RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 CHTF8P0CG12 524 aa9.32□□□□□ -0.92
HDAC7-219ENST00000470668 Q8NDZ9 215 aa9.32□□□□□ -0.92
HDAC7-219ENST00000470668 A8MWP4 228 aa9.31□□□□□ -0.92
HDAC7-219ENST00000470668 C8orf87E5RJ46 101 aa9.31□□□□□ -0.92
HDAC7-219ENST00000470668 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
HDAC7-219ENST00000470668 C15orf56Q8N910 161 aa9.3□□□□□ -0.92
HDAC7-219ENST00000470668 HRNRQ86YZ3 2850 aaPredicted RBP9.3□□□□□ -0.92
HDAC7-219ENST00000470668 MDFIQ99750 246 aa9.27□□□□□ -0.93
HDAC7-219ENST00000470668 Q1T7F1 81 aa9.27□□□□□ -0.93
HDAC7-219ENST00000470668 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
HDAC7-219ENST00000470668 KRTAP1-3Q8IUG1 177 aa9.25□□□□□ -0.93
HDAC7-219ENST00000470668 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
HDAC7-219ENST00000470668 DSCR10P59022 87 aa9.23□□□□□ -0.93
HDAC7-219ENST00000470668 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
HDAC7-219ENST00000470668 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
HDAC7-219ENST00000470668 HIVEP1P15822 2718 aa9.23□□□□□ -0.93
HDAC7-219ENST00000470668 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
HDAC7-219ENST00000470668 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
HDAC7-219ENST00000470668 H3BNG1 76 aa9.22□□□□□ -0.93
HDAC7-219ENST00000470668 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
HDAC7-219ENST00000470668 LCA10Q71F78 164 aa9.21□□□□□ -0.94
HDAC7-219ENST00000470668 APCP25054 2843 aa9.19□□□□□ -0.94
HDAC7-219ENST00000470668 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
HDAC7-219ENST00000470668 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
HDAC7-219ENST00000470668 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
HDAC7-219ENST00000470668 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
HDAC7-219ENST00000470668 LY6G6CO95867 125 aa9.16□□□□□ -0.94
HDAC7-219ENST00000470668 KRTAP1-1Q07627 177 aa9.16□□□□□ -0.94
HDAC7-219ENST00000470668 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
HDAC7-219ENST00000470668 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
HDAC7-219ENST00000470668 CASC10Q5T4H9 136 aa9.15□□□□□ -0.95
HDAC7-219ENST00000470668 UQCR11O14957 56 aa9.14□□□□□ -0.95
HDAC7-219ENST00000470668 DNAH10OSP0CZ25 163 aa9.14□□□□□ -0.95
HDAC7-219ENST00000470668 Q8N9P0 234 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-219ENST00000470668 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
HDAC7-219ENST00000470668 SMG1Q96Q15 3661 aaKnown RBP9.12□□□□□ -0.95
HDAC7-219ENST00000470668 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
HDAC7-219ENST00000470668 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
HDAC7-219ENST00000470668 MIR22HGQ0VDD5 57 aa9.11□□□□□ -0.95
HDAC7-219ENST00000470668 CSMD1Q96PZ7 3565 aa9.11□□□□□ -0.95
HDAC7-219ENST00000470668 NIPBLQ6KC79 2804 aaeCLIP9.1□□□□□ -0.95
HDAC7-219ENST00000470668 Q5VV11 94 aa9.1□□□□□ -0.95
HDAC7-219ENST00000470668 CUBNO60494 3623 aa9.09□□□□□ -0.95
HDAC7-219ENST00000470668 MXRA5Q9NR99 2828 aa9.09□□□□□ -0.95
HDAC7-219ENST00000470668 LINC00313P59037 77 aa9.08□□□□□ -0.96
HDAC7-219ENST00000470668 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
HDAC7-219ENST00000470668 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
HDAC7-219ENST00000470668 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
HDAC7-219ENST00000470668 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
HDAC7-219ENST00000470668 STAB2Q8WWQ8 2551 aa9.07□□□□□ -0.96
HDAC7-219ENST00000470668 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
HDAC7-219ENST00000470668 CELSR1Q9NYQ6 3014 aa9.06□□□□□ -0.96
HDAC7-219ENST00000470668 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
HDAC7-219ENST00000470668 FAM229AH3BQW9 127 aa9.02□□□□□ -0.96
HDAC7-219ENST00000470668 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.97
HDAC7-219ENST00000470668 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
HDAC7-219ENST00000470668 Q75L30 129 aa9.02□□□□□ -0.97
HDAC7-219ENST00000470668 KMT2BQ9UMN6 2715 aaPredicted RBP9.01□□□□□ -0.97
HDAC7-219ENST00000470668 SVEP1Q4LDE5 3571 aa9.01□□□□□ -0.97
HDAC7-219ENST00000470668 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
HDAC7-219ENST00000470668 NUPR2A6NF83 97 aa9□□□□□ -0.97
HDAC7-219ENST00000470668 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
HDAC7-219ENST00000470668 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
HDAC7-219ENST00000470668 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
HDAC7-219ENST00000470668 SPINK7P58062 85 aa8.96□□□□□ -0.97
HDAC7-219ENST00000470668 H3BS24 57 aa8.94□□□□□ -0.98
HDAC7-219ENST00000470668 K7EIL1 84 aa8.93□□□□□ -0.98
HDAC7-219ENST00000470668 C1orf134Q5TEV5 83 aa8.93□□□□□ -0.98
HDAC7-219ENST00000470668 Q96NJ1 140 aa8.93□□□□□ -0.98
HDAC7-219ENST00000470668 NBDYA0A0U1RRE5 68 aa8.92□□□□□ -0.98
HDAC7-219ENST00000470668 LINC01554Q52M75 96 aa8.92□□□□□ -0.98
HDAC7-219ENST00000470668 LINC01558Q9Y6Z2 57 aa8.92□□□□□ -0.98
HDAC7-219ENST00000470668 RTL8CO15255 209 aa8.91□□□□□ -0.98
HDAC7-219ENST00000470668 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
HDAC7-219ENST00000470668 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.99
HDAC7-219ENST00000470668 A8MU10 97 aa8.9□□□□□ -0.99
HDAC7-219ENST00000470668 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
HDAC7-219ENST00000470668 HRES1P13985 223 aa8.88□□□□□ -0.99
HDAC7-219ENST00000470668 SPRR1AP35321 89 aa8.86□□□□□ -0.99
HDAC7-219ENST00000470668 TENM4Q6N022 2769 aa8.85□□□□□ -0.99
HDAC7-219ENST00000470668 Q8N1X5 172 aa8.85□□□□□ -0.99
HDAC7-219ENST00000470668 ZNF861PO60384 105 aa8.84□□□□□ -0.99
HDAC7-219ENST00000470668 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
HDAC7-219ENST00000470668 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
HDAC7-219ENST00000470668 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
HDAC7-219ENST00000470668 TNP2Q05952 138 aa8.8□□□□□ -1
HDAC7-219ENST00000470668 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
HDAC7-219ENST00000470668 CSAG1Q6PB30 78 aa8.78□□□□□ -1
HDAC7-219ENST00000470668 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
HDAC7-219ENST00000470668 PLA2G1BP04054 148 aaKnown RBP8.73□□□□□ -1.01
HDAC7-219ENST00000470668 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
HDAC7-219ENST00000470668 SPENQ96T58 3664 aaKnown RBP8.72□□□□□ -1.01
HDAC7-219ENST00000470668 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
HDAC7-219ENST00000470668 A0A0D9SG42 100 aa8.7□□□□□ -1.02
HDAC7-219ENST00000470668 A0A087WTM6 91 aa8.69□□□□□ -1.02
HDAC7-219ENST00000470668 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
HDAC7-219ENST00000470668 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
HDAC7-219ENST00000470668 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
HDAC7-219ENST00000470668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.68□□□□□ -1.02
HDAC7-219ENST00000470668 FBN1P35555 2871 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms