RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 OCIAD2Q56VL3 154 aa4.92□□□□□ -1.62
HDAC6-216ENST00000468949 FLG2Q5D862 2391 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-216ENST00000468949 F8WEM9 126 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 H3BQ85 93 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 LST1O00453 97 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 TRACP01848 142 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 SPRR4Q96PI1 79 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 SPCS1Q9Y6A9 102 aa4.91□□□□□ -1.62
HDAC6-216ENST00000468949 TEX49A0A1B0GTD5 131 aa4.9□□□□□ -1.63
HDAC6-216ENST00000468949 TCL1BO95988 128 aa4.9□□□□□ -1.63
HDAC6-216ENST00000468949 ST20-AS1Q8NBB2 130 aa4.9□□□□□ -1.63
HDAC6-216ENST00000468949 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
HDAC6-216ENST00000468949 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
HDAC6-216ENST00000468949 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
HDAC6-216ENST00000468949 GTF2H5Q6ZYL4 71 aa4.89□□□□□ -1.63
HDAC6-216ENST00000468949 PPDPFLQ8WWR9 84 aa4.89□□□□□ -1.63
HDAC6-216ENST00000468949 PKHD1L1Q86WI1 4243 aa4.89□□□□□ -1.63
HDAC6-216ENST00000468949 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
HDAC6-216ENST00000468949 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
HDAC6-216ENST00000468949 CRYGAP11844 174 aa4.88□□□□□ -1.63
HDAC6-216ENST00000468949 UBE2V1Q13404 147 aa4.88□□□□□ -1.63
HDAC6-216ENST00000468949 IGLV5-48A0A075B6I7 105 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 C9JAW5 83 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 TMEM256-PLSCR3K7ERE1 68 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 FAM229BQ4G0N7 80 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 LINC00483Q53H64 154 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 ANAPC11Q9NYG5 84 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
HDAC6-216ENST00000468949 H3BMG7 143 aa4.86□□□□□ -1.63
HDAC6-216ENST00000468949 K7EP34 96 aa4.86□□□□□ -1.63
HDAC6-216ENST00000468949 K7ERU9 68 aa4.86□□□□□ -1.63
HDAC6-216ENST00000468949 OXTP01178 125 aa4.86□□□□□ -1.63
HDAC6-216ENST00000468949 SPRR1BP22528 89 aa4.85□□□□□ -1.63
HDAC6-216ENST00000468949 MOBPQ13875 183 aa4.85□□□□□ -1.63
HDAC6-216ENST00000468949 Q8N377 158 aa4.85□□□□□ -1.63
HDAC6-216ENST00000468949 Q8NBF4 154 aa4.85□□□□□ -1.63
HDAC6-216ENST00000468949 TYMSOSQ8TAI1 123 aa4.85□□□□□ -1.63
HDAC6-216ENST00000468949 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
HDAC6-216ENST00000468949 BAALC-AS2P0C853 105 aa4.84□□□□□ -1.63
HDAC6-216ENST00000468949 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
HDAC6-216ENST00000468949 PRR26Q8N8Z3 221 aa4.84□□□□□ -1.63
HDAC6-216ENST00000468949 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
HDAC6-216ENST00000468949 H3BT86 120 aa4.83□□□□□ -1.64
HDAC6-216ENST00000468949 NDUFV3P56181 108 aaKnown RBP4.83□□□□□ -1.64
HDAC6-216ENST00000468949 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
HDAC6-216ENST00000468949 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
HDAC6-216ENST00000468949 MTURNQ8N3F0 131 aa4.83□□□□□ -1.64
HDAC6-216ENST00000468949 ANKRD29Q8N6D5 301 aa4.83□□□□□ -1.64
HDAC6-216ENST00000468949 A0A087X002 238 aa4.82□□□□□ -1.64
HDAC6-216ENST00000468949 LINC01600Q96MT4 127 aa4.82□□□□□ -1.64
HDAC6-216ENST00000468949 Q6JHZ5 121 aa4.81□□□□□ -1.64
HDAC6-216ENST00000468949 JMJD7-PLA2G4BH0Y9G9 81 aa4.8□□□□□ -1.64
HDAC6-216ENST00000468949 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
HDAC6-216ENST00000468949 DSCR8Q96T75 97 aa4.8□□□□□ -1.64
HDAC6-216ENST00000468949 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
HDAC6-216ENST00000468949 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
HDAC6-216ENST00000468949 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
HDAC6-216ENST00000468949 LINC00304Q8N9R0 145 aa4.79□□□□□ -1.64
HDAC6-216ENST00000468949 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
HDAC6-216ENST00000468949 F8W1H4 67 aa4.78□□□□□ -1.64
HDAC6-216ENST00000468949 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
HDAC6-216ENST00000468949 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
HDAC6-216ENST00000468949 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
HDAC6-216ENST00000468949 IGLV8-61A0A075B6I0 122 aa4.77□□□□□ -1.65
HDAC6-216ENST00000468949 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
HDAC6-216ENST00000468949 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
HDAC6-216ENST00000468949 HRCT1Q6UXD1 115 aa4.77□□□□□ -1.65
HDAC6-216ENST00000468949 IGFL1Q6UW32 110 aa4.76□□□□□ -1.65
HDAC6-216ENST00000468949 PDE6GP18545 87 aa4.75□□□□□ -1.65
HDAC6-216ENST00000468949 LIMD2Q9BT23 127 aa4.75□□□□□ -1.65
HDAC6-216ENST00000468949 C14orf132Q9NPU4 83 aa4.75□□□□□ -1.65
HDAC6-216ENST00000468949 SPINK1P00995 79 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 CCKP06307 115 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 CD164Q04900 197 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 SS18L2Q9UHA2 77 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
HDAC6-216ENST00000468949 TEN1Q86WV5 123 aa4.73□□□□□ -1.65
HDAC6-216ENST00000468949 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 SIGMAR1Q99720 223 aa4.72□□□□□ -1.65
HDAC6-216ENST00000468949 TRBV7-7A0A0K0K1E9 115 aa4.71□□□□□ -1.66
HDAC6-216ENST00000468949 Q6ZQT0 140 aa4.71□□□□□ -1.66
HDAC6-216ENST00000468949 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
HDAC6-216ENST00000468949 TNXBP22105 4242 aa4.71□□□□□ -1.66
HDAC6-216ENST00000468949 A0A087WSZ3 146 aa4.7□□□□□ -1.66
HDAC6-216ENST00000468949 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
HDAC6-216ENST00000468949 Q6Q795 121 aa4.7□□□□□ -1.66
HDAC6-216ENST00000468949 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
HDAC6-216ENST00000468949 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
HDAC6-216ENST00000468949 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
HDAC6-216ENST00000468949 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
HDAC6-216ENST00000468949 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
HDAC6-216ENST00000468949 A0A1B0GW54 56 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms