RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 A0A0U1RQV1 116 aa13.35□□□□□ -0.27
CPNE1-223ENST00000475146 CEND1Q8N111 149 aa13.35□□□□□ -0.27
CPNE1-223ENST00000475146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-223ENST00000475146 TMEM238LA0A1B0GVL6 79 aa13.32□□□□□ -0.28
CPNE1-223ENST00000475146 A6NJY4 79 aa13.32□□□□□ -0.28
CPNE1-223ENST00000475146 MUC17Q685J3 4493 aa13.29□□□□□ -0.28
CPNE1-223ENST00000475146 FXYD2P54710 66 aa13.28□□□□□ -0.28
CPNE1-223ENST00000475146 Q5XG85 94 aa13.28□□□□□ -0.28
CPNE1-223ENST00000475146 MUC2Q02817 5179 aa13.28□□□□□ -0.28
CPNE1-223ENST00000475146 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.29
CPNE1-223ENST00000475146 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.29
CPNE1-223ENST00000475146 H0YGX0 51 aa13.26□□□□□ -0.29
CPNE1-223ENST00000475146 SNCGO76070 127 aa13.26□□□□□ -0.29
CPNE1-223ENST00000475146 ASB16-AS1Q495Z4 193 aa13.26□□□□□ -0.29
CPNE1-223ENST00000475146 Q6JHZ5 121 aa13.26□□□□□ -0.29
CPNE1-223ENST00000475146 SNHG12Q9BXW3 62 aa13.26□□□□□ -0.29
CPNE1-223ENST00000475146 SEC61BP60468 96 aaKnown RBP13.25□□□□□ -0.29
CPNE1-223ENST00000475146 OCIAD2Q56VL3 154 aa13.24□□□□□ -0.29
CPNE1-223ENST00000475146 XP32Q5T750 250 aa13.24□□□□□ -0.29
CPNE1-223ENST00000475146 IGLV8-61A0A075B6I0 122 aa13.23□□□□□ -0.29
CPNE1-223ENST00000475146 HSD52Q0P140 79 aa13.23□□□□□ -0.29
CPNE1-223ENST00000475146 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
CPNE1-223ENST00000475146 TCL1BO95988 128 aa13.22□□□□□ -0.29
CPNE1-223ENST00000475146 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
CPNE1-223ENST00000475146 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
CPNE1-223ENST00000475146 C9orf92A6NGG3 77 aa13.21□□□□□ -0.29
CPNE1-223ENST00000475146 IGFL1Q6UW32 110 aa13.21□□□□□ -0.29
CPNE1-223ENST00000475146 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
CPNE1-223ENST00000475146 H3BUT2 72 aa13.17□□□□□ -0.3
CPNE1-223ENST00000475146 TRBV7-7A0A0K0K1E9 115 aa13.15□□□□□ -0.3
CPNE1-223ENST00000475146 TRIAP1O43715 76 aa13.15□□□□□ -0.3
CPNE1-223ENST00000475146 K7ERJ3 54 aa13.14□□□□□ -0.31
CPNE1-223ENST00000475146 A0A1B0GX51 115 aa13.13□□□□□ -0.31
CPNE1-223ENST00000475146 PSMB2P49721 201 aa13.11□□□□□ -0.31
CPNE1-223ENST00000475146 NDUFV3P56181 108 aaKnown RBP13.1□□□□□ -0.31
CPNE1-223ENST00000475146 GHRHP01286 108 aa13.09□□□□□ -0.31
CPNE1-223ENST00000475146 FABP2P12104 132 aa13.08□□□□□ -0.32
CPNE1-223ENST00000475146 KRTAP4-1Q9BYQ7 146 aa13.08□□□□□ -0.32
CPNE1-223ENST00000475146 DNAL4O96015 105 aa13.04□□□□□ -0.32
CPNE1-223ENST00000475146 FAT4Q6V0I7 4981 aa13.03□□□□□ -0.32
CPNE1-223ENST00000475146 COX6CP09669 75 aa13.03□□□□□ -0.32
CPNE1-223ENST00000475146 H3BMG7 143 aa13.02□□□□□ -0.33
CPNE1-223ENST00000475146 PCOTHQ58A44 107 aa13.02□□□□□ -0.33
CPNE1-223ENST00000475146 Q6Q795 121 aa12.99□□□□□ -0.33
CPNE1-223ENST00000475146 ORMDL1Q9P0S3 153 aa12.99□□□□□ -0.33
CPNE1-223ENST00000475146 LST1O00453 97 aa12.98□□□□□ -0.33
CPNE1-223ENST00000475146 LCE2AQ5TA79 106 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-223ENST00000475146 TEN1Q86WV5 123 aa12.98□□□□□ -0.33
CPNE1-223ENST00000475146 SS18L2Q9UHA2 77 aa12.97□□□□□ -0.33
CPNE1-223ENST00000475146 H3BQ85 93 aa12.94□□□□□ -0.34
CPNE1-223ENST00000475146 A0A1B0GV72 72 aa12.93□□□□□ -0.34
CPNE1-223ENST00000475146 A0A087WSZ3 146 aa12.92□□□□□ -0.34
CPNE1-223ENST00000475146 SCGB1C2P0DMR2 95 aa12.92□□□□□ -0.34
CPNE1-223ENST00000475146 RPL37P61927 97 aaKnown RBP12.92□□□□□ -0.34
CPNE1-223ENST00000475146 TMEM256-PLSCR3K7ERE1 68 aa12.9□□□□□ -0.34
CPNE1-223ENST00000475146 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
CPNE1-223ENST00000475146 A0A1W2PNM2 257 aa12.87□□□□□ -0.35
CPNE1-223ENST00000475146 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
CPNE1-223ENST00000475146 TRACP01848 142 aa12.86□□□□□ -0.35
CPNE1-223ENST00000475146 OBSCN-AS1Q96MR7 158 aa12.86□□□□□ -0.35
CPNE1-223ENST00000475146 M0R143 59 aa12.85□□□□□ -0.35
CPNE1-223ENST00000475146 UBE2V1Q13404 147 aa12.82□□□□□ -0.36
CPNE1-223ENST00000475146 TRBV7-4A0A0J9YYF1 115 aa12.79□□□□□ -0.36
CPNE1-223ENST00000475146 Q96NJ1 140 aa12.78□□□□□ -0.36
CPNE1-223ENST00000475146 CCKP06307 115 aa12.76□□□□□ -0.37
CPNE1-223ENST00000475146 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
CPNE1-223ENST00000475146 NAA38Q9BRA0 125 aaKnown RBP12.75□□□□□ -0.37
CPNE1-223ENST00000475146 Q75L30 129 aa12.74□□□□□ -0.37
CPNE1-223ENST00000475146 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
CPNE1-223ENST00000475146 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
CPNE1-223ENST00000475146 RBM3P98179 157 aaKnown RBP12.71□□□□□ -0.37
CPNE1-223ENST00000475146 ATP11AUNQ6ZP68 121 aa12.71□□□□□ -0.37
CPNE1-223ENST00000475146 VPS25Q9BRG1 176 aa12.71□□□□□ -0.37
CPNE1-223ENST00000475146 ATXN8Q156A1 80 aa12.69□□□□□ -0.38
CPNE1-223ENST00000475146 KRTAP19-2Q3LHN2 52 aa12.69□□□□□ -0.38
CPNE1-223ENST00000475146 LCE2CQ5TA81 110 aa12.69□□□□□ -0.38
CPNE1-223ENST00000475146 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
CPNE1-223ENST00000475146 IGKV4-1P06312 121 aa12.68□□□□□ -0.38
CPNE1-223ENST00000475146 DSCR10P59022 87 aa12.66□□□□□ -0.38
CPNE1-223ENST00000475146 BATFQ16520 125 aa12.65□□□□□ -0.38
CPNE1-223ENST00000475146 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
CPNE1-223ENST00000475146 LOC105371267A0A1B0GV96 52 aa12.63□□□□□ -0.39
CPNE1-223ENST00000475146 DEFB116Q30KQ4 102 aa12.63□□□□□ -0.39
CPNE1-223ENST00000475146 LYRM7Q5U5X0 104 aa12.61□□□□□ -0.39
CPNE1-223ENST00000475146 LINC00472Q9H8W2 130 aa12.61□□□□□ -0.39
CPNE1-223ENST00000475146 A8MUU9 505 aa12.6□□□□□ -0.39
CPNE1-223ENST00000475146 C9JAW5 83 aa12.6□□□□□ -0.39
CPNE1-223ENST00000475146 LINC00313P59037 77 aa12.58□□□□□ -0.4
CPNE1-223ENST00000475146 COX6B2Q6YFQ2 88 aa12.58□□□□□ -0.4
CPNE1-223ENST00000475146 KRTAP9-2Q9BYQ4 174 aa12.58□□□□□ -0.4
CPNE1-223ENST00000475146 MT1HP80294 61 aa12.56□□□□□ -0.4
CPNE1-223ENST00000475146 JMJD7-PLA2G4BH0Y9G9 81 aa12.54□□□□□ -0.4
CPNE1-223ENST00000475146 TRBV20-1A0A075B6N2 111 aa12.52□□□□□ -0.41
CPNE1-223ENST00000475146 IGHV6-1A0A0B4J1U7 121 aa12.52□□□□□ -0.41
CPNE1-223ENST00000475146 C21orf62-AS1Q17RA5 79 aa12.52□□□□□ -0.41
CPNE1-223ENST00000475146 NOTCH2NLQ7Z3S9 236 aa12.5□□□□□ -0.41
CPNE1-223ENST00000475146 KRTAP16-1A8MUX0 517 aa12.49□□□□□ -0.41
CPNE1-223ENST00000475146 Q6ZQT0 140 aa12.48□□□□□ -0.41
CPNE1-223ENST00000475146 LOC110117498A0A087WWA1 95 aa12.47□□□□□ -0.41
CPNE1-223ENST00000475146 A0A1B0GVX0 72 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms