81
ECHDC1-215ENST00000475319 NF1P21359 2839 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 DEFB131BA0A096LNP1 70 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 P0C880 135 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 CMC4P56277 68 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 DSCR10P59022 87 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 Q8N9W7 124 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 SMR3AQ99954 134 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 IGLV10-54A0A075B6I4 117 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 IGLV1-50A0A075B6I6 118 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 MINOS1Q5TGZ0 78 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
ECHDC1-215ENST00000475319 ODF3BA8MYP8 253 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 K7EQZ3 153 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 ZNF861PO60384 105 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 CSNK1G2-AS1Q8NCQ2 148 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 DCHS2Q6V1P9 2916 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
ECHDC1-215ENST00000475319 MAP1AP78559 2803 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-215ENST00000475319 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
ECHDC1-215ENST00000475319 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
ECHDC1-215ENST00000475319 TLN2Q9Y4G6 2542 aa3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 A8MWP4 228 aa3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 CAMK2N2Q96S95 79 aa3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 SPENQ96T58 3664 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-215ENST00000475319 Q8N377 158 aa3.71□□□□□ -1.82
ECHDC1-215ENST00000475319 COL6A5A8TX70 2615 aa3.71□□□□□ -1.82
ECHDC1-215ENST00000475319 ATRQ13535 2644 aa3.71□□□□□ -1.82
ECHDC1-215ENST00000475319 FBN3Q75N90 2809 aa3.71□□□□□ -1.82
ECHDC1-215ENST00000475319 KRTAP24-1Q3LI83 254 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 FN1P02751 2386 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 ABCA1O95477 2261 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 ROS1P08922 2347 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 SONP18583 2426 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 A0A1B0GU69 56 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 HRES1P13985 223 aa3.7□□□□□ -1.82
ECHDC1-215ENST00000475319 CSMD1Q96PZ7 3565 aa3.69□□□□□ -1.82
ECHDC1-215ENST00000475319 STAB1Q9NY15 2570 aa3.69□□□□□ -1.82
ECHDC1-215ENST00000475319 NUPR2A6NF83 97 aa3.69□□□□□ -1.82
ECHDC1-215ENST00000475319 MAPK1IP1LQ8NDC0 245 aa3.69□□□□□ -1.82
ECHDC1-215ENST00000475319 TP53AIP1Q9HCN2 124 aa3.69□□□□□ -1.82
ECHDC1-215ENST00000475319 DNAH10OSP0CZ25 163 aa3.68□□□□□ -1.82
ECHDC1-215ENST00000475319 DEFB1P60022 68 aa3.67□□□□□ -1.82
ECHDC1-215ENST00000475319 EGFEM1PQ0D2K5 195 aa3.67□□□□□ -1.82
ECHDC1-215ENST00000475319 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
ECHDC1-215ENST00000475319 LYPD2Q6UXB3 125 aa3.67□□□□□ -1.82
ECHDC1-215ENST00000475319 IGKV3-7A0A075B6H7 116 aa3.66□□□□□ -1.82
ECHDC1-215ENST00000475319 A8MTW9 85 aa3.66□□□□□ -1.82
ECHDC1-215ENST00000475319 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-215ENST00000475319 WFDC13Q8IUB5 93 aa3.66□□□□□ -1.82
ECHDC1-215ENST00000475319 RHPN1-AS1Q9BWJ2 59 aa3.66□□□□□ -1.82
ECHDC1-215ENST00000475319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.65□□□□□ -1.822e-24■■■■■ 44.8
ECHDC1-215ENST00000475319 A8MUU9 505 aa3.65□□□□□ -1.82
ECHDC1-215ENST00000475319 H3BUA1 57 aa3.65□□□□□ -1.82
ECHDC1-215ENST00000475319 SPINK13Q1W4C9 94 aa3.65□□□□□ -1.82
ECHDC1-215ENST00000475319 KRTAP26-1Q6PEX3 210 aa3.65□□□□□ -1.82
ECHDC1-215ENST00000475319 MINOS1-NBL1R4GNA1 71 aa3.65□□□□□ -1.82
ECHDC1-215ENST00000475319 TRGV1A0A0A0MS02 117 aa3.65□□□□□ -1.83
ECHDC1-215ENST00000475319 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
ECHDC1-215ENST00000475319 INSP01308 110 aa3.65□□□□□ -1.83
ECHDC1-215ENST00000475319 WFDC10BQ8IUB3 73 aa3.65□□□□□ -1.83
ECHDC1-215ENST00000475319 USMG5Q96IX5 58 aa3.65□□□□□ -1.83
ECHDC1-215ENST00000475319 CR1P17927 2039 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 NBEAL1Q6ZS30 2694 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 MXRA5Q9NR99 2828 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 ACYP2P14621 99 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
ECHDC1-215ENST00000475319 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 HRNRQ86YZ3 2850 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 IGKV3OR2-268A0A0C4DH90 116 aa3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 A0A0J9YWU9 116 aa3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 TLX1NBP0CAT3 122 aa3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 Q5W150 140 aa3.63□□□□□ -1.83
ECHDC1-215ENST00000475319 A6NDX4 124 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms