RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PSMB2P49721 201 aa8.78□□□□□ -1
SRRT-209ENST00000474896 ST20-AS1Q8NBB2 130 aa8.78□□□□□ -1
SRRT-209ENST00000474896 H0YGX0 51 aa8.77□□□□□ -1.01
SRRT-209ENST00000474896 SLC25A20O43772 301 aa8.77□□□□□ -1.01
SRRT-209ENST00000474896 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
SRRT-209ENST00000474896 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
SRRT-209ENST00000474896 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
SRRT-209ENST00000474896 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
SRRT-209ENST00000474896 hADV29S1A0JD25 119 aa8.75□□□□□ -1.01
SRRT-209ENST00000474896 COX6CP09669 75 aa8.74□□□□□ -1.01
SRRT-209ENST00000474896 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
SRRT-209ENST00000474896 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
SRRT-209ENST00000474896 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
SRRT-209ENST00000474896 CLEC2BQ92478 149 aa8.72□□□□□ -1.01
SRRT-209ENST00000474896 SPRR1BP22528 89 aa8.71□□□□□ -1.02
SRRT-209ENST00000474896 Q6ZQY7 126 aa8.71□□□□□ -1.02
SRRT-209ENST00000474896 DEFB105AQ8NG35 78 aa8.71□□□□□ -1.02
SRRT-209ENST00000474896 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
SRRT-209ENST00000474896 IGLV5-48A0A075B6I7 105 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 A0A1B0GX51 115 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 SNCGO76070 127 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 MOBPQ13875 183 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.7□□□□□ -1.02
SRRT-209ENST00000474896 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 Q8N377 158 aa8.7□□□□□ -1.02
SRRT-209ENST00000474896 TEX49A0A1B0GTD5 131 aa8.69□□□□□ -1.02
SRRT-209ENST00000474896 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
SRRT-209ENST00000474896 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
SRRT-209ENST00000474896 CRCT1Q9UGL9 99 aa8.67□□□□□ -1.02
SRRT-209ENST00000474896 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
SRRT-209ENST00000474896 H3BUT2 72 aa8.66□□□□□ -1.02
SRRT-209ENST00000474896 LST1O00453 97 aa8.65□□□□□ -1.02
SRRT-209ENST00000474896 COL5A1-AS1Q5SY13 56 aa8.65□□□□□ -1.02
SRRT-209ENST00000474896 XP32Q5T750 250 aa8.65□□□□□ -1.02
SRRT-209ENST00000474896 OCIAD2Q56VL3 154 aa8.64□□□□□ -1.03
SRRT-209ENST00000474896 LYRM7Q5U5X0 104 aa8.64□□□□□ -1.03
SRRT-209ENST00000474896 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
SRRT-209ENST00000474896 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
SRRT-209ENST00000474896 DNAL4O96015 105 aa8.63□□□□□ -1.03
SRRT-209ENST00000474896 TRACP01848 142 aa8.63□□□□□ -1.03
SRRT-209ENST00000474896 TCL1BO95988 128 aa8.62□□□□□ -1.03
SRRT-209ENST00000474896 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
SRRT-209ENST00000474896 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
SRRT-209ENST00000474896 PPDPFLQ8WWR9 84 aa8.62□□□□□ -1.03
SRRT-209ENST00000474896 A0A1W2PPM0 123 aa8.6□□□□□ -1.03
SRRT-209ENST00000474896 GHRHP01286 108 aa8.6□□□□□ -1.03
SRRT-209ENST00000474896 ATXN8Q156A1 80 aa8.6□□□□□ -1.03
SRRT-209ENST00000474896 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
SRRT-209ENST00000474896 TRBV20-1A0A075B6N2 111 aa8.58□□□□□ -1.04
SRRT-209ENST00000474896 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
SRRT-209ENST00000474896 F8WEM9 126 aa8.57□□□□□ -1.04
SRRT-209ENST00000474896 FABP2P12104 132 aa8.57□□□□□ -1.04
SRRT-209ENST00000474896 KRTAP19-2Q3LHN2 52 aa8.56□□□□□ -1.04
SRRT-209ENST00000474896 H3BQ85 93 aa8.55□□□□□ -1.04
SRRT-209ENST00000474896 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
SRRT-209ENST00000474896 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
SRRT-209ENST00000474896 TMEM256-PLSCR3K7ERE1 68 aa8.53□□□□□ -1.04
SRRT-209ENST00000474896 MT1HP80294 61 aa8.53□□□□□ -1.04
SRRT-209ENST00000474896 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
SRRT-209ENST00000474896 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
SRRT-209ENST00000474896 BAALC-AS2P0C853 105 aa8.51□□□□□ -1.05
SRRT-209ENST00000474896 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
SRRT-209ENST00000474896 UBE2V1Q13404 147 aa8.5□□□□□ -1.05
SRRT-209ENST00000474896 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
SRRT-209ENST00000474896 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
SRRT-209ENST00000474896 C9JAW5 83 aa8.49□□□□□ -1.05
SRRT-209ENST00000474896 H3BMG7 143 aa8.49□□□□□ -1.05
SRRT-209ENST00000474896 Q6JHZ5 121 aa8.49□□□□□ -1.05
SRRT-209ENST00000474896 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
SRRT-209ENST00000474896 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
SRRT-209ENST00000474896 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
SRRT-209ENST00000474896 A0A1B0GV72 72 aa8.46□□□□□ -1.06
SRRT-209ENST00000474896 K7EP34 96 aa8.46□□□□□ -1.06
SRRT-209ENST00000474896 CD164Q04900 197 aa8.45□□□□□ -1.06
SRRT-209ENST00000474896 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
SRRT-209ENST00000474896 H3BT86 120 aa8.43□□□□□ -1.06
SRRT-209ENST00000474896 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
SRRT-209ENST00000474896 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
SRRT-209ENST00000474896 GTF2H5Q6ZYL4 71 aa8.41□□□□□ -1.06
SRRT-209ENST00000474896 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
SRRT-209ENST00000474896 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
SRRT-209ENST00000474896 TRBV7-4A0A0J9YYF1 115 aa8.38□□□□□ -1.07
SRRT-209ENST00000474896 TRBV7-7A0A0K0K1E9 115 aa8.38□□□□□ -1.07
SRRT-209ENST00000474896 M0R2T5 61 aa8.38□□□□□ -1.07
SRRT-209ENST00000474896 Q6Q795 121 aa8.38□□□□□ -1.07
SRRT-209ENST00000474896 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
SRRT-209ENST00000474896 TEN1Q86WV5 123 aa8.37□□□□□ -1.07
SRRT-209ENST00000474896 DSCR8Q96T75 97 aa8.37□□□□□ -1.07
SRRT-209ENST00000474896 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
SRRT-209ENST00000474896 A0A1W2PNM2 257 aa8.36□□□□□ -1.07
SRRT-209ENST00000474896 Q5XG85 94 aa8.36□□□□□ -1.07
SRRT-209ENST00000474896 OBSCN-AS1Q96MR7 158 aa8.35□□□□□ -1.07
SRRT-209ENST00000474896 CCKP06307 115 aa8.34□□□□□ -1.07
SRRT-209ENST00000474896 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
SRRT-209ENST00000474896 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
SRRT-209ENST00000474896 C14orf132Q9NPU4 83 aa8.32□□□□□ -1.08
SRRT-209ENST00000474896 A0A087WSZ3 146 aa8.31□□□□□ -1.08
SRRT-209ENST00000474896 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms