RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SF3A3-205ENST00000470585 DEFB105AQ8NG35 78 aa3.41□□□□□ -1.86
SF3A3-205ENST00000470585 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
SF3A3-205ENST00000470585 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
SF3A3-205ENST00000470585 TRBV7-7A0A0K0K1E9 115 aa3.4□□□□□ -1.87
SF3A3-205ENST00000470585 E9PLD3 99 aa3.4□□□□□ -1.87
SF3A3-205ENST00000470585 HSBP1O75506 76 aa3.4□□□□□ -1.87
SF3A3-205ENST00000470585 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.87
SF3A3-205ENST00000470585 CLEC2BQ92478 149 aa3.4□□□□□ -1.87
SF3A3-205ENST00000470585 TRAV13-2A0A0B4J235 113 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 IGKCP01834 107 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 LITAFQ99732 161 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 RBM12B-AS1Q9P1G2 102 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 HSPB8Q9UJY1 196 aa3.39□□□□□ -1.87
SF3A3-205ENST00000470585 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
SF3A3-205ENST00000470585 LEPROTL1O95214 131 aa3.38□□□□□ -1.87
SF3A3-205ENST00000470585 IGFL1Q6UW32 110 aa3.38□□□□□ -1.87
SF3A3-205ENST00000470585 Q96NJ1 140 aa3.38□□□□□ -1.87
SF3A3-205ENST00000470585 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 FAM236DA0A1B0GTK5 79 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 SCGB1D1O95968 90 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 FAM236CP0DP71 79 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 NPC2P61916 151 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 PPDPFLQ8WWR9 84 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 SS18L2Q9UHA2 77 aa3.37□□□□□ -1.87
SF3A3-205ENST00000470585 LST1O00453 97 aa3.36□□□□□ -1.87
SF3A3-205ENST00000470585 Q6ZVH6 145 aa3.36□□□□□ -1.87
SF3A3-205ENST00000470585 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
SF3A3-205ENST00000470585 H0Y8G0 127 aa3.35□□□□□ -1.87
SF3A3-205ENST00000470585 IFITM1P13164 125 aa3.35□□□□□ -1.87
SF3A3-205ENST00000470585 A8MWP4 228 aa3.33□□□□□ -1.88
SF3A3-205ENST00000470585 VAMP3Q15836 100 aa3.33□□□□□ -1.88
SF3A3-205ENST00000470585 OCIAD2Q56VL3 154 aa3.33□□□□□ -1.88
SF3A3-205ENST00000470585 SNAPINO95295 136 aa3.32□□□□□ -1.88
SF3A3-205ENST00000470585 HRES1P13985 223 aa3.32□□□□□ -1.88
SF3A3-205ENST00000470585 A6NDN8 102 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 C9orf118A6NHY6 69 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 SVBPQ8N300 66 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 YPEL4Q96NS1 127 aa3.31□□□□□ -1.88
SF3A3-205ENST00000470585 SERF1AO75920 110 aa3.3□□□□□ -1.88
SF3A3-205ENST00000470585 NDUFA5Q16718 116 aa3.3□□□□□ -1.88
SF3A3-205ENST00000470585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.3□□□□□ -1.88
SF3A3-205ENST00000470585 LINC00575Q6W349 94 aa3.3□□□□□ -1.88
SF3A3-205ENST00000470585 SLC7A5P1Q8MH63 180 aa3.3□□□□□ -1.88
SF3A3-205ENST00000470585 PMCHL2Q9BQD1 86 aa3.3□□□□□ -1.88
SF3A3-205ENST00000470585 hADV29S1A0JD25 119 aa3.29□□□□□ -1.88
SF3A3-205ENST00000470585 Q6ZQY7 126 aa3.29□□□□□ -1.88
SF3A3-205ENST00000470585 NOTCH2NLQ7Z3S9 236 aa3.29□□□□□ -1.88
SF3A3-205ENST00000470585 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
SF3A3-205ENST00000470585 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
SF3A3-205ENST00000470585 FABP4P15090 132 aa3.28□□□□□ -1.88
SF3A3-205ENST00000470585 SNHG12Q9BXW3 62 aa3.28□□□□□ -1.88
SF3A3-205ENST00000470585 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
SF3A3-205ENST00000470585 SYS1-DBNDD2H3BUS1 97 aa3.27□□□□□ -1.89
SF3A3-205ENST00000470585 LINC00313P59037 77 aa3.27□□□□□ -1.89
SF3A3-205ENST00000470585 LINC01545Q5VT33 79 aa3.27□□□□□ -1.89
SF3A3-205ENST00000470585 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
SF3A3-205ENST00000470585 APOC3P02656 99 aa3.26□□□□□ -1.89
SF3A3-205ENST00000470585 PET117Q6UWS5 81 aa3.26□□□□□ -1.89
SF3A3-205ENST00000470585 NEBP20929 6669 aa3.25□□□□□ -1.89
SF3A3-205ENST00000470585 TRGC2P03986 189 aa3.25□□□□□ -1.89
SF3A3-205ENST00000470585 BVES-AS1Q5T3Y7 98 aa3.25□□□□□ -1.89
SF3A3-205ENST00000470585 SNCGO76070 127 aa3.24□□□□□ -1.89
SF3A3-205ENST00000470585 MUSTN1Q8IVN3 82 aa3.24□□□□□ -1.89
SF3A3-205ENST00000470585 C12orf57Q99622 126 aa3.24□□□□□ -1.89
SF3A3-205ENST00000470585 A0A087WSZ3 146 aa3.23□□□□□ -1.89
SF3A3-205ENST00000470585 COLCA2A8K830 154 aa3.23□□□□□ -1.89
SF3A3-205ENST00000470585 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
SF3A3-205ENST00000470585 DSCR10P59022 87 aa3.23□□□□□ -1.89
SF3A3-205ENST00000470585 C3orf79P0CE67 100 aa3.22□□□□□ -1.89
SF3A3-205ENST00000470585 Q8N9P0 234 aaPredicted RBP3.22□□□□□ -1.89
SF3A3-205ENST00000470585 SIGMAR1Q99720 223 aa3.22□□□□□ -1.89
SF3A3-205ENST00000470585 TTTY13Q9BZ97 58 aa3.22□□□□□ -1.89
SF3A3-205ENST00000470585 H3BUT2 72 aa3.21□□□□□ -1.9
SF3A3-205ENST00000470585 FAM218AQ96MZ4 157 aa3.21□□□□□ -1.9
SF3A3-205ENST00000470585 C8orf87E5RJ46 101 aa3.2□□□□□ -1.9
SF3A3-205ENST00000470585 SNRPEP62304 92 aaKnown RBP3.2□□□□□ -1.9
SF3A3-205ENST00000470585 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 A6NN06 94 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
SF3A3-205ENST00000470585 SPINK7P58062 85 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 ZCCHC13Q8WW36 166 aaKnown RBP3.19□□□□□ -1.9
SF3A3-205ENST00000470585 RAB37Q96AX2 223 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
SF3A3-205ENST00000470585 A0A1B0GX51 115 aa3.18□□□□□ -1.9
SF3A3-205ENST00000470585 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SF3A3-205ENST00000470585 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
SF3A3-205ENST00000470585 H0YGX0 51 aa3.17□□□□□ -1.9
SF3A3-205ENST00000470585 H3BQ85 93 aa3.17□□□□□ -1.9
SF3A3-205ENST00000470585 TMA7Q9Y2S6 64 aaKnown RBP3.17□□□□□ -1.9
SF3A3-205ENST00000470585 H3BMG7 143 aa3.16□□□□□ -1.9
SF3A3-205ENST00000470585 C21orf62-AS1Q17RA5 79 aa3.16□□□□□ -1.9
SF3A3-205ENST00000470585 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
SF3A3-205ENST00000470585 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
SF3A3-205ENST00000470585 IGHV6-1A0A0B4J1U7 121 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms