RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ST20-AS1Q8NBB2 130 aa3.58□□□□□ -1.84
USP39-213ENST00000467885 DHRS4-AS1Q9P1J3 65 aa3.58□□□□□ -1.84
USP39-213ENST00000467885 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
USP39-213ENST00000467885 A0A1B0GX51 115 aa3.57□□□□□ -1.84
USP39-213ENST00000467885 LST1O00453 97 aa3.57□□□□□ -1.84
USP39-213ENST00000467885 Q8N377 158 aa3.57□□□□□ -1.84
USP39-213ENST00000467885 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
USP39-213ENST00000467885 IGLV5-48A0A075B6I7 105 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 TRBV20-1A0A075B6N2 111 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 SLC25A20O43772 301 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 TRACP01848 142 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 FABP2P12104 132 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 Q5VSD8 79 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
USP39-213ENST00000467885 SMIM29Q86T20 159 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
USP39-213ENST00000467885 H3BMG7 143 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 BAALC-AS2P0C853 105 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 SPRR1BP22528 89 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 UBE2V1Q13404 147 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 Q6ZQY7 126 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 DEFB105AQ8NG35 78 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 LINC01600Q96MT4 127 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 SPRR4Q96PI1 79 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
USP39-213ENST00000467885 TEX49A0A1B0GTD5 131 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 A0A1B0GV90 55 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 SNCGO76070 127 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 ATXN8Q156A1 80 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 LINC00483Q53H64 154 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 SPCS1Q9Y6A9 102 aa3.54□□□□□ -1.84
USP39-213ENST00000467885 K7EP34 96 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 OCIAD2Q56VL3 154 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 GAGE2AQ6NT46 116 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 PRO0461Q9UI25 63 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 HERC2O95714 4834 aa3.53□□□□□ -1.84
USP39-213ENST00000467885 C9JAW5 83 aa3.52□□□□□ -1.85
USP39-213ENST00000467885 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
USP39-213ENST00000467885 LYRM7Q5U5X0 104 aa3.52□□□□□ -1.85
USP39-213ENST00000467885 A0A087X002 238 aa3.51□□□□□ -1.85
USP39-213ENST00000467885 H3BQ85 93 aa3.51□□□□□ -1.85
USP39-213ENST00000467885 NDUFV3P56181 108 aaKnown RBP3.51□□□□□ -1.85
USP39-213ENST00000467885 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
USP39-213ENST00000467885 PPDPFLQ8WWR9 84 aa3.51□□□□□ -1.85
USP39-213ENST00000467885 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
USP39-213ENST00000467885 ZNF706Q9Y5V0 76 aaPredicted RBP3.51□□□□□ -1.85
USP39-213ENST00000467885 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 F8W1H4 67 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 GTF2H5Q6ZYL4 71 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 C3orf22Q8N5N4 141 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 OBSCN-AS1Q96MR7 158 aa3.5□□□□□ -1.85
USP39-213ENST00000467885 DNAL4O96015 105 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 CRYGAP11844 174 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 SSBP3-AS1Q7Z2R9 100 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 MTURNQ8N3F0 131 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 ANKRD29Q8N6D5 301 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 LAMTOR3Q9UHA4 124 aa3.49□□□□□ -1.85
USP39-213ENST00000467885 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
USP39-213ENST00000467885 H3BT86 120 aa3.48□□□□□ -1.85
USP39-213ENST00000467885 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
USP39-213ENST00000467885 OXTP01178 125 aa3.47□□□□□ -1.85
USP39-213ENST00000467885 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
USP39-213ENST00000467885 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
USP39-213ENST00000467885 RBM3P98179 157 aaKnown RBP3.46□□□□□ -1.86
USP39-213ENST00000467885 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
USP39-213ENST00000467885 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
USP39-213ENST00000467885 TRBV7-4A0A0J9YYF1 115 aa3.45□□□□□ -1.86
USP39-213ENST00000467885 JMJD7-PLA2G4BH0Y9G9 81 aa3.45□□□□□ -1.86
USP39-213ENST00000467885 ETDBQ3ZM63 59 aa3.45□□□□□ -1.86
USP39-213ENST00000467885 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
USP39-213ENST00000467885 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
USP39-213ENST00000467885 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
USP39-213ENST00000467885 A0A1W2PNM2 257 aa3.44□□□□□ -1.86
USP39-213ENST00000467885 MOBPQ13875 183 aa3.44□□□□□ -1.86
USP39-213ENST00000467885 Q6JHZ5 121 aa3.44□□□□□ -1.86
USP39-213ENST00000467885 Q8NBF4 154 aa3.44□□□□□ -1.86
USP39-213ENST00000467885 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
USP39-213ENST00000467885 LOC110117498A0A087WWA1 95 aa3.43□□□□□ -1.86
USP39-213ENST00000467885 SEC61GP60059 68 aa3.43□□□□□ -1.86
USP39-213ENST00000467885 CD164Q04900 197 aa3.43□□□□□ -1.86
USP39-213ENST00000467885 Q6ZQT0 140 aa3.43□□□□□ -1.86
USP39-213ENST00000467885 TEN1Q86WV5 123 aa3.43□□□□□ -1.86
USP39-213ENST00000467885 A0A1B0GV72 72 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 F8WEM9 126 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 CCKP06307 115 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 C9orf153Q5TBE3 101 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 Q6Q795 121 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 DSCR8Q96T75 97 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 C14orf132Q9NPU4 83 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 FAT3Q8TDW7 4589 aa3.42□□□□□ -1.86
USP39-213ENST00000467885 SPINK1P00995 79 aa3.41□□□□□ -1.86
USP39-213ENST00000467885 PDE6GP18545 87 aa3.41□□□□□ -1.86
USP39-213ENST00000467885 HRCT1Q6UXD1 115 aa3.41□□□□□ -1.86
USP39-213ENST00000467885 MYCBP2O75592 4640 aa3.4□□□□□ -1.86
USP39-213ENST00000467885 TRBV7-7A0A0K0K1E9 115 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms