RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 NREPQ16612 68 aa4.8□□□□□ -1.64
RPUSD3-212ENST00000466141 FAM104AQ969W3 186 aa4.8□□□□□ -1.64
RPUSD3-212ENST00000466141 TRBV6-4A0A1B0GX49 114 aa4.79□□□□□ -1.64
RPUSD3-212ENST00000466141 LINC00315P59091 139 aa4.79□□□□□ -1.64
RPUSD3-212ENST00000466141 HAMPP81172 84 aa4.79□□□□□ -1.64
RPUSD3-212ENST00000466141 RPL36AP83881 106 aaKnown RBP4.79□□□□□ -1.64
RPUSD3-212ENST00000466141 LYZL1Q6UWQ5 148 aa4.79□□□□□ -1.64
RPUSD3-212ENST00000466141 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
RPUSD3-212ENST00000466141 REG3GQ6UW15 175 aa4.78□□□□□ -1.64
RPUSD3-212ENST00000466141 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 FAM74A4Q5TZK3 123 aa4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 C14orf178Q8N769 122 aaPredicted RBP4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 AMELXQ99217 191 aa4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 C22orf24Q9Y442 160 aa4.77□□□□□ -1.65
RPUSD3-212ENST00000466141 A8MU10 97 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 NDUFB1O75438 58 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 CHTF8P0CG12 524 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 WFDC10BQ8IUB3 73 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 C20orf203Q8NBC4 194 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
RPUSD3-212ENST00000466141 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 TRBV10-1A0A0K0K1A3 114 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 H0YGX0 51 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 MIAQ16674 131 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
RPUSD3-212ENST00000466141 M0QY20 66 aa4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 CRPP02741 224 aa4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 ROMO1P60602 79 aa4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 LELP1Q5T871 98 aa4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 Q6ZRN7 208 aaPredicted RBP4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 C14orf132Q9NPU4 83 aa4.74□□□□□ -1.65
RPUSD3-212ENST00000466141 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
RPUSD3-212ENST00000466141 TRBV6-5A0A0K0K1A5 114 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 LRCOL1A6NCL2 159 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 RPL37AP8A6NKH3 93 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 PRR4Q16378 134 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 C10orf25Q5T742 122 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 Q9BRP9 147 aa4.72□□□□□ -1.65
RPUSD3-212ENST00000466141 K7ERS5 55 aa4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 BPY2O14599 106 aa4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 MGPP08493 103 aa4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 PDE6GP18545 87 aa4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 Q8N3U1 123 aa4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
RPUSD3-212ENST00000466141 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
RPUSD3-212ENST00000466141 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
RPUSD3-212ENST00000466141 IGLV4-69A0A075B6H9 119 aa4.69□□□□□ -1.66
RPUSD3-212ENST00000466141 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
RPUSD3-212ENST00000466141 LINC01547P58512 204 aaPredicted RBP4.69□□□□□ -1.66
RPUSD3-212ENST00000466141 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
RPUSD3-212ENST00000466141 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 A0A087WTM6 91 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 GAS8-AS1O95177 125 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 NTM-AS1Q6ZSK4 140 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 Q8NDZ9 215 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 LITAFQ99732 161 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 CHCHD7Q9BUK0 85 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
RPUSD3-212ENST00000466141 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
RPUSD3-212ENST00000466141 C2orf66Q6UXQ4 117 aa4.67□□□□□ -1.66
RPUSD3-212ENST00000466141 RPL39LQ96EH5 51 aaKnown RBP4.67□□□□□ -1.66
RPUSD3-212ENST00000466141 ZNF625Q96I27 306 aaPredicted RBP4.67□□□□□ -1.66
RPUSD3-212ENST00000466141 SMIM1B2RUZ4 78 aa4.66□□□□□ -1.66
RPUSD3-212ENST00000466141 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
RPUSD3-212ENST00000466141 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
RPUSD3-212ENST00000466141 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
RPUSD3-212ENST00000466141 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 H3BQ85 93 aa4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.67
RPUSD3-212ENST00000466141 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 Q6ZQT0 140 aa4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 ZCCHC13Q8WW36 166 aaKnown RBP4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 HIGD2AQ9BW72 106 aa4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
RPUSD3-212ENST00000466141 LOC110117498A0A087WWA1 95 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 CNBPP62633 177 aaKnown RBP4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 RNASE13Q5GAN3 156 aaKnown RBP4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 MIR7-3HGQ8N6C7 128 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 PRR34Q9NV39 138 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 DHRS4-AS1Q9P1J3 65 aa4.63□□□□□ -1.67
RPUSD3-212ENST00000466141 IGLV8-61A0A075B6I0 122 aa4.62□□□□□ -1.67
RPUSD3-212ENST00000466141 A0A087WSZ3 146 aa4.62□□□□□ -1.67
RPUSD3-212ENST00000466141 ANGP03950 147 aaKnown RBP4.62□□□□□ -1.67
RPUSD3-212ENST00000466141 SPAG11BQ08648 103 aa4.62□□□□□ -1.67
RPUSD3-212ENST00000466141 SPAG11AQ6PDA7 123 aa4.62□□□□□ -1.67
RPUSD3-212ENST00000466141 IGLV4-60A0A075B6I1 120 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms