RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LINC00575Q6W349 94 aa6.33□□□□□ -1.4
HDAC3-204ENST00000469207 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
HDAC3-204ENST00000469207 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
HDAC3-204ENST00000469207 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-204ENST00000469207 F8WEM9 126 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 Q6ZQY7 126 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 Q6ZVH6 145 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
HDAC3-204ENST00000469207 Q75L30 129 aa6.31□□□□□ -1.4
HDAC3-204ENST00000469207 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
HDAC3-204ENST00000469207 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
HDAC3-204ENST00000469207 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
HDAC3-204ENST00000469207 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
HDAC3-204ENST00000469207 Q96NJ1 140 aa6.29□□□□□ -1.4
HDAC3-204ENST00000469207 VAMP3Q15836 100 aa6.28□□□□□ -1.4
HDAC3-204ENST00000469207 Q6JHZ5 121 aa6.28□□□□□ -1.4
HDAC3-204ENST00000469207 H3BUT2 72 aa6.27□□□□□ -1.41
HDAC3-204ENST00000469207 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
HDAC3-204ENST00000469207 C20orf202A1L168 122 aa6.26□□□□□ -1.41
HDAC3-204ENST00000469207 LST1O00453 97 aa6.25□□□□□ -1.41
HDAC3-204ENST00000469207 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-204ENST00000469207 C12orf57Q99622 126 aa6.23□□□□□ -1.41
HDAC3-204ENST00000469207 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-204ENST00000469207 SNHG12Q9BXW3 62 aa6.22□□□□□ -1.41
HDAC3-204ENST00000469207 A8MUU9 505 aa6.21□□□□□ -1.42
HDAC3-204ENST00000469207 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
HDAC3-204ENST00000469207 CFC1P0CG37 223 aa6.21□□□□□ -1.42
HDAC3-204ENST00000469207 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
HDAC3-204ENST00000469207 MT2AP02795 61 aa6.19□□□□□ -1.42
HDAC3-204ENST00000469207 DSCR10P59022 87 aa6.18□□□□□ -1.42
HDAC3-204ENST00000469207 TRBV20-1A0A075B6N2 111 aa6.17□□□□□ -1.42
HDAC3-204ENST00000469207 LCE2BO14633 110 aa6.17□□□□□ -1.42
HDAC3-204ENST00000469207 SNRPEP62304 92 aaKnown RBP6.17□□□□□ -1.42
HDAC3-204ENST00000469207 A0A087WSZ3 146 aa6.16□□□□□ -1.42
HDAC3-204ENST00000469207 BVES-AS1Q5T3Y7 98 aa6.16□□□□□ -1.42
HDAC3-204ENST00000469207 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
HDAC3-204ENST00000469207 MT1FP04733 61 aa6.15□□□□□ -1.42
HDAC3-204ENST00000469207 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.42
HDAC3-204ENST00000469207 NDUFV3P56181 108 aaKnown RBP6.14□□□□□ -1.43
HDAC3-204ENST00000469207 TEN1Q86WV5 123 aa6.14□□□□□ -1.43
HDAC3-204ENST00000469207 FAM218AQ96MZ4 157 aa6.14□□□□□ -1.43
HDAC3-204ENST00000469207 HIST1H4GQ99525 98 aa6.14□□□□□ -1.43
HDAC3-204ENST00000469207 HIST1H2BLQ99880 126 aa6.13□□□□□ -1.43
HDAC3-204ENST00000469207 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
HDAC3-204ENST00000469207 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
HDAC3-204ENST00000469207 HSBP1L1C9JCN9 74 aa6.12□□□□□ -1.43
HDAC3-204ENST00000469207 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
HDAC3-204ENST00000469207 HIST3H2BBQ8N257 126 aa6.12□□□□□ -1.43
HDAC3-204ENST00000469207 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
HDAC3-204ENST00000469207 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
HDAC3-204ENST00000469207 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
HDAC3-204ENST00000469207 A0A1W2PNM2 257 aa6.1□□□□□ -1.43
HDAC3-204ENST00000469207 H3BMG7 143 aa6.1□□□□□ -1.43
HDAC3-204ENST00000469207 KRTAP10-10P60014 251 aa6.1□□□□□ -1.43
HDAC3-204ENST00000469207 HRES1P13985 223 aa6.09□□□□□ -1.43
HDAC3-204ENST00000469207 S100A2P29034 98 aa6.08□□□□□ -1.44
HDAC3-204ENST00000469207 LINC00313P59037 77 aa6.08□□□□□ -1.44
HDAC3-204ENST00000469207 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
HDAC3-204ENST00000469207 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
HDAC3-204ENST00000469207 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
HDAC3-204ENST00000469207 FABP2P12104 132 aa6.07□□□□□ -1.44
HDAC3-204ENST00000469207 COX8AP10176 69 aa6.06□□□□□ -1.44
HDAC3-204ENST00000469207 RAB37Q96AX2 223 aa6.06□□□□□ -1.44
HDAC3-204ENST00000469207 A0A1B0GV72 72 aa6.05□□□□□ -1.44
HDAC3-204ENST00000469207 H0YGX0 51 aa6.05□□□□□ -1.44
HDAC3-204ENST00000469207 IGKV4-1P06312 121 aa6.05□□□□□ -1.44
HDAC3-204ENST00000469207 C14orf144Q96I85 54 aa6.04□□□□□ -1.44
HDAC3-204ENST00000469207 SNCGO76070 127 aa6.03□□□□□ -1.44
HDAC3-204ENST00000469207 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
HDAC3-204ENST00000469207 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
HDAC3-204ENST00000469207 A0A0B4J2C4 111 aa6.01□□□□□ -1.45
HDAC3-204ENST00000469207 IGHV6-1A0A0B4J1U7 121 aa6□□□□□ -1.45
HDAC3-204ENST00000469207 DLEU1O43261 78 aa6□□□□□ -1.45
HDAC3-204ENST00000469207 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
HDAC3-204ENST00000469207 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
HDAC3-204ENST00000469207 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
HDAC3-204ENST00000469207 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
HDAC3-204ENST00000469207 S100A6P06703 90 aa5.98□□□□□ -1.45
HDAC3-204ENST00000469207 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
HDAC3-204ENST00000469207 TRIAP1O43715 76 aa5.97□□□□□ -1.45
HDAC3-204ENST00000469207 PAM16Q9Y3D7 125 aa5.97□□□□□ -1.45
HDAC3-204ENST00000469207 A0A1B0GX51 115 aa5.96□□□□□ -1.46
HDAC3-204ENST00000469207 CEND1Q8N111 149 aa5.96□□□□□ -1.46
HDAC3-204ENST00000469207 HIGD1BQ9P298 99 aa5.96□□□□□ -1.46
HDAC3-204ENST00000469207 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.46
HDAC3-204ENST00000469207 SPATA45Q537H7 98 aa5.95□□□□□ -1.46
HDAC3-204ENST00000469207 GHRHP01286 108 aa5.94□□□□□ -1.46
HDAC3-204ENST00000469207 FXYD2P54710 66 aa5.94□□□□□ -1.46
HDAC3-204ENST00000469207 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
HDAC3-204ENST00000469207 CCKP06307 115 aa5.93□□□□□ -1.46
HDAC3-204ENST00000469207 SPINK7P58062 85 aa5.92□□□□□ -1.46
HDAC3-204ENST00000469207 ORMDL1Q9P0S3 153 aa5.92□□□□□ -1.46
HDAC3-204ENST00000469207 TRACP01848 142 aa5.91□□□□□ -1.46
HDAC3-204ENST00000469207 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
HDAC3-204ENST00000469207 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
HDAC3-204ENST00000469207 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
HDAC3-204ENST00000469207 K7ERJ3 54 aa5.89□□□□□ -1.47
HDAC3-204ENST00000469207 DNAL4O96015 105 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms