RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PRR4Q16378 134 aa5.48□□□□□ -1.53
SYNGAP1-205ENST00000470232 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
SYNGAP1-205ENST00000470232 UNQ6190/PRO20217Q6UXQ8 127 aa5.48□□□□□ -1.53
SYNGAP1-205ENST00000470232 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
SYNGAP1-205ENST00000470232 JMJD7-PLA2G4BH0Y9G9 81 aa5.47□□□□□ -1.53
SYNGAP1-205ENST00000470232 CCKP06307 115 aa5.47□□□□□ -1.53
SYNGAP1-205ENST00000470232 C10orf25Q5T742 122 aa5.47□□□□□ -1.53
SYNGAP1-205ENST00000470232 TMEM256-PLSCR3K7ERE1 68 aa5.46□□□□□ -1.54
SYNGAP1-205ENST00000470232 C6orf99Q4VX62 202 aa5.46□□□□□ -1.54
SYNGAP1-205ENST00000470232 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 C3orf22Q8N5N4 141 aa5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 Q8NDZ9 215 aa5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
SYNGAP1-205ENST00000470232 A0A096LNI7 61 aa5.44□□□□□ -1.54
SYNGAP1-205ENST00000470232 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
SYNGAP1-205ENST00000470232 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
SYNGAP1-205ENST00000470232 C9orf153Q5TBE3 101 aa5.44□□□□□ -1.54
SYNGAP1-205ENST00000470232 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
SYNGAP1-205ENST00000470232 ATOX1O00244 68 aa5.43□□□□□ -1.54
SYNGAP1-205ENST00000470232 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
SYNGAP1-205ENST00000470232 DIRC1Q969H9 104 aa5.43□□□□□ -1.54
SYNGAP1-205ENST00000470232 C6orf48Q9UBA6 75 aa5.43□□□□□ -1.54
SYNGAP1-205ENST00000470232 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 H3BQ85 93 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 ZNF561-AS1K7EIQ3 104 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 UQCRQO14949 82 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 IGLV6-57P01721 117 aa5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 HIST1H4AP62805 103 aaKnown RBP5.42□□□□□ -1.54
SYNGAP1-205ENST00000470232 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 COX7CP15954 63 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 COX7BP24311 80 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 ATP5EP2Q5VTU8 51 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 CAMK2N2Q96S95 79 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
SYNGAP1-205ENST00000470232 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.54
SYNGAP1-205ENST00000470232 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
SYNGAP1-205ENST00000470232 UBL5Q9BZL1 73 aa5.4□□□□□ -1.54
SYNGAP1-205ENST00000470232 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
SYNGAP1-205ENST00000470232 M0R378 163 aa5.39□□□□□ -1.55
SYNGAP1-205ENST00000470232 RBM3P98179 157 aaKnown RBP5.39□□□□□ -1.55
SYNGAP1-205ENST00000470232 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
SYNGAP1-205ENST00000470232 A0A087WVE0 104 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 LOC107984640A0A0U1RRK4 108 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 Q6ZQT0 140 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 Q6ZQY7 126 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
SYNGAP1-205ENST00000470232 TRBV7-6A0A0J9YX20 115 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 F8WDY8 70 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 ZNF73O43830 326 aaPredicted RBP5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 VPREB1P12018 145 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
SYNGAP1-205ENST00000470232 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 H0Y9J4 135 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 PDE6GP18545 87 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
SYNGAP1-205ENST00000470232 CRYGAP11844 174 aa5.35□□□□□ -1.55
SYNGAP1-205ENST00000470232 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
SYNGAP1-205ENST00000470232 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
SYNGAP1-205ENST00000470232 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
SYNGAP1-205ENST00000470232 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.55
SYNGAP1-205ENST00000470232 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
SYNGAP1-205ENST00000470232 NKAPP1Q8N9T2 125 aa5.33□□□□□ -1.56
SYNGAP1-205ENST00000470232 Q6ZVQ6 151 aa5.32□□□□□ -1.56
SYNGAP1-205ENST00000470232 TRBV7-4A0A0J9YYF1 115 aa5.31□□□□□ -1.56
SYNGAP1-205ENST00000470232 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
SYNGAP1-205ENST00000470232 BCE1O60756 84 aa5.3□□□□□ -1.56
SYNGAP1-205ENST00000470232 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
SYNGAP1-205ENST00000470232 LINC01547P58512 204 aaPredicted RBP5.3□□□□□ -1.56
SYNGAP1-205ENST00000470232 TMEM258P61165 79 aa5.29□□□□□ -1.56
SYNGAP1-205ENST00000470232 J3KT08 172 aa5.28□□□□□ -1.56
SYNGAP1-205ENST00000470232 CXCL6P80162 114 aa5.28□□□□□ -1.56
SYNGAP1-205ENST00000470232 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
SYNGAP1-205ENST00000470232 PRYO14603 147 aa5.27□□□□□ -1.57
SYNGAP1-205ENST00000470232 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
SYNGAP1-205ENST00000470232 KCNQ1DNQ9H478 68 aa5.27□□□□□ -1.57
SYNGAP1-205ENST00000470232 ETDCA0A1B0GVM5 59 aa5.26□□□□□ -1.57
SYNGAP1-205ENST00000470232 UBE2BP63146 152 aa5.26□□□□□ -1.57
SYNGAP1-205ENST00000470232 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
SYNGAP1-205ENST00000470232 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
SYNGAP1-205ENST00000470232 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
SYNGAP1-205ENST00000470232 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
SYNGAP1-205ENST00000470232 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
SYNGAP1-205ENST00000470232 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
SYNGAP1-205ENST00000470232 C20orf197Q8N268 126 aa5.24□□□□□ -1.57
SYNGAP1-205ENST00000470232 TYMSOSQ8TAI1 123 aa5.24□□□□□ -1.57
SYNGAP1-205ENST00000470232 ZNF861PO60384 105 aa5.23□□□□□ -1.57
SYNGAP1-205ENST00000470232 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
SYNGAP1-205ENST00000470232 NREPQ16612 68 aa5.23□□□□□ -1.57
SYNGAP1-205ENST00000470232 Q8N377 158 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms