RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 A8MUU9 505 aa9.44□□□□□ -0.9
NCKIPSD-209ENST00000470006 KRTAP6-3Q3LI67 103 aa9.44□□□□□ -0.9
NCKIPSD-209ENST00000470006 NDUFA5Q16718 116 aa9.42□□□□□ -0.9
NCKIPSD-209ENST00000470006 SVBPQ8N300 66 aa9.42□□□□□ -0.9
NCKIPSD-209ENST00000470006 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
NCKIPSD-209ENST00000470006 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
NCKIPSD-209ENST00000470006 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
NCKIPSD-209ENST00000470006 TRGC2P03986 189 aa9.41□□□□□ -0.9
NCKIPSD-209ENST00000470006 COPS9Q8WXC6 57 aa9.41□□□□□ -0.9
NCKIPSD-209ENST00000470006 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
NCKIPSD-209ENST00000470006 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
NCKIPSD-209ENST00000470006 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
NCKIPSD-209ENST00000470006 SMIM11BQ8TCY0 68 aa9.38□□□□□ -0.91
NCKIPSD-209ENST00000470006 VAMP3Q15836 100 aa9.36□□□□□ -0.91
NCKIPSD-209ENST00000470006 Q6ZQY7 126 aa9.36□□□□□ -0.91
NCKIPSD-209ENST00000470006 IFITM1P13164 125 aa9.34□□□□□ -0.91
NCKIPSD-209ENST00000470006 SYS1-DBNDD2H3BUS1 97 aa9.33□□□□□ -0.92
NCKIPSD-209ENST00000470006 hADV29S1A0JD25 119 aa9.32□□□□□ -0.92
NCKIPSD-209ENST00000470006 DSCR10P59022 87 aa9.32□□□□□ -0.92
NCKIPSD-209ENST00000470006 LINC00575Q6W349 94 aa9.32□□□□□ -0.92
NCKIPSD-209ENST00000470006 MUSTN1Q8IVN3 82 aa9.32□□□□□ -0.92
NCKIPSD-209ENST00000470006 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
NCKIPSD-209ENST00000470006 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
NCKIPSD-209ENST00000470006 SNHG12Q9BXW3 62 aa9.3□□□□□ -0.92
NCKIPSD-209ENST00000470006 H3BUT2 72 aa9.29□□□□□ -0.92
NCKIPSD-209ENST00000470006 HRES1P13985 223 aa9.28□□□□□ -0.92
NCKIPSD-209ENST00000470006 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
NCKIPSD-209ENST00000470006 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
NCKIPSD-209ENST00000470006 Q6ZVH6 145 aa9.26□□□□□ -0.93
NCKIPSD-209ENST00000470006 ANKRD39Q53RE8 183 aa9.24□□□□□ -0.93
NCKIPSD-209ENST00000470006 MTURNQ8N3F0 131 aa9.24□□□□□ -0.93
NCKIPSD-209ENST00000470006 SCGB1D1O95968 90 aa9.23□□□□□ -0.93
NCKIPSD-209ENST00000470006 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
NCKIPSD-209ENST00000470006 LINC00313P59037 77 aa9.21□□□□□ -0.94
NCKIPSD-209ENST00000470006 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.21□□□□□ -0.94
NCKIPSD-209ENST00000470006 SIGMAR1Q99720 223 aa9.21□□□□□ -0.94
NCKIPSD-209ENST00000470006 A0A087WSZ3 146 aa9.19□□□□□ -0.94
NCKIPSD-209ENST00000470006 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
NCKIPSD-209ENST00000470006 PPDPFLQ8WWR9 84 aa9.19□□□□□ -0.94
NCKIPSD-209ENST00000470006 TEN1Q86WV5 123 aa9.18□□□□□ -0.94
NCKIPSD-209ENST00000470006 NEBP20929 6669 aa9.17□□□□□ -0.94
NCKIPSD-209ENST00000470006 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-209ENST00000470006 COLCA2A8K830 154 aa9.15□□□□□ -0.94
NCKIPSD-209ENST00000470006 A8MWP4 228 aa9.14□□□□□ -0.95
NCKIPSD-209ENST00000470006 C3orf79P0CE67 100 aa9.12□□□□□ -0.95
NCKIPSD-209ENST00000470006 KRTAP20-1Q3LI63 56 aa9.11□□□□□ -0.95
NCKIPSD-209ENST00000470006 KRTDAPP60985 99 aa9.1□□□□□ -0.95
NCKIPSD-209ENST00000470006 C12orf57Q99622 126 aa9.1□□□□□ -0.95
NCKIPSD-209ENST00000470006 IGKV4-1P06312 121 aa9.09□□□□□ -0.95
NCKIPSD-209ENST00000470006 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
NCKIPSD-209ENST00000470006 ATOH7Q8N100 152 aa9.08□□□□□ -0.96
NCKIPSD-209ENST00000470006 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
NCKIPSD-209ENST00000470006 MUC12Q9UKN1 5478 aa9.03□□□□□ -0.96
NCKIPSD-209ENST00000470006 HIST1H2BKO60814 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 SNCGO76070 127 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BJP06899 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BOP23527 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BBP33778 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BDP58876 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BCP62807 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST2H2BEQ16778 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BHQ93079 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BNQ99877 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 HIST1H2BMQ99879 126 aa9.02□□□□□ -0.97
NCKIPSD-209ENST00000470006 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
NCKIPSD-209ENST00000470006 H3BMG7 143 aa9.01□□□□□ -0.97
NCKIPSD-209ENST00000470006 SPINK7P58062 85 aa8.99□□□□□ -0.97
NCKIPSD-209ENST00000470006 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
NCKIPSD-209ENST00000470006 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
NCKIPSD-209ENST00000470006 FABP2P12104 132 aa8.94□□□□□ -0.98
NCKIPSD-209ENST00000470006 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
NCKIPSD-209ENST00000470006 GHRHP01286 108 aa8.91□□□□□ -0.98
NCKIPSD-209ENST00000470006 WFDC13Q8IUB5 93 aa8.91□□□□□ -0.98
NCKIPSD-209ENST00000470006 SNRPEP62304 92 aaKnown RBP8.89□□□□□ -0.99
NCKIPSD-209ENST00000470006 A6NN06 94 aa8.87□□□□□ -0.99
NCKIPSD-209ENST00000470006 H0YGX0 51 aa8.87□□□□□ -0.99
NCKIPSD-209ENST00000470006 ANKRD29Q8N6D5 301 aa8.87□□□□□ -0.99
NCKIPSD-209ENST00000470006 FAM218AQ96MZ4 157 aa8.87□□□□□ -0.99
NCKIPSD-209ENST00000470006 A0A1B0GV72 72 aa8.86□□□□□ -0.99
NCKIPSD-209ENST00000470006 C8orf87E5RJ46 101 aa8.86□□□□□ -0.99
NCKIPSD-209ENST00000470006 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
NCKIPSD-209ENST00000470006 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
NCKIPSD-209ENST00000470006 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
NCKIPSD-209ENST00000470006 S100A1P23297 94 aa8.85□□□□□ -0.99
NCKIPSD-209ENST00000470006 A0A1B0GVX0 72 aa8.82□□□□□ -1
NCKIPSD-209ENST00000470006 HSBP1L1C9JCN9 74 aa8.82□□□□□ -1
NCKIPSD-209ENST00000470006 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
NCKIPSD-209ENST00000470006 RAB37Q96AX2 223 aa8.82□□□□□ -1
NCKIPSD-209ENST00000470006 TRACP01848 142 aa8.79□□□□□ -1
NCKIPSD-209ENST00000470006 COA6Q5JTJ3 125 aaKnown RBP8.78□□□□□ -1
NCKIPSD-209ENST00000470006 CCKP06307 115 aa8.77□□□□□ -1.01
NCKIPSD-209ENST00000470006 A0A1B0GX51 115 aa8.74□□□□□ -1.01
NCKIPSD-209ENST00000470006 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
NCKIPSD-209ENST00000470006 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
NCKIPSD-209ENST00000470006 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
NCKIPSD-209ENST00000470006 MDN1Q9NU22 5596 aa8.68□□□□□ -1.02
NCKIPSD-209ENST00000470006 DNAL4O96015 105 aa8.68□□□□□ -1.02
NCKIPSD-209ENST00000470006 KRTAP2-3P0C7H8 128 aa8.67□□□□□ -1.02
NCKIPSD-209ENST00000470006 KRTAP2-4Q9BYR9 128 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms