RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
LIMS2-212ENST00000466410 SRRM2Q9UQ35 2752 aaKnown RBP12.14□□□□□ -0.47
LIMS2-212ENST00000466410 HRCT1Q6UXD1 115 aa12.14□□□□□ -0.47
LIMS2-212ENST00000466410 APLNQ9ULZ1 77 aa12.13□□□□□ -0.47
LIMS2-212ENST00000466410 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
LIMS2-212ENST00000466410 ATP5EP56381 51 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-212ENST00000466410 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
LIMS2-212ENST00000466410 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
LIMS2-212ENST00000466410 A0A087WSZ3 146 aa12.08□□□□□ -0.48
LIMS2-212ENST00000466410 LCE6AA0A183 80 aa12.07□□□□□ -0.48
LIMS2-212ENST00000466410 UBE2AP49459 152 aa12.07□□□□□ -0.48
LIMS2-212ENST00000466410 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
LIMS2-212ENST00000466410 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-212ENST00000466410 CSMD3Q7Z407 3707 aa12.06□□□□□ -0.48
LIMS2-212ENST00000466410 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
LIMS2-212ENST00000466410 HCG22E2RYF7 251 aa12.05□□□□□ -0.48
LIMS2-212ENST00000466410 DNAH7Q8WXX0 4024 aa12.05□□□□□ -0.48
LIMS2-212ENST00000466410 LINC00474Q9P2X8 69 aa12.03□□□□□ -0.48
LIMS2-212ENST00000466410 C9orf163Q8N9P6 203 aa12.02□□□□□ -0.49
LIMS2-212ENST00000466410 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
LIMS2-212ENST00000466410 H0Y9J4 135 aa11.99□□□□□ -0.49
LIMS2-212ENST00000466410 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
LIMS2-212ENST00000466410 SPRR1BP22528 89 aa11.98□□□□□ -0.49
LIMS2-212ENST00000466410 DYNC2H1Q8NCM8 4307 aaKnown RBP11.98□□□□□ -0.49
LIMS2-212ENST00000466410 PANO1I0J062 215 aa11.98□□□□□ -0.49
LIMS2-212ENST00000466410 FAM229BQ4G0N7 80 aa11.98□□□□□ -0.49
LIMS2-212ENST00000466410 WFDC13Q8IUB5 93 aa11.98□□□□□ -0.49
LIMS2-212ENST00000466410 ZCCHC13Q8WW36 166 aaKnown RBP11.97□□□□□ -0.49
LIMS2-212ENST00000466410 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.5
LIMS2-212ENST00000466410 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
LIMS2-212ENST00000466410 B9D2Q9BPU9 175 aa11.95□□□□□ -0.5
LIMS2-212ENST00000466410 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-212ENST00000466410 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
LIMS2-212ENST00000466410 KRTAP29-1A8MX34 341 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-212ENST00000466410 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
LIMS2-212ENST00000466410 LINC00472Q9H8W2 130 aa11.88□□□□□ -0.51
LIMS2-212ENST00000466410 LINC00336Q6ZUF6 198 aa11.87□□□□□ -0.51
LIMS2-212ENST00000466410 PKIGQ9Y2B9 76 aa11.87□□□□□ -0.51
LIMS2-212ENST00000466410 MEGF8Q7Z7M0 2845 aa11.87□□□□□ -0.51
LIMS2-212ENST00000466410 PRR15Q8IV56 129 aa11.86□□□□□ -0.51
LIMS2-212ENST00000466410 MPLKIPQ8TAP9 179 aa11.86□□□□□ -0.51
LIMS2-212ENST00000466410 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-212ENST00000466410 DNHD1Q96M86 4753 aa11.86□□□□□ -0.51
LIMS2-212ENST00000466410 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
LIMS2-212ENST00000466410 A8MWP4 228 aa11.84□□□□□ -0.51
LIMS2-212ENST00000466410 CASC2Q6XLA1 102 aa11.84□□□□□ -0.51
LIMS2-212ENST00000466410 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
LIMS2-212ENST00000466410 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
LIMS2-212ENST00000466410 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
LIMS2-212ENST00000466410 SPACA4Q8TDM5 124 aa11.82□□□□□ -0.52
LIMS2-212ENST00000466410 PRR4Q16378 134 aa11.81□□□□□ -0.52
LIMS2-212ENST00000466410 MP68P56378 58 aa11.8□□□□□ -0.52
LIMS2-212ENST00000466410 LINC00208Q96KT6 92 aa11.79□□□□□ -0.52
LIMS2-212ENST00000466410 IGLV9-49A0A0B4J1Y8 123 aa11.78□□□□□ -0.52
LIMS2-212ENST00000466410 TRAV22A0A0B4J277 110 aa11.76□□□□□ -0.53
LIMS2-212ENST00000466410 VPS13DQ5THJ4 4388 aa11.75□□□□□ -0.53
LIMS2-212ENST00000466410 A0A087WTM6 91 aa11.75□□□□□ -0.53
LIMS2-212ENST00000466410 H0Y9P7 68 aa11.75□□□□□ -0.53
LIMS2-212ENST00000466410 NDUFB1O75438 58 aa11.75□□□□□ -0.53
LIMS2-212ENST00000466410 CYP4F30PQ9H0H9 118 aa11.74□□□□□ -0.53
LIMS2-212ENST00000466410 MMP24-AS1A0A0U1RRL7 71 aa11.72□□□□□ -0.53
LIMS2-212ENST00000466410 PRO0628Q9UI54 55 aa11.72□□□□□ -0.53
LIMS2-212ENST00000466410 Q96NJ1 140 aa11.71□□□□□ -0.54
LIMS2-212ENST00000466410 LINC00483Q53H64 154 aa11.69□□□□□ -0.54
LIMS2-212ENST00000466410 RTL8CO15255 209 aa11.68□□□□□ -0.54
LIMS2-212ENST00000466410 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
LIMS2-212ENST00000466410 HECTD4Q9Y4D8 3996 aa11.67□□□□□ -0.54
LIMS2-212ENST00000466410 H3BPC8 53 aa11.66□□□□□ -0.54
LIMS2-212ENST00000466410 MOBPQ13875 183 aa11.66□□□□□ -0.54
LIMS2-212ENST00000466410 ANAPC11Q9NYG5 84 aa11.65□□□□□ -0.54
LIMS2-212ENST00000466410 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.55
LIMS2-212ENST00000466410 BRK1Q8WUW1 75 aa11.65□□□□□ -0.55
LIMS2-212ENST00000466410 WWC2-AS2Q96NR7 200 aa11.65□□□□□ -0.55
LIMS2-212ENST00000466410 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
LIMS2-212ENST00000466410 Q1T7F1 81 aa11.62□□□□□ -0.55
LIMS2-212ENST00000466410 ZNF706Q9Y5V0 76 aaPredicted RBP11.62□□□□□ -0.55
LIMS2-212ENST00000466410 FRAS1Q86XX4 4008 aa11.61□□□□□ -0.55
LIMS2-212ENST00000466410 DNAH8Q96JB1 4490 aa11.61□□□□□ -0.55
LIMS2-212ENST00000466410 PLAC8Q9NZF1 115 aa11.61□□□□□ -0.55
LIMS2-212ENST00000466410 Q6ZR54 194 aa11.6□□□□□ -0.55
LIMS2-212ENST00000466410 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
LIMS2-212ENST00000466410 DNAH2Q9P225 4427 aa11.6□□□□□ -0.55
LIMS2-212ENST00000466410 TGP01266 2768 aa11.6□□□□□ -0.55
LIMS2-212ENST00000466410 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
LIMS2-212ENST00000466410 FBN3Q75N90 2809 aa11.58□□□□□ -0.55
LIMS2-212ENST00000466410 ZNF861PO60384 105 aa11.58□□□□□ -0.56
LIMS2-212ENST00000466410 DNAH17Q9UFH2 4485 aa11.58□□□□□ -0.56
LIMS2-212ENST00000466410 C8orf17Q9NRJ1 99 aa11.58□□□□□ -0.56
LIMS2-212ENST00000466410 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
LIMS2-212ENST00000466410 A0A1B0GVX0 72 aa11.54□□□□□ -0.56
LIMS2-212ENST00000466410 PSPHP1O15172 72 aa11.53□□□□□ -0.56
LIMS2-212ENST00000466410 TP53AIP1Q9HCN2 124 aa11.51□□□□□ -0.57
LIMS2-212ENST00000466410 A0A087X002 238 aa11.49□□□□□ -0.57
LIMS2-212ENST00000466410 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
LIMS2-212ENST00000466410 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
LIMS2-212ENST00000466410 NDUFS5O43920 106 aa11.48□□□□□ -0.57
LIMS2-212ENST00000466410 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
LIMS2-212ENST00000466410 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
LIMS2-212ENST00000466410 IGLV7-46A0A075B6I9 117 aa11.45□□□□□ -0.58
LIMS2-212ENST00000466410 IGLV7-43P04211 117 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms