RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RNF5Q99942 180 aa3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 R4GMQ9 66 aa3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 DYNC1H1Q14204 4646 aaKnown RBP3.78□□□□□ -1.8
SMARCE1-208ENST00000474246 A0A1B0GU33 70 aa3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 RPL38P63173 70 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 RPS27LQ71UM5 84 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 WFDC9Q8NEX5 89 aa3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 DNAH3Q8TD57 4116 aa3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
SMARCE1-208ENST00000474246 PLECQ15149 4684 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 KLK12Q9UKR0 248 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 ARHGAP32A7KAX9 2087 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 DNAH11Q96DT5 4516 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 CTSGP08311 255 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 ZNF137PP52743 207 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 CCL18P55774 89 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 KRTAP10-3P60369 221 aa3.76□□□□□ -1.81
SMARCE1-208ENST00000474246 IGKV3D-15A0A087WSY6 115 aa3.75□□□□□ -1.81
SMARCE1-208ENST00000474246 H0Y9P7 68 aa3.75□□□□□ -1.81
SMARCE1-208ENST00000474246 HIGD2AQ9BW72 106 aa3.75□□□□□ -1.81
SMARCE1-208ENST00000474246 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
SMARCE1-208ENST00000474246 CSMD3Q7Z407 3707 aa3.75□□□□□ -1.81
SMARCE1-208ENST00000474246 MGPP08493 103 aa3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 CCL3L1P16619 93 aa3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 PDE6GP18545 87 aa3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 Q5W150 140 aa3.74□□□□□ -1.81
SMARCE1-208ENST00000474246 STARD9Q9P2P6 4700 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 UQCR11O14957 56 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 SPINK7P58062 85 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 ARFGEF3Q5TH69 2177 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 IGKV3-20P01619 116 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 PDE6HQ13956 83 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 WFDC10AQ9H1F0 79 aa3.73□□□□□ -1.81
SMARCE1-208ENST00000474246 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-208ENST00000474246 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
SMARCE1-208ENST00000474246 DEFB116Q30KQ4 102 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 HCP5Q6MZN7 132 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 LINC00322Q6ZN03 302 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 SPRR4Q96PI1 79 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 LITAFQ99732 161 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 KLK9Q9UKQ9 250 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
SMARCE1-208ENST00000474246 SRRM2Q9UQ35 2752 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 C10orf113Q5VZT2 155 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 C9orf47Q6ZRZ4 202 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 H0YGX0 51 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 LELP1Q5T871 98 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 GAFA1Q96PS6 74 aa3.7□□□□□ -1.82
SMARCE1-208ENST00000474246 FAT2Q9NYQ8 4349 aa3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 IGKV3OR2-268A0A0C4DH90 116 aa3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 CPSF4LA6NMK7 179 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 KRTAP10-11P60412 298 aa3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 DEFB114Q30KQ6 69 aa3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 ST20-AS1Q8NBB2 130 aa3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-208ENST00000474246 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-208ENST00000474246 A0A1B0GUV1 79 aa3.68□□□□□ -1.82
SMARCE1-208ENST00000474246 RNASE3P12724 160 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-208ENST00000474246 NDPQ00604 133 aa3.68□□□□□ -1.82
SMARCE1-208ENST00000474246 NDUFA4O00483 81 aa3.67□□□□□ -1.82
SMARCE1-208ENST00000474246 MRGPRG-AS1Q2M3A8 158 aa3.67□□□□□ -1.82
SMARCE1-208ENST00000474246 LOC110117498A0A087WWA1 95 aa3.66□□□□□ -1.82
SMARCE1-208ENST00000474246 HAMPP81172 84 aa3.66□□□□□ -1.82
SMARCE1-208ENST00000474246 C4orf3Q8WVX3 66 aa3.66□□□□□ -1.82
SMARCE1-208ENST00000474246 ZNF861PO60384 105 aa3.65□□□□□ -1.82
SMARCE1-208ENST00000474246 IAPPP10997 89 aa3.65□□□□□ -1.82
SMARCE1-208ENST00000474246 DEFB112Q30KQ8 113 aa3.65□□□□□ -1.82
SMARCE1-208ENST00000474246 ARHGAP5-AS1Q96IT6 56 aa3.65□□□□□ -1.82
SMARCE1-208ENST00000474246 TRGV4A0A0C4DH28 118 aa3.65□□□□□ -1.83
SMARCE1-208ENST00000474246 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
SMARCE1-208ENST00000474246 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
SMARCE1-208ENST00000474246 IGLV3-1P01715 115 aa3.63□□□□□ -1.83
SMARCE1-208ENST00000474246 NUP214P35658 2090 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-208ENST00000474246 FXYD4P59646 89 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 COA5Q86WW8 74 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 NCR3O14931 201 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 IGKV3-15P01624 115 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 TTTY10Q9BZA0 68 aa3.62□□□□□ -1.83
SMARCE1-208ENST00000474246 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 DEFB106AQ8N104 65 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 A0A087WTM6 91 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 KCNQ1DNQ9H478 68 aa3.61□□□□□ -1.83
SMARCE1-208ENST00000474246 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
SMARCE1-208ENST00000474246 TNCP24821 2201 aa3.6□□□□□ -1.83
SMARCE1-208ENST00000474246 COX17Q14061 63 aa3.59□□□□□ -1.83
SMARCE1-208ENST00000474246 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
SMARCE1-208ENST00000474246 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
SMARCE1-208ENST00000474246 LINC01590Q5TEZ4 76 aa3.59□□□□□ -1.84
SMARCE1-208ENST00000474246 CNFNQ9BYD5 112 aa3.59□□□□□ -1.84
SMARCE1-208ENST00000474246 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
SMARCE1-208ENST00000474246 IGKV2-40A0A087WW87 121 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-208ENST00000474246 IGKV2D-40P01614 121 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms